ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CXC:0235:0252

Extra

PDB:
ATOM 1 O3' G A 234 94.427 118.321 -7.572 1.00 81.09 O
ATOM 2 P A A 235 95.134 119.318 -8.611 1.00 80.56 P
ATOM 3 OP1 A A 235 94.915 118.774 -9.988 1.00 81.04 O
ATOM 4 OP2 A A 235 96.522 119.508 -8.103 1.00 79.21 O
ATOM 5 O5' A A 235 94.290 120.661 -8.456 1.00 79.27 O
ATOM 6 C5' A A 235 92.859 120.686 -8.714 1.00 77.03 C
ATOM 7 C4' A A 235 92.218 121.803 -7.928 1.00 76.96 C
ATOM 8 O4' A A 235 92.154 121.436 -6.523 1.00 77.23 O
ATOM 9 C3' A A 235 92.981 123.122 -7.994 1.00 77.51 C
ATOM 10 O3' A A 235 92.071 124.209 -7.946 1.00 78.86 O
ATOM 11 C2' A A 235 93.784 123.113 -6.698 1.00 76.63 C
ATOM 12 O2' A A 235 94.176 124.396 -6.248 1.00 75.65 O
ATOM 13 C1' A A 235 92.804 122.423 -5.748 1.00 76.54 C
ATOM 14 N9 A A 235 93.420 121.784 -4.586 1.00 76.33 N
ATOM 15 C8 A A 235 94.224 120.667 -4.531 1.00 76.65 C
ATOM 16 N7 A A 235 94.642 120.379 -3.323 1.00 76.47 N
ATOM 17 C5 A A 235 94.068 121.364 -2.529 1.00 76.18 C
ATOM 18 C6 A A 235 94.137 121.626 -1.157 1.00 76.12 C
ATOM 19 N6 A A 235 94.847 120.898 -0.296 1.00 76.63 N
ATOM 20 N1 A A 235 93.445 122.682 -0.687 1.00 76.44 N
ATOM 21 C2 A A 235 92.738 123.422 -1.549 1.00 76.31 C
ATOM 22 N3 A A 235 92.600 123.283 -2.859 1.00 75.48 N
ATOM 23 C4 A A 235 93.303 122.225 -3.292 1.00 75.81 C
ATOM 24 P A A 236 91.657 124.960 -9.296 1.00 80.40 P
ATOM 25 OP1 A A 236 92.679 124.616 -10.333 1.00 79.84 O
ATOM 26 OP2 A A 236 91.393 126.393 -8.958 1.00 79.90 O
ATOM 27 O5' A A 236 90.286 124.263 -9.732 1.00 79.70 O
TER

ATOM 1 O3' U B 251 97.186 119.180 7.230 1.00 68.46 O
ATOM 2 P G B 252 95.933 118.381 6.620 1.00 67.24 P
ATOM 3 OP1 G B 252 94.753 118.731 7.450 1.00 68.66 O
ATOM 4 OP2 G B 252 96.283 116.953 6.404 1.00 66.93 O
ATOM 5 O5' G B 252 95.724 119.049 5.200 1.00 66.43 O
ATOM 6 C5' G B 252 95.150 120.349 5.084 1.00 67.65 C
ATOM 7 C4' G B 252 94.119 120.338 3.995 1.00 67.09 C
ATOM 8 O4' G B 252 94.786 120.014 2.747 1.00 68.07 O
ATOM 9 C3' G B 252 93.018 119.307 4.190 1.00 67.85 C
ATOM 10 O3' G B 252 91.785 119.852 3.757 1.00 69.56 O
ATOM 11 C2' G B 252 93.456 118.118 3.333 1.00 66.69 C
ATOM 12 O2' G B 252 92.363 117.433 2.736 1.00 66.07 O
ATOM 13 C1' G B 252 94.341 118.765 2.262 1.00 66.49 C
ATOM 14 N9 G B 252 95.519 117.945 1.982 1.00 65.05 N
ATOM 15 C8 G B 252 96.317 117.314 2.904 1.00 63.48 C
ATOM 16 N7 G B 252 97.251 116.585 2.362 1.00 65.24 N
ATOM 17 C5 G B 252 97.074 116.756 0.996 1.00 64.90 C
ATOM 18 C6 G B 252 97.780 116.187 -0.106 1.00 65.24 C
ATOM 19 O6 G B 252 98.722 115.375 -0.089 1.00 65.47 O
ATOM 20 N1 G B 252 97.281 116.646 -1.321 1.00 64.91 N
ATOM 21 C2 G B 252 96.242 117.533 -1.466 1.00 64.32 C
ATOM 22 N2 G B 252 95.930 117.879 -2.722 1.00 63.36 N
ATOM 23 N3 G B 252 95.563 118.050 -0.451 1.00 64.75 N
ATOM 24 C4 G B 252 96.027 117.617 0.744 1.00 64.52 C
ATOM 25 P U B 253 90.505 119.755 4.722 1.00 70.29 P
ATOM 26 OP1 U B 253 90.910 120.370 6.023 1.00 69.98 O
ATOM 27 OP2 U B 253 90.018 118.346 4.687 1.00 69.86 O
ATOM 28 O5' U B 253 89.425 120.696 4.024 1.00 69.63 O
TER

Atoms:
OP1: (94.915,118.774,-9.988)
OP2: (96.522,119.508,-8.103)
C3': (92.981,123.122,-7.994)
C1': (92.804,122.423,-5.748)
C5': (92.859,120.686,-8.714)
O4': (92.154,121.436,-6.523)
C8: (94.224,120.667,-4.531)
O2': (94.176,124.396,-6.248)
C6: (94.137,121.626,-1.157)
C5: (94.068,121.364,-2.529)
C4: (93.303,122.225,-3.292)
P: (95.134,119.318,-8.611)
C4': (92.218,121.803,-7.928)
C2': (93.784,123.113,-6.698)
C2: (92.738,123.422,-1.549)
N1: (93.445,122.682,-0.687)
N3: (92.600,123.283,-2.859)
N6: (94.847,120.898,-0.296)
N7: (94.642,120.379,-3.323)
N9: (93.420,121.784,-4.586)
O5': (94.290,120.661,-8.456)
O3': (92.071,124.209,-7.946)
OP1: (94.753,118.731,7.450)
OP2: (96.283,116.953,6.404)
C3': (93.018,119.307,4.190)
C1': (94.341,118.765,2.262)
C5': (95.150,120.349,5.084)
O6: (98.722,115.375,-0.089)
O4': (94.786,120.014,2.747)
C8: (96.317,117.314,2.904)
C2: (96.242,117.533,-1.466)
C6: (97.780,116.187,-0.106)
C5: (97.074,116.756,0.996)
C4: (96.027,117.617,0.744)
P: (95.933,118.381,6.620)
C4': (94.119,120.338,3.995)
C2': (93.456,118.118,3.333)
O2': (92.363,117.433,2.736)
N1: (97.281,116.646,-1.321)
N2: (95.930,117.879,-2.722)
N3: (95.563,118.050,-0.451)
N7: (97.251,116.585,2.362)
N9: (95.519,117.945,1.982)
O5': (95.724,119.049,5.200)
O3': (91.785,119.852,3.757)
Image (generated by PyMOL):
PyMOL image
show in jmol