Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1254:A1580
Extra
PDB:
ATOM 1 O3' C A1253 30.679 -50.131 3.039 1.00 39.85 O
ATOM 2 P G A1254 30.378 -48.842 3.951 1.00 49.82 P
ATOM 3 OP1 G A1254 31.375 -47.768 3.666 1.00 47.65 O
ATOM 4 OP2 G A1254 30.199 -49.311 5.344 1.00 50.52 O
ATOM 5 O5' G A1254 28.957 -48.373 3.429 1.00 54.63 O
ATOM 6 C5' G A1254 28.704 -48.225 2.033 1.00 53.59 C
ATOM 7 C4' G A1254 27.226 -48.127 1.783 1.00 56.14 C
ATOM 8 O4' G A1254 26.608 -49.428 1.905 1.00 55.89 O
ATOM 9 C3' G A1254 26.490 -47.247 2.766 1.00 52.94 C
ATOM 10 O3' G A1254 26.600 -45.913 2.329 1.00 48.00 O
ATOM 11 C2' G A1254 25.069 -47.801 2.720 1.00 52.42 C
ATOM 12 O2' G A1254 24.305 -47.259 1.653 1.00 45.18 O
ATOM 13 C1' G A1254 25.328 -49.297 2.486 1.00 52.85 C
ATOM 14 N9 G A1254 25.346 -50.080 3.712 1.00 52.22 N
ATOM 15 C8 G A1254 26.362 -50.091 4.632 1.00 54.95 C
ATOM 16 N7 G A1254 26.111 -50.846 5.662 1.00 58.98 N
ATOM 17 C5 G A1254 24.855 -51.367 5.412 1.00 55.25 C
ATOM 18 C6 G A1254 24.063 -52.220 6.195 1.00 50.10 C
ATOM 19 O6 G A1254 24.318 -52.689 7.313 1.00 48.24 O
ATOM 20 N1 G A1254 22.862 -52.519 5.572 1.00 51.03 N
ATOM 21 C2 G A1254 22.477 -52.054 4.347 1.00 47.31 C
ATOM 22 N2 G A1254 21.290 -52.475 3.926 1.00 51.13 N
ATOM 23 N3 G A1254 23.203 -51.241 3.599 1.00 47.57 N
ATOM 24 C4 G A1254 24.375 -50.932 4.196 1.00 53.91 C
ATOM 25 P U A1255 27.107 -44.808 3.354 1.00 45.07 P
ATOM 26 OP1 U A1255 28.443 -45.213 3.796 1.00 43.79 O
ATOM 27 OP2 U A1255 26.018 -44.618 4.345 1.00 51.56 O
ATOM 28 O5' U A1255 27.217 -43.473 2.479 1.00 51.37 O
TER
ATOM 1 O3' U B1579 20.078 -52.222 9.647 1.00 49.00 O
ATOM 2 P C B1580 19.925 -53.446 8.591 1.00 45.52 P
ATOM 3 OP1 C B1580 19.741 -54.706 9.342 1.00 43.36 O
ATOM 4 OP2 C B1580 21.023 -53.354 7.579 1.00 50.23 O
ATOM 5 O5' C B1580 18.564 -53.144 7.815 1.00 47.62 O
ATOM 6 C5' C B1580 18.565 -52.195 6.757 1.00 52.66 C
ATOM 7 C4' C B1580 17.280 -51.417 6.722 1.00 53.32 C
ATOM 8 O4' C B1580 17.557 -49.994 6.702 1.00 51.79 O
ATOM 9 C3' C B1580 16.498 -51.688 5.461 1.00 49.40 C
ATOM 10 O3' C B1580 15.613 -52.760 5.665 1.00 51.63 O
ATOM 11 C2' C B1580 15.813 -50.366 5.189 1.00 49.84 C
ATOM 12 O2' C B1580 14.678 -50.130 5.992 1.00 45.68 O
ATOM 13 C1' C B1580 16.914 -49.397 5.593 1.00 51.59 C
ATOM 14 N1 C B1580 17.937 -49.231 4.542 1.00 52.01 N
ATOM 15 C2 C B1580 17.554 -49.167 3.192 1.00 58.30 C
ATOM 16 O2 C B1580 16.347 -49.266 2.896 1.00 62.51 O
ATOM 17 N3 C B1580 18.510 -49.000 2.245 1.00 57.98 N
ATOM 18 C4 C B1580 19.794 -48.902 2.602 1.00 52.40 C
ATOM 19 N4 C B1580 20.710 -48.714 1.637 1.00 49.26 N
ATOM 20 C5 C B1580 20.206 -48.981 3.959 1.00 48.84 C
ATOM 21 C6 C B1580 19.256 -49.139 4.884 1.00 49.16 C
ATOM 22 P A B1581 15.712 -54.035 4.711 1.00 55.56 P
ATOM 23 OP1 A B1581 14.415 -54.774 4.810 1.00 61.27 O
ATOM 24 OP2 A B1581 16.988 -54.728 5.065 1.00 56.30 O
ATOM 25 O5' A B1581 15.835 -53.365 3.262 1.00 52.86 O
TER
ATOM 2 P G A1254 30.378 -48.842 3.951 1.00 49.82 P
ATOM 3 OP1 G A1254 31.375 -47.768 3.666 1.00 47.65 O
ATOM 4 OP2 G A1254 30.199 -49.311 5.344 1.00 50.52 O
ATOM 5 O5' G A1254 28.957 -48.373 3.429 1.00 54.63 O
ATOM 6 C5' G A1254 28.704 -48.225 2.033 1.00 53.59 C
ATOM 7 C4' G A1254 27.226 -48.127 1.783 1.00 56.14 C
ATOM 8 O4' G A1254 26.608 -49.428 1.905 1.00 55.89 O
ATOM 9 C3' G A1254 26.490 -47.247 2.766 1.00 52.94 C
ATOM 10 O3' G A1254 26.600 -45.913 2.329 1.00 48.00 O
ATOM 11 C2' G A1254 25.069 -47.801 2.720 1.00 52.42 C
ATOM 12 O2' G A1254 24.305 -47.259 1.653 1.00 45.18 O
ATOM 13 C1' G A1254 25.328 -49.297 2.486 1.00 52.85 C
ATOM 14 N9 G A1254 25.346 -50.080 3.712 1.00 52.22 N
ATOM 15 C8 G A1254 26.362 -50.091 4.632 1.00 54.95 C
ATOM 16 N7 G A1254 26.111 -50.846 5.662 1.00 58.98 N
ATOM 17 C5 G A1254 24.855 -51.367 5.412 1.00 55.25 C
ATOM 18 C6 G A1254 24.063 -52.220 6.195 1.00 50.10 C
ATOM 19 O6 G A1254 24.318 -52.689 7.313 1.00 48.24 O
ATOM 20 N1 G A1254 22.862 -52.519 5.572 1.00 51.03 N
ATOM 21 C2 G A1254 22.477 -52.054 4.347 1.00 47.31 C
ATOM 22 N2 G A1254 21.290 -52.475 3.926 1.00 51.13 N
ATOM 23 N3 G A1254 23.203 -51.241 3.599 1.00 47.57 N
ATOM 24 C4 G A1254 24.375 -50.932 4.196 1.00 53.91 C
ATOM 25 P U A1255 27.107 -44.808 3.354 1.00 45.07 P
ATOM 26 OP1 U A1255 28.443 -45.213 3.796 1.00 43.79 O
ATOM 27 OP2 U A1255 26.018 -44.618 4.345 1.00 51.56 O
ATOM 28 O5' U A1255 27.217 -43.473 2.479 1.00 51.37 O
TER
ATOM 1 O3' U B1579 20.078 -52.222 9.647 1.00 49.00 O
ATOM 2 P C B1580 19.925 -53.446 8.591 1.00 45.52 P
ATOM 3 OP1 C B1580 19.741 -54.706 9.342 1.00 43.36 O
ATOM 4 OP2 C B1580 21.023 -53.354 7.579 1.00 50.23 O
ATOM 5 O5' C B1580 18.564 -53.144 7.815 1.00 47.62 O
ATOM 6 C5' C B1580 18.565 -52.195 6.757 1.00 52.66 C
ATOM 7 C4' C B1580 17.280 -51.417 6.722 1.00 53.32 C
ATOM 8 O4' C B1580 17.557 -49.994 6.702 1.00 51.79 O
ATOM 9 C3' C B1580 16.498 -51.688 5.461 1.00 49.40 C
ATOM 10 O3' C B1580 15.613 -52.760 5.665 1.00 51.63 O
ATOM 11 C2' C B1580 15.813 -50.366 5.189 1.00 49.84 C
ATOM 12 O2' C B1580 14.678 -50.130 5.992 1.00 45.68 O
ATOM 13 C1' C B1580 16.914 -49.397 5.593 1.00 51.59 C
ATOM 14 N1 C B1580 17.937 -49.231 4.542 1.00 52.01 N
ATOM 15 C2 C B1580 17.554 -49.167 3.192 1.00 58.30 C
ATOM 16 O2 C B1580 16.347 -49.266 2.896 1.00 62.51 O
ATOM 17 N3 C B1580 18.510 -49.000 2.245 1.00 57.98 N
ATOM 18 C4 C B1580 19.794 -48.902 2.602 1.00 52.40 C
ATOM 19 N4 C B1580 20.710 -48.714 1.637 1.00 49.26 N
ATOM 20 C5 C B1580 20.206 -48.981 3.959 1.00 48.84 C
ATOM 21 C6 C B1580 19.256 -49.139 4.884 1.00 49.16 C
ATOM 22 P A B1581 15.712 -54.035 4.711 1.00 55.56 P
ATOM 23 OP1 A B1581 14.415 -54.774 4.810 1.00 61.27 O
ATOM 24 OP2 A B1581 16.988 -54.728 5.065 1.00 56.30 O
ATOM 25 O5' A B1581 15.835 -53.365 3.262 1.00 52.86 O
TER
Atoms:
OP1: (31.375,-47.768,3.666)
OP2: (30.199,-49.311,5.344)
C3': (26.490,-47.247,2.766)
C1': (25.328,-49.297,2.486)
C5': (28.704,-48.225,2.033)
O6: (24.318,-52.689,7.313)
O4': (26.608,-49.428,1.905)
C8: (26.362,-50.091,4.632)
C2: (22.477,-52.054,4.347)
C6: (24.063,-52.220,6.195)
C5: (24.855,-51.367,5.412)
C4: (24.375,-50.932,4.196)
P: (30.378,-48.842,3.951)
C4': (27.226,-48.127,1.783)
C2': (25.069,-47.801,2.720)
O2': (24.305,-47.259,1.653)
N1: (22.862,-52.519,5.572)
N2: (21.290,-52.475,3.926)
N3: (23.203,-51.241,3.599)
N7: (26.111,-50.846,5.662)
N9: (25.346,-50.080,3.712)
O5': (28.957,-48.373,3.429)
O3': (26.600,-45.913,2.329)
OP2: (30.199,-49.311,5.344)
C3': (26.490,-47.247,2.766)
C1': (25.328,-49.297,2.486)
C5': (28.704,-48.225,2.033)
O6: (24.318,-52.689,7.313)
O4': (26.608,-49.428,1.905)
C8: (26.362,-50.091,4.632)
C2: (22.477,-52.054,4.347)
C6: (24.063,-52.220,6.195)
C5: (24.855,-51.367,5.412)
C4: (24.375,-50.932,4.196)
P: (30.378,-48.842,3.951)
C4': (27.226,-48.127,1.783)
C2': (25.069,-47.801,2.720)
O2': (24.305,-47.259,1.653)
N1: (22.862,-52.519,5.572)
N2: (21.290,-52.475,3.926)
N3: (23.203,-51.241,3.599)
N7: (26.111,-50.846,5.662)
N9: (25.346,-50.080,3.712)
O5': (28.957,-48.373,3.429)
O3': (26.600,-45.913,2.329)
C2: (17.554,-49.167,3.192)
OP1: (19.741,-54.706,9.342)
OP2: (21.023,-53.354,7.579)
C4: (19.794,-48.902,2.602)
O5': (18.564,-53.144,7.815)
C3': (16.498,-51.688,5.461)
C1': (16.914,-49.397,5.593)
O4': (17.557,-49.994,6.702)
C5': (18.565,-52.195,6.757)
P: (19.925,-53.446,8.591)
O2: (16.347,-49.266,2.896)
C4': (17.280,-51.417,6.722)
C2': (15.813,-50.366,5.189)
O2': (14.678,-50.130,5.992)
N1: (17.937,-49.231,4.542)
N3: (18.510,-49.000,2.245)
N4: (20.710,-48.714,1.637)
C6: (19.256,-49.139,4.884)
C5: (20.206,-48.981,3.959)
O3': (15.613,-52.760,5.665)
OP1: (19.741,-54.706,9.342)
OP2: (21.023,-53.354,7.579)
C4: (19.794,-48.902,2.602)
O5': (18.564,-53.144,7.815)
C3': (16.498,-51.688,5.461)
C1': (16.914,-49.397,5.593)
O4': (17.557,-49.994,6.702)
C5': (18.565,-52.195,6.757)
P: (19.925,-53.446,8.591)
O2: (16.347,-49.266,2.896)
C4': (17.280,-51.417,6.722)
C2': (15.813,-50.366,5.189)
O2': (14.678,-50.130,5.992)
N1: (17.937,-49.231,4.542)
N3: (18.510,-49.000,2.245)
N4: (20.710,-48.714,1.637)
C6: (19.256,-49.139,4.884)
C5: (20.206,-48.981,3.959)
O3': (15.613,-52.760,5.665)
Image (generated by PyMOL):