Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A29:A44
Extra
PDB:
ATOM 1 O3' A A 28 -9.850 11.887 -31.266 1.00 38.11 O
ATOM 2 P G A 29 -9.333 13.395 -31.416 1.00 37.26 P
ATOM 3 OP1 G A 29 -9.667 13.855 -32.782 1.00 37.85 O
ATOM 4 OP2 G A 29 -7.933 13.451 -30.942 1.00 33.66 O
ATOM 5 O5' G A 29 -10.265 14.181 -30.386 1.00 35.16 O
ATOM 6 C5' G A 29 -11.672 14.215 -30.566 1.00 37.12 C
ATOM 7 C4' G A 29 -12.332 14.804 -29.335 1.00 34.87 C
ATOM 8 O4' G A 29 -12.124 13.908 -28.216 1.00 37.40 O
ATOM 9 C3' G A 29 -11.767 16.148 -28.898 1.00 38.61 C
ATOM 10 O3' G A 29 -12.541 17.191 -29.471 1.00 34.00 O
ATOM 11 C2' G A 29 -11.941 16.122 -27.384 1.00 32.82 C
ATOM 12 O2' G A 29 -13.234 16.541 -27.006 1.00 34.12 O
ATOM 13 C1' G A 29 -11.792 14.643 -27.051 1.00 36.02 C
ATOM 14 N9 G A 29 -10.468 14.210 -26.609 1.00 33.28 N
ATOM 15 C8 G A 29 -9.427 13.786 -27.398 1.00 36.17 C
ATOM 16 N7 G A 29 -8.368 13.439 -26.719 1.00 34.26 N
ATOM 17 C5 G A 29 -8.731 13.639 -25.395 1.00 30.90 C
ATOM 18 C6 G A 29 -7.991 13.431 -24.207 1.00 29.22 C
ATOM 19 O6 G A 29 -6.828 13.018 -24.088 1.00 28.08 O
ATOM 20 N1 G A 29 -8.738 13.758 -23.077 1.00 29.58 N
ATOM 21 C2 G A 29 -10.031 14.226 -23.095 1.00 30.57 C
ATOM 22 N2 G A 29 -10.589 14.488 -21.905 1.00 26.90 N
ATOM 23 N3 G A 29 -10.734 14.425 -24.203 1.00 32.48 N
ATOM 24 C4 G A 29 -10.022 14.111 -25.311 1.00 31.64 C
ATOM 25 P A A 30 -11.823 18.514 -30.001 1.00 35.85 P
ATOM 26 OP1 A A 30 -12.878 19.445 -30.455 1.00 40.07 O
ATOM 27 OP2 A A 30 -10.723 18.125 -30.912 1.00 35.19 O
ATOM 28 O5' A A 30 -11.176 19.119 -28.671 1.00 31.91 O
TER
ATOM 1 O3' A B 43 -9.604 10.806 -19.693 1.00 25.07 O
ATOM 2 P C B 44 -8.467 11.919 -19.500 1.00 29.20 P
ATOM 3 OP1 C B 44 -8.465 12.825 -20.664 1.00 25.26 O
ATOM 4 OP2 C B 44 -7.228 11.245 -19.052 1.00 23.21 O
ATOM 5 O5' C B 44 -9.061 12.802 -18.326 1.00 29.95 O
ATOM 6 C5' C B 44 -8.709 12.504 -17.029 1.00 29.15 C
ATOM 7 C4' C B 44 -9.790 13.062 -16.143 1.00 30.03 C
ATOM 8 O4' C B 44 -10.640 11.968 -15.721 1.00 25.66 O
ATOM 9 C3' C B 44 -9.203 13.674 -14.890 1.00 24.56 C
ATOM 10 O3' C B 44 -9.075 15.069 -15.109 1.00 28.00 O
ATOM 11 C2' C B 44 -10.234 13.300 -13.834 1.00 23.88 C
ATOM 12 O2' C B 44 -11.351 14.163 -13.835 1.00 26.99 O
ATOM 13 C1' C B 44 -10.643 11.909 -14.315 1.00 23.67 C
ATOM 14 N1 C B 44 -9.699 10.845 -13.885 1.00 25.45 N
ATOM 15 C2 C B 44 -9.812 10.370 -12.583 1.00 22.57 C
ATOM 16 O2 C B 44 -10.689 10.855 -11.861 1.00 24.83 O
ATOM 17 N3 C B 44 -8.962 9.409 -12.160 1.00 20.72 N
ATOM 18 C4 C B 44 -8.034 8.921 -12.986 1.00 24.30 C
ATOM 19 N4 C B 44 -7.222 7.967 -12.518 1.00 21.31 N
ATOM 20 C5 C B 44 -7.900 9.392 -14.324 1.00 24.32 C
ATOM 21 C6 C B 44 -8.746 10.347 -14.726 1.00 25.51 C
ATOM 22 P C B 45 -7.786 15.832 -14.551 1.00 25.08 P
ATOM 23 OP1 C B 45 -7.754 17.180 -15.159 1.00 27.64 O
ATOM 24 OP2 C B 45 -6.608 14.946 -14.677 1.00 24.76 O
ATOM 25 O5' C B 45 -8.131 15.969 -12.999 1.00 25.12 O
TER
ATOM 2 P G A 29 -9.333 13.395 -31.416 1.00 37.26 P
ATOM 3 OP1 G A 29 -9.667 13.855 -32.782 1.00 37.85 O
ATOM 4 OP2 G A 29 -7.933 13.451 -30.942 1.00 33.66 O
ATOM 5 O5' G A 29 -10.265 14.181 -30.386 1.00 35.16 O
ATOM 6 C5' G A 29 -11.672 14.215 -30.566 1.00 37.12 C
ATOM 7 C4' G A 29 -12.332 14.804 -29.335 1.00 34.87 C
ATOM 8 O4' G A 29 -12.124 13.908 -28.216 1.00 37.40 O
ATOM 9 C3' G A 29 -11.767 16.148 -28.898 1.00 38.61 C
ATOM 10 O3' G A 29 -12.541 17.191 -29.471 1.00 34.00 O
ATOM 11 C2' G A 29 -11.941 16.122 -27.384 1.00 32.82 C
ATOM 12 O2' G A 29 -13.234 16.541 -27.006 1.00 34.12 O
ATOM 13 C1' G A 29 -11.792 14.643 -27.051 1.00 36.02 C
ATOM 14 N9 G A 29 -10.468 14.210 -26.609 1.00 33.28 N
ATOM 15 C8 G A 29 -9.427 13.786 -27.398 1.00 36.17 C
ATOM 16 N7 G A 29 -8.368 13.439 -26.719 1.00 34.26 N
ATOM 17 C5 G A 29 -8.731 13.639 -25.395 1.00 30.90 C
ATOM 18 C6 G A 29 -7.991 13.431 -24.207 1.00 29.22 C
ATOM 19 O6 G A 29 -6.828 13.018 -24.088 1.00 28.08 O
ATOM 20 N1 G A 29 -8.738 13.758 -23.077 1.00 29.58 N
ATOM 21 C2 G A 29 -10.031 14.226 -23.095 1.00 30.57 C
ATOM 22 N2 G A 29 -10.589 14.488 -21.905 1.00 26.90 N
ATOM 23 N3 G A 29 -10.734 14.425 -24.203 1.00 32.48 N
ATOM 24 C4 G A 29 -10.022 14.111 -25.311 1.00 31.64 C
ATOM 25 P A A 30 -11.823 18.514 -30.001 1.00 35.85 P
ATOM 26 OP1 A A 30 -12.878 19.445 -30.455 1.00 40.07 O
ATOM 27 OP2 A A 30 -10.723 18.125 -30.912 1.00 35.19 O
ATOM 28 O5' A A 30 -11.176 19.119 -28.671 1.00 31.91 O
TER
ATOM 1 O3' A B 43 -9.604 10.806 -19.693 1.00 25.07 O
ATOM 2 P C B 44 -8.467 11.919 -19.500 1.00 29.20 P
ATOM 3 OP1 C B 44 -8.465 12.825 -20.664 1.00 25.26 O
ATOM 4 OP2 C B 44 -7.228 11.245 -19.052 1.00 23.21 O
ATOM 5 O5' C B 44 -9.061 12.802 -18.326 1.00 29.95 O
ATOM 6 C5' C B 44 -8.709 12.504 -17.029 1.00 29.15 C
ATOM 7 C4' C B 44 -9.790 13.062 -16.143 1.00 30.03 C
ATOM 8 O4' C B 44 -10.640 11.968 -15.721 1.00 25.66 O
ATOM 9 C3' C B 44 -9.203 13.674 -14.890 1.00 24.56 C
ATOM 10 O3' C B 44 -9.075 15.069 -15.109 1.00 28.00 O
ATOM 11 C2' C B 44 -10.234 13.300 -13.834 1.00 23.88 C
ATOM 12 O2' C B 44 -11.351 14.163 -13.835 1.00 26.99 O
ATOM 13 C1' C B 44 -10.643 11.909 -14.315 1.00 23.67 C
ATOM 14 N1 C B 44 -9.699 10.845 -13.885 1.00 25.45 N
ATOM 15 C2 C B 44 -9.812 10.370 -12.583 1.00 22.57 C
ATOM 16 O2 C B 44 -10.689 10.855 -11.861 1.00 24.83 O
ATOM 17 N3 C B 44 -8.962 9.409 -12.160 1.00 20.72 N
ATOM 18 C4 C B 44 -8.034 8.921 -12.986 1.00 24.30 C
ATOM 19 N4 C B 44 -7.222 7.967 -12.518 1.00 21.31 N
ATOM 20 C5 C B 44 -7.900 9.392 -14.324 1.00 24.32 C
ATOM 21 C6 C B 44 -8.746 10.347 -14.726 1.00 25.51 C
ATOM 22 P C B 45 -7.786 15.832 -14.551 1.00 25.08 P
ATOM 23 OP1 C B 45 -7.754 17.180 -15.159 1.00 27.64 O
ATOM 24 OP2 C B 45 -6.608 14.946 -14.677 1.00 24.76 O
ATOM 25 O5' C B 45 -8.131 15.969 -12.999 1.00 25.12 O
TER
Atoms:
OP1: (-9.667,13.855,-32.782)
OP2: (-7.933,13.451,-30.942)
C3': (-11.767,16.148,-28.898)
C1': (-11.792,14.643,-27.051)
C5': (-11.672,14.215,-30.566)
O6: (-6.828,13.018,-24.088)
O4': (-12.124,13.908,-28.216)
C8: (-9.427,13.786,-27.398)
C2: (-10.031,14.226,-23.095)
C6: (-7.991,13.431,-24.207)
C5: (-8.731,13.639,-25.395)
C4: (-10.022,14.111,-25.311)
P: (-9.333,13.395,-31.416)
C4': (-12.332,14.804,-29.335)
C2': (-11.941,16.122,-27.384)
O2': (-13.234,16.541,-27.006)
N1: (-8.738,13.758,-23.077)
N2: (-10.589,14.488,-21.905)
N3: (-10.734,14.425,-24.203)
N7: (-8.368,13.439,-26.719)
N9: (-10.468,14.210,-26.609)
O5': (-10.265,14.181,-30.386)
O3': (-12.541,17.191,-29.471)
OP2: (-7.933,13.451,-30.942)
C3': (-11.767,16.148,-28.898)
C1': (-11.792,14.643,-27.051)
C5': (-11.672,14.215,-30.566)
O6: (-6.828,13.018,-24.088)
O4': (-12.124,13.908,-28.216)
C8: (-9.427,13.786,-27.398)
C2: (-10.031,14.226,-23.095)
C6: (-7.991,13.431,-24.207)
C5: (-8.731,13.639,-25.395)
C4: (-10.022,14.111,-25.311)
P: (-9.333,13.395,-31.416)
C4': (-12.332,14.804,-29.335)
C2': (-11.941,16.122,-27.384)
O2': (-13.234,16.541,-27.006)
N1: (-8.738,13.758,-23.077)
N2: (-10.589,14.488,-21.905)
N3: (-10.734,14.425,-24.203)
N7: (-8.368,13.439,-26.719)
N9: (-10.468,14.210,-26.609)
O5': (-10.265,14.181,-30.386)
O3': (-12.541,17.191,-29.471)
C2: (-9.812,10.370,-12.583)
OP1: (-8.465,12.825,-20.664)
OP2: (-7.228,11.245,-19.052)
C4: (-8.034,8.921,-12.986)
O5': (-9.061,12.802,-18.326)
C3': (-9.203,13.674,-14.890)
C1': (-10.643,11.909,-14.315)
O4': (-10.640,11.968,-15.721)
C5': (-8.709,12.504,-17.029)
P: (-8.467,11.919,-19.500)
O2: (-10.689,10.855,-11.861)
C4': (-9.790,13.062,-16.143)
C2': (-10.234,13.300,-13.834)
O2': (-11.351,14.163,-13.835)
N1: (-9.699,10.845,-13.885)
N3: (-8.962,9.409,-12.160)
N4: (-7.222,7.967,-12.518)
C6: (-8.746,10.347,-14.726)
C5: (-7.900,9.392,-14.324)
O3': (-9.075,15.069,-15.109)
OP1: (-8.465,12.825,-20.664)
OP2: (-7.228,11.245,-19.052)
C4: (-8.034,8.921,-12.986)
O5': (-9.061,12.802,-18.326)
C3': (-9.203,13.674,-14.890)
C1': (-10.643,11.909,-14.315)
O4': (-10.640,11.968,-15.721)
C5': (-8.709,12.504,-17.029)
P: (-8.467,11.919,-19.500)
O2: (-10.689,10.855,-11.861)
C4': (-9.790,13.062,-16.143)
C2': (-10.234,13.300,-13.834)
O2': (-11.351,14.163,-13.835)
N1: (-9.699,10.845,-13.885)
N3: (-8.962,9.409,-12.160)
N4: (-7.222,7.967,-12.518)
C6: (-8.746,10.347,-14.726)
C5: (-7.900,9.392,-14.324)
O3': (-9.075,15.069,-15.109)
Image (generated by PyMOL):