ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2CKY:A29:A44

Extra

PDB:
ATOM 1 O3' A A 28 12.900 6.198 -45.104 1.00 33.56 O
ATOM 2 P G A 29 13.028 7.586 -44.336 1.00 31.99 P
ATOM 3 OP1 G A 29 14.462 7.913 -44.234 1.00 33.02 O
ATOM 4 OP2 G A 29 12.224 7.593 -43.084 1.00 31.24 O
ATOM 5 O5' G A 29 12.328 8.474 -45.441 1.00 29.34 O
ATOM 6 C5' G A 29 13.164 9.022 -46.400 1.00 31.14 C
ATOM 7 C4' G A 29 12.349 9.683 -47.473 1.00 31.16 C
ATOM 8 O4' G A 29 11.249 8.827 -47.821 1.00 30.97 O
ATOM 9 C3' G A 29 11.720 10.986 -47.058 1.00 31.06 C
ATOM 10 O3' G A 29 12.624 12.045 -47.267 1.00 32.88 O
ATOM 11 C2' G A 29 10.558 11.035 -48.029 1.00 30.98 C
ATOM 12 O2' G A 29 10.931 11.368 -49.353 1.00 31.65 O
ATOM 13 C1' G A 29 10.083 9.599 -48.003 1.00 30.60 C
ATOM 14 N9 G A 29 9.116 9.272 -46.958 1.00 29.33 N
ATOM 15 C8 G A 29 9.352 8.657 -45.764 1.00 29.33 C
ATOM 16 N7 G A 29 8.279 8.503 -45.057 1.00 28.40 N
ATOM 17 C5 G A 29 7.266 9.039 -45.823 1.00 27.70 C
ATOM 18 C6 G A 29 5.866 9.152 -45.566 1.00 28.62 C
ATOM 19 O6 G A 29 5.293 8.746 -44.540 1.00 27.99 O
ATOM 20 N1 G A 29 5.180 9.811 -46.666 1.00 28.34 N
ATOM 21 C2 G A 29 5.860 10.215 -47.766 1.00 27.90 C
ATOM 22 N2 G A 29 5.060 10.788 -48.661 1.00 28.27 N
ATOM 23 N3 G A 29 7.140 10.114 -48.009 1.00 27.69 N
ATOM 24 C4 G A 29 7.776 9.513 -46.995 1.00 27.52 C
ATOM 25 P A A 30 13.299 12.849 -46.059 1.00 35.01 P
ATOM 26 OP1 A A 30 14.521 13.436 -46.666 1.00 36.05 O
ATOM 27 OP2 A A 30 13.361 12.052 -44.821 1.00 32.74 O
ATOM 28 O5' A A 30 12.253 14.012 -45.777 1.00 34.17 O
TER

ATOM 1 O3' A B 43 2.116 7.693 -49.086 1.00 33.26 O
ATOM 2 P C B 44 1.557 8.636 -47.919 1.00 34.89 P
ATOM 3 OP1 C B 44 2.694 8.980 -47.032 1.00 32.21 O
ATOM 4 OP2 C B 44 0.264 8.103 -47.408 1.00 33.71 O
ATOM 5 O5' C B 44 1.265 9.952 -48.743 1.00 36.49 O
ATOM 6 C5' C B 44 0.061 10.641 -48.611 1.00 37.98 C
ATOM 7 C4' C B 44 -0.380 11.107 -49.977 1.00 38.84 C
ATOM 8 O4' C B 44 -0.686 9.979 -50.824 1.00 39.95 O
ATOM 9 C3' C B 44 -1.688 11.854 -49.907 1.00 39.62 C
ATOM 10 O3' C B 44 -1.494 13.176 -49.352 1.00 38.60 O
ATOM 11 C2' C B 44 -2.225 11.706 -51.336 1.00 40.37 C
ATOM 12 O2' C B 44 -1.688 12.558 -52.338 1.00 40.69 O
ATOM 13 C1' C B 44 -1.857 10.242 -51.589 1.00 40.93 C
ATOM 14 N1 C B 44 -2.997 9.306 -51.247 1.00 41.11 N
ATOM 15 C2 C B 44 -4.112 9.281 -52.080 1.00 43.28 C
ATOM 16 O2 C B 44 -4.131 10.010 -53.091 1.00 45.11 O
ATOM 17 N3 C B 44 -5.143 8.458 -51.781 1.00 43.04 N
ATOM 18 C4 C B 44 -5.098 7.685 -50.716 1.00 42.03 C
ATOM 19 N4 C B 44 -6.139 6.906 -50.468 1.00 43.31 N
ATOM 20 C5 C B 44 -3.986 7.683 -49.853 1.00 41.40 C
ATOM 21 C6 C B 44 -2.974 8.504 -50.150 1.00 41.16 C
ATOM 22 P C B 45 -2.598 13.644 -48.285 1.00 38.17 P
ATOM 23 OP1 C B 45 -1.904 14.000 -47.045 1.00 35.04 O
ATOM 24 OP2 C B 45 -3.725 12.696 -48.232 1.00 39.58 O
ATOM 25 O5' C B 45 -3.281 14.871 -49.025 1.00 40.29 O
TER

Atoms:
OP1: (14.462,7.913,-44.234)
OP2: (12.224,7.593,-43.084)
C3': (11.720,10.986,-47.058)
C1': (10.083,9.599,-48.003)
C5': (13.164,9.022,-46.400)
O6: (5.293,8.746,-44.540)
O4': (11.249,8.827,-47.821)
C8: (9.352,8.657,-45.764)
C2: (5.860,10.215,-47.766)
C6: (5.866,9.152,-45.566)
C5: (7.266,9.039,-45.823)
C4: (7.776,9.513,-46.995)
P: (13.028,7.586,-44.336)
C4': (12.349,9.683,-47.473)
C2': (10.558,11.035,-48.029)
O2': (10.931,11.368,-49.353)
N1: (5.180,9.811,-46.666)
N2: (5.060,10.788,-48.661)
N3: (7.140,10.114,-48.009)
N7: (8.279,8.503,-45.057)
N9: (9.116,9.272,-46.958)
O5': (12.328,8.474,-45.441)
O3': (12.624,12.045,-47.267)
C2: (-4.112,9.281,-52.080)
OP1: (2.694,8.980,-47.032)
OP2: (0.264,8.103,-47.408)
C4: (-5.098,7.685,-50.716)
O5': (1.265,9.952,-48.743)
C3': (-1.688,11.854,-49.907)
C1': (-1.857,10.242,-51.589)
O4': (-0.686,9.979,-50.824)
C5': (0.061,10.641,-48.611)
P: (1.557,8.636,-47.919)
O2: (-4.131,10.010,-53.091)
C4': (-0.380,11.107,-49.977)
C2': (-2.225,11.706,-51.336)
O2': (-1.688,12.558,-52.338)
N1: (-2.997,9.306,-51.247)
N3: (-5.143,8.458,-51.781)
N4: (-6.139,6.906,-50.468)
C6: (-2.974,8.504,-50.150)
C5: (-3.986,7.683,-49.853)
O3': (-1.494,13.176,-49.352)
Image (generated by PyMOL):
PyMOL image
show in jmol