Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0615:02375
Extra
PDB:
ATOM 1 O3' U A 614 45.710 101.867 92.666 1.00 24.70 O
ATOM 2 P G A 615 45.073 103.249 92.169 1.00 25.84 P
ATOM 3 OP1 G A 615 43.736 102.935 91.641 1.00 26.67 O
ATOM 4 OP2 G A 615 46.058 103.923 91.298 1.00 27.40 O
ATOM 5 O5' G A 615 44.874 104.092 93.502 1.00 24.38 O
ATOM 6 C5' G A 615 43.885 103.710 94.464 1.00 24.60 C
ATOM 7 C4' G A 615 44.157 104.385 95.786 1.00 27.93 C
ATOM 8 O4' G A 615 45.435 103.939 96.312 1.00 27.91 O
ATOM 9 C3' G A 615 44.256 105.904 95.766 1.00 26.61 C
ATOM 10 O3' G A 615 42.963 106.504 95.859 1.00 25.66 O
ATOM 11 C2' G A 615 45.066 106.174 97.025 1.00 27.58 C
ATOM 12 O2' G A 615 44.252 106.101 98.175 1.00 27.06 O
ATOM 13 C1' G A 615 46.052 104.998 97.022 1.00 28.80 C
ATOM 14 N9 G A 615 47.327 105.297 96.371 1.00 32.62 N
ATOM 15 C8 G A 615 47.573 105.331 95.018 1.00 32.50 C
ATOM 16 N7 G A 615 48.806 105.642 94.728 1.00 32.45 N
ATOM 17 C5 G A 615 49.417 105.824 95.961 1.00 32.89 C
ATOM 18 C6 G A 615 50.750 106.177 96.277 1.00 32.74 C
ATOM 19 O6 G A 615 51.683 106.407 95.506 1.00 33.68 O
ATOM 20 N1 G A 615 50.951 106.257 97.650 1.00 31.77 N
ATOM 21 C2 G A 615 49.987 106.032 98.600 1.00 33.58 C
ATOM 22 N2 G A 615 50.365 106.180 99.876 1.00 33.61 N
ATOM 23 N3 G A 615 48.737 105.694 98.319 1.00 34.93 N
ATOM 24 C4 G A 615 48.523 105.611 96.987 1.00 33.50 C
TER
ATOM 1 O3' C B2374 54.131 106.178 98.839 1.00 34.45 O
ATOM 2 P C B2375 54.629 107.413 97.934 1.00 35.87 P
ATOM 3 OP1 C B2375 53.751 107.486 96.742 1.00 36.09 O
ATOM 4 OP2 C B2375 56.100 107.306 97.760 1.00 35.90 O
ATOM 5 O5' C B2375 54.343 108.700 98.817 1.00 33.97 O
ATOM 6 C5' C B2375 53.014 109.211 98.980 1.00 33.88 C
ATOM 7 C4' C B2375 53.068 110.608 99.550 1.00 35.20 C
ATOM 8 O4' C B2375 53.769 110.595 100.825 1.00 36.72 O
ATOM 9 C3' C B2375 53.853 111.614 98.732 1.00 35.20 C
ATOM 10 O3' C B2375 53.066 112.102 97.659 1.00 36.42 O
ATOM 11 C2' C B2375 54.177 112.674 99.774 1.00 35.52 C
ATOM 12 O2' C B2375 53.051 113.451 100.126 1.00 36.62 O
ATOM 13 C1' C B2375 54.499 111.803 100.985 1.00 35.57 C
ATOM 14 N1 C B2375 55.938 111.489 101.145 1.00 36.92 N
ATOM 15 C2 C B2375 56.804 112.490 101.635 1.00 39.64 C
ATOM 16 O2 C B2375 56.348 113.623 101.894 1.00 40.70 O
ATOM 17 N3 C B2375 58.116 112.198 101.809 1.00 40.08 N
ATOM 18 C4 C B2375 58.575 110.980 101.511 1.00 39.40 C
ATOM 19 N4 C B2375 59.877 110.740 101.712 1.00 41.07 N
ATOM 20 C5 C B2375 57.725 109.956 100.998 1.00 36.88 C
ATOM 21 C6 C B2375 56.430 110.250 100.834 1.00 36.72 C
ATOM 22 P U B2376 53.656 112.083 96.168 1.00 36.33 P
ATOM 23 OP1 U B2376 52.498 112.280 95.259 1.00 37.83 O
ATOM 24 OP2 U B2376 54.513 110.885 96.003 1.00 36.70 O
ATOM 25 O5' U B2376 54.563 113.392 96.113 1.00 36.53 O
TER
ATOM 2 P G A 615 45.073 103.249 92.169 1.00 25.84 P
ATOM 3 OP1 G A 615 43.736 102.935 91.641 1.00 26.67 O
ATOM 4 OP2 G A 615 46.058 103.923 91.298 1.00 27.40 O
ATOM 5 O5' G A 615 44.874 104.092 93.502 1.00 24.38 O
ATOM 6 C5' G A 615 43.885 103.710 94.464 1.00 24.60 C
ATOM 7 C4' G A 615 44.157 104.385 95.786 1.00 27.93 C
ATOM 8 O4' G A 615 45.435 103.939 96.312 1.00 27.91 O
ATOM 9 C3' G A 615 44.256 105.904 95.766 1.00 26.61 C
ATOM 10 O3' G A 615 42.963 106.504 95.859 1.00 25.66 O
ATOM 11 C2' G A 615 45.066 106.174 97.025 1.00 27.58 C
ATOM 12 O2' G A 615 44.252 106.101 98.175 1.00 27.06 O
ATOM 13 C1' G A 615 46.052 104.998 97.022 1.00 28.80 C
ATOM 14 N9 G A 615 47.327 105.297 96.371 1.00 32.62 N
ATOM 15 C8 G A 615 47.573 105.331 95.018 1.00 32.50 C
ATOM 16 N7 G A 615 48.806 105.642 94.728 1.00 32.45 N
ATOM 17 C5 G A 615 49.417 105.824 95.961 1.00 32.89 C
ATOM 18 C6 G A 615 50.750 106.177 96.277 1.00 32.74 C
ATOM 19 O6 G A 615 51.683 106.407 95.506 1.00 33.68 O
ATOM 20 N1 G A 615 50.951 106.257 97.650 1.00 31.77 N
ATOM 21 C2 G A 615 49.987 106.032 98.600 1.00 33.58 C
ATOM 22 N2 G A 615 50.365 106.180 99.876 1.00 33.61 N
ATOM 23 N3 G A 615 48.737 105.694 98.319 1.00 34.93 N
ATOM 24 C4 G A 615 48.523 105.611 96.987 1.00 33.50 C
TER
ATOM 1 O3' C B2374 54.131 106.178 98.839 1.00 34.45 O
ATOM 2 P C B2375 54.629 107.413 97.934 1.00 35.87 P
ATOM 3 OP1 C B2375 53.751 107.486 96.742 1.00 36.09 O
ATOM 4 OP2 C B2375 56.100 107.306 97.760 1.00 35.90 O
ATOM 5 O5' C B2375 54.343 108.700 98.817 1.00 33.97 O
ATOM 6 C5' C B2375 53.014 109.211 98.980 1.00 33.88 C
ATOM 7 C4' C B2375 53.068 110.608 99.550 1.00 35.20 C
ATOM 8 O4' C B2375 53.769 110.595 100.825 1.00 36.72 O
ATOM 9 C3' C B2375 53.853 111.614 98.732 1.00 35.20 C
ATOM 10 O3' C B2375 53.066 112.102 97.659 1.00 36.42 O
ATOM 11 C2' C B2375 54.177 112.674 99.774 1.00 35.52 C
ATOM 12 O2' C B2375 53.051 113.451 100.126 1.00 36.62 O
ATOM 13 C1' C B2375 54.499 111.803 100.985 1.00 35.57 C
ATOM 14 N1 C B2375 55.938 111.489 101.145 1.00 36.92 N
ATOM 15 C2 C B2375 56.804 112.490 101.635 1.00 39.64 C
ATOM 16 O2 C B2375 56.348 113.623 101.894 1.00 40.70 O
ATOM 17 N3 C B2375 58.116 112.198 101.809 1.00 40.08 N
ATOM 18 C4 C B2375 58.575 110.980 101.511 1.00 39.40 C
ATOM 19 N4 C B2375 59.877 110.740 101.712 1.00 41.07 N
ATOM 20 C5 C B2375 57.725 109.956 100.998 1.00 36.88 C
ATOM 21 C6 C B2375 56.430 110.250 100.834 1.00 36.72 C
ATOM 22 P U B2376 53.656 112.083 96.168 1.00 36.33 P
ATOM 23 OP1 U B2376 52.498 112.280 95.259 1.00 37.83 O
ATOM 24 OP2 U B2376 54.513 110.885 96.003 1.00 36.70 O
ATOM 25 O5' U B2376 54.563 113.392 96.113 1.00 36.53 O
TER
Atoms:
OP1: (43.736,102.935,91.641)
OP2: (46.058,103.923,91.298)
C3': (44.256,105.904,95.766)
C1': (46.052,104.998,97.022)
C5': (43.885,103.710,94.464)
O6: (51.683,106.407,95.506)
O4': (45.435,103.939,96.312)
C8: (47.573,105.331,95.018)
C2: (49.987,106.032,98.600)
C6: (50.750,106.177,96.277)
C5: (49.417,105.824,95.961)
C4: (48.523,105.611,96.987)
P: (45.073,103.249,92.169)
C4': (44.157,104.385,95.786)
C2': (45.066,106.174,97.025)
O2': (44.252,106.101,98.175)
N1: (50.951,106.257,97.650)
N2: (50.365,106.180,99.876)
N3: (48.737,105.694,98.319)
N7: (48.806,105.642,94.728)
N9: (47.327,105.297,96.371)
O5': (44.874,104.092,93.502)
O3': (42.963,106.504,95.859)
OP2: (46.058,103.923,91.298)
C3': (44.256,105.904,95.766)
C1': (46.052,104.998,97.022)
C5': (43.885,103.710,94.464)
O6: (51.683,106.407,95.506)
O4': (45.435,103.939,96.312)
C8: (47.573,105.331,95.018)
C2: (49.987,106.032,98.600)
C6: (50.750,106.177,96.277)
C5: (49.417,105.824,95.961)
C4: (48.523,105.611,96.987)
P: (45.073,103.249,92.169)
C4': (44.157,104.385,95.786)
C2': (45.066,106.174,97.025)
O2': (44.252,106.101,98.175)
N1: (50.951,106.257,97.650)
N2: (50.365,106.180,99.876)
N3: (48.737,105.694,98.319)
N7: (48.806,105.642,94.728)
N9: (47.327,105.297,96.371)
O5': (44.874,104.092,93.502)
O3': (42.963,106.504,95.859)
C2: (56.804,112.490,101.635)
OP1: (53.751,107.486,96.742)
OP2: (56.100,107.306,97.760)
C4: (58.575,110.980,101.511)
O5': (54.343,108.700,98.817)
C3': (53.853,111.614,98.732)
C1': (54.499,111.803,100.985)
O4': (53.769,110.595,100.825)
C5': (53.014,109.211,98.980)
P: (54.629,107.413,97.934)
O2: (56.348,113.623,101.894)
C4': (53.068,110.608,99.550)
C2': (54.177,112.674,99.774)
O2': (53.051,113.451,100.126)
N1: (55.938,111.489,101.145)
N3: (58.116,112.198,101.809)
N4: (59.877,110.740,101.712)
C6: (56.430,110.250,100.834)
C5: (57.725,109.956,100.998)
O3': (53.066,112.102,97.659)
OP1: (53.751,107.486,96.742)
OP2: (56.100,107.306,97.760)
C4: (58.575,110.980,101.511)
O5': (54.343,108.700,98.817)
C3': (53.853,111.614,98.732)
C1': (54.499,111.803,100.985)
O4': (53.769,110.595,100.825)
C5': (53.014,109.211,98.980)
P: (54.629,107.413,97.934)
O2: (56.348,113.623,101.894)
C4': (53.068,110.608,99.550)
C2': (54.177,112.674,99.774)
O2': (53.051,113.451,100.126)
N1: (55.938,111.489,101.145)
N3: (58.116,112.198,101.809)
N4: (59.877,110.740,101.712)
C6: (56.430,110.250,100.834)
C5: (57.725,109.956,100.998)
O3': (53.066,112.102,97.659)
Image (generated by PyMOL):