Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0615:02375
Extra
PDB:
ATOM 1 O3' U A 614 45.817 102.010 92.694 1.00 31.94 O
ATOM 2 P G A 615 45.234 103.415 92.186 1.00 32.76 P
ATOM 3 OP1 G A 615 43.932 103.174 91.533 1.00 33.39 O
ATOM 4 OP2 G A 615 46.299 104.099 91.434 1.00 34.92 O
ATOM 5 O5' G A 615 44.985 104.239 93.520 1.00 30.94 O
ATOM 6 C5' G A 615 43.991 103.831 94.463 1.00 29.85 C
ATOM 7 C4' G A 615 44.237 104.511 95.780 1.00 31.94 C
ATOM 8 O4' G A 615 45.522 104.080 96.296 1.00 32.25 O
ATOM 9 C3' G A 615 44.342 106.028 95.719 1.00 31.30 C
ATOM 10 O3' G A 615 43.044 106.628 95.783 1.00 32.57 O
ATOM 11 C2' G A 615 45.167 106.332 96.963 1.00 30.97 C
ATOM 12 O2' G A 615 44.388 106.287 98.139 1.00 29.56 O
ATOM 13 C1' G A 615 46.145 105.154 96.977 1.00 32.39 C
ATOM 14 N9 G A 615 47.424 105.434 96.325 1.00 35.10 N
ATOM 15 C8 G A 615 47.702 105.390 94.979 1.00 35.79 C
ATOM 16 N7 G A 615 48.933 105.712 94.701 1.00 33.74 N
ATOM 17 C5 G A 615 49.504 105.980 95.932 1.00 33.02 C
ATOM 18 C6 G A 615 50.807 106.373 96.255 1.00 33.73 C
ATOM 19 O6 G A 615 51.757 106.569 95.492 1.00 35.26 O
ATOM 20 N1 G A 615 50.968 106.533 97.626 1.00 33.99 N
ATOM 21 C2 G A 615 49.988 106.336 98.564 1.00 33.97 C
ATOM 22 N2 G A 615 50.327 106.537 99.843 1.00 33.07 N
ATOM 23 N3 G A 615 48.762 105.967 98.270 1.00 34.53 N
ATOM 24 C4 G A 615 48.590 105.807 96.945 1.00 33.92 C
TER
ATOM 1 O3' C B2374 54.159 106.450 98.864 1.00 36.76 O
ATOM 2 P C B2375 54.633 107.698 97.975 1.00 39.53 P
ATOM 3 OP1 C B2375 53.713 107.831 96.822 1.00 37.57 O
ATOM 4 OP2 C B2375 56.094 107.576 97.741 1.00 39.40 O
ATOM 5 O5' C B2375 54.391 108.947 98.917 1.00 38.00 O
ATOM 6 C5' C B2375 53.072 109.408 99.188 1.00 38.19 C
ATOM 7 C4' C B2375 53.131 110.809 99.713 1.00 38.86 C
ATOM 8 O4' C B2375 53.828 110.817 100.987 1.00 41.08 O
ATOM 9 C3' C B2375 53.941 111.754 98.853 1.00 38.90 C
ATOM 10 O3' C B2375 53.166 112.216 97.760 1.00 38.99 O
ATOM 11 C2' C B2375 54.305 112.838 99.855 1.00 40.71 C
ATOM 12 O2' C B2375 53.205 113.671 100.163 1.00 40.09 O
ATOM 13 C1' C B2375 54.610 111.996 101.096 1.00 41.99 C
ATOM 14 N1 C B2375 56.034 111.614 101.225 1.00 44.60 N
ATOM 15 C2 C B2375 56.948 112.547 101.760 1.00 47.84 C
ATOM 16 O2 C B2375 56.536 113.667 102.122 1.00 50.70 O
ATOM 17 N3 C B2375 58.257 112.203 101.868 1.00 47.78 N
ATOM 18 C4 C B2375 58.664 110.993 101.473 1.00 46.43 C
ATOM 19 N4 C B2375 59.963 110.697 101.599 1.00 46.21 N
ATOM 20 C5 C B2375 57.760 110.032 100.932 1.00 45.60 C
ATOM 21 C6 C B2375 56.469 110.380 100.828 1.00 44.96 C
ATOM 22 P U B2376 53.799 112.245 96.288 1.00 37.75 P
ATOM 23 OP1 U B2376 52.673 112.456 95.356 1.00 39.42 O
ATOM 24 OP2 U B2376 54.640 111.047 96.142 1.00 38.51 O
ATOM 25 O5' U B2376 54.701 113.562 96.282 1.00 39.26 O
TER
ATOM 2 P G A 615 45.234 103.415 92.186 1.00 32.76 P
ATOM 3 OP1 G A 615 43.932 103.174 91.533 1.00 33.39 O
ATOM 4 OP2 G A 615 46.299 104.099 91.434 1.00 34.92 O
ATOM 5 O5' G A 615 44.985 104.239 93.520 1.00 30.94 O
ATOM 6 C5' G A 615 43.991 103.831 94.463 1.00 29.85 C
ATOM 7 C4' G A 615 44.237 104.511 95.780 1.00 31.94 C
ATOM 8 O4' G A 615 45.522 104.080 96.296 1.00 32.25 O
ATOM 9 C3' G A 615 44.342 106.028 95.719 1.00 31.30 C
ATOM 10 O3' G A 615 43.044 106.628 95.783 1.00 32.57 O
ATOM 11 C2' G A 615 45.167 106.332 96.963 1.00 30.97 C
ATOM 12 O2' G A 615 44.388 106.287 98.139 1.00 29.56 O
ATOM 13 C1' G A 615 46.145 105.154 96.977 1.00 32.39 C
ATOM 14 N9 G A 615 47.424 105.434 96.325 1.00 35.10 N
ATOM 15 C8 G A 615 47.702 105.390 94.979 1.00 35.79 C
ATOM 16 N7 G A 615 48.933 105.712 94.701 1.00 33.74 N
ATOM 17 C5 G A 615 49.504 105.980 95.932 1.00 33.02 C
ATOM 18 C6 G A 615 50.807 106.373 96.255 1.00 33.73 C
ATOM 19 O6 G A 615 51.757 106.569 95.492 1.00 35.26 O
ATOM 20 N1 G A 615 50.968 106.533 97.626 1.00 33.99 N
ATOM 21 C2 G A 615 49.988 106.336 98.564 1.00 33.97 C
ATOM 22 N2 G A 615 50.327 106.537 99.843 1.00 33.07 N
ATOM 23 N3 G A 615 48.762 105.967 98.270 1.00 34.53 N
ATOM 24 C4 G A 615 48.590 105.807 96.945 1.00 33.92 C
TER
ATOM 1 O3' C B2374 54.159 106.450 98.864 1.00 36.76 O
ATOM 2 P C B2375 54.633 107.698 97.975 1.00 39.53 P
ATOM 3 OP1 C B2375 53.713 107.831 96.822 1.00 37.57 O
ATOM 4 OP2 C B2375 56.094 107.576 97.741 1.00 39.40 O
ATOM 5 O5' C B2375 54.391 108.947 98.917 1.00 38.00 O
ATOM 6 C5' C B2375 53.072 109.408 99.188 1.00 38.19 C
ATOM 7 C4' C B2375 53.131 110.809 99.713 1.00 38.86 C
ATOM 8 O4' C B2375 53.828 110.817 100.987 1.00 41.08 O
ATOM 9 C3' C B2375 53.941 111.754 98.853 1.00 38.90 C
ATOM 10 O3' C B2375 53.166 112.216 97.760 1.00 38.99 O
ATOM 11 C2' C B2375 54.305 112.838 99.855 1.00 40.71 C
ATOM 12 O2' C B2375 53.205 113.671 100.163 1.00 40.09 O
ATOM 13 C1' C B2375 54.610 111.996 101.096 1.00 41.99 C
ATOM 14 N1 C B2375 56.034 111.614 101.225 1.00 44.60 N
ATOM 15 C2 C B2375 56.948 112.547 101.760 1.00 47.84 C
ATOM 16 O2 C B2375 56.536 113.667 102.122 1.00 50.70 O
ATOM 17 N3 C B2375 58.257 112.203 101.868 1.00 47.78 N
ATOM 18 C4 C B2375 58.664 110.993 101.473 1.00 46.43 C
ATOM 19 N4 C B2375 59.963 110.697 101.599 1.00 46.21 N
ATOM 20 C5 C B2375 57.760 110.032 100.932 1.00 45.60 C
ATOM 21 C6 C B2375 56.469 110.380 100.828 1.00 44.96 C
ATOM 22 P U B2376 53.799 112.245 96.288 1.00 37.75 P
ATOM 23 OP1 U B2376 52.673 112.456 95.356 1.00 39.42 O
ATOM 24 OP2 U B2376 54.640 111.047 96.142 1.00 38.51 O
ATOM 25 O5' U B2376 54.701 113.562 96.282 1.00 39.26 O
TER
Atoms:
OP1: (43.932,103.174,91.533)
OP2: (46.299,104.099,91.434)
C3': (44.342,106.028,95.719)
C1': (46.145,105.154,96.977)
C5': (43.991,103.831,94.463)
O6: (51.757,106.569,95.492)
O4': (45.522,104.080,96.296)
C8: (47.702,105.390,94.979)
C2: (49.988,106.336,98.564)
C6: (50.807,106.373,96.255)
C5: (49.504,105.980,95.932)
C4: (48.590,105.807,96.945)
P: (45.234,103.415,92.186)
C4': (44.237,104.511,95.780)
C2': (45.167,106.332,96.963)
O2': (44.388,106.287,98.139)
N1: (50.968,106.533,97.626)
N2: (50.327,106.537,99.843)
N3: (48.762,105.967,98.270)
N7: (48.933,105.712,94.701)
N9: (47.424,105.434,96.325)
O5': (44.985,104.239,93.520)
O3': (43.044,106.628,95.783)
OP2: (46.299,104.099,91.434)
C3': (44.342,106.028,95.719)
C1': (46.145,105.154,96.977)
C5': (43.991,103.831,94.463)
O6: (51.757,106.569,95.492)
O4': (45.522,104.080,96.296)
C8: (47.702,105.390,94.979)
C2: (49.988,106.336,98.564)
C6: (50.807,106.373,96.255)
C5: (49.504,105.980,95.932)
C4: (48.590,105.807,96.945)
P: (45.234,103.415,92.186)
C4': (44.237,104.511,95.780)
C2': (45.167,106.332,96.963)
O2': (44.388,106.287,98.139)
N1: (50.968,106.533,97.626)
N2: (50.327,106.537,99.843)
N3: (48.762,105.967,98.270)
N7: (48.933,105.712,94.701)
N9: (47.424,105.434,96.325)
O5': (44.985,104.239,93.520)
O3': (43.044,106.628,95.783)
C2: (56.948,112.547,101.760)
OP1: (53.713,107.831,96.822)
OP2: (56.094,107.576,97.741)
C4: (58.664,110.993,101.473)
O5': (54.391,108.947,98.917)
C3': (53.941,111.754,98.853)
C1': (54.610,111.996,101.096)
O4': (53.828,110.817,100.987)
C5': (53.072,109.408,99.188)
P: (54.633,107.698,97.975)
O2: (56.536,113.667,102.122)
C4': (53.131,110.809,99.713)
C2': (54.305,112.838,99.855)
O2': (53.205,113.671,100.163)
N1: (56.034,111.614,101.225)
N3: (58.257,112.203,101.868)
N4: (59.963,110.697,101.599)
C6: (56.469,110.380,100.828)
C5: (57.760,110.032,100.932)
O3': (53.166,112.216,97.760)
OP1: (53.713,107.831,96.822)
OP2: (56.094,107.576,97.741)
C4: (58.664,110.993,101.473)
O5': (54.391,108.947,98.917)
C3': (53.941,111.754,98.853)
C1': (54.610,111.996,101.096)
O4': (53.828,110.817,100.987)
C5': (53.072,109.408,99.188)
P: (54.633,107.698,97.975)
O2: (56.536,113.667,102.122)
C4': (53.131,110.809,99.713)
C2': (54.305,112.838,99.855)
O2': (53.205,113.671,100.163)
N1: (56.034,111.614,101.225)
N3: (58.257,112.203,101.868)
N4: (59.963,110.697,101.599)
C6: (56.469,110.380,100.828)
C5: (57.760,110.032,100.932)
O3': (53.166,112.216,97.760)
Image (generated by PyMOL):