Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A579:A2404
Extra
PDB:
ATOM 1 O3' U A 578 101.089 -74.608 -20.185 1.00 41.05 O
ATOM 2 P G A 579 99.739 -75.467 -20.192 1.00 50.90 P
ATOM 3 OP1 G A 579 99.988 -76.743 -20.917 1.00 37.59 O
ATOM 4 OP2 G A 579 98.725 -74.535 -20.708 1.00 50.99 O
ATOM 5 O5' G A 579 99.429 -75.730 -18.637 1.00 39.71 O
ATOM 6 C5' G A 579 100.138 -76.735 -17.892 1.00 38.09 C
ATOM 7 C4' G A 579 99.969 -76.576 -16.375 1.00 36.13 C
ATOM 8 O4' G A 579 100.446 -75.276 -15.931 1.00 35.87 O
ATOM 9 C3' G A 579 98.585 -76.704 -15.758 1.00 38.05 C
ATOM 10 O3' G A 579 98.207 -78.059 -15.540 1.00 39.25 O
ATOM 11 C2' G A 579 98.749 -75.964 -14.431 1.00 41.53 C
ATOM 12 O2' G A 579 99.393 -76.733 -13.423 1.00 43.58 O
ATOM 13 C1' G A 579 99.670 -74.820 -14.834 1.00 32.86 C
ATOM 14 N9 G A 579 98.916 -73.666 -15.298 1.00 30.73 N
ATOM 15 C8 G A 579 98.481 -73.444 -16.584 1.00 35.03 C
ATOM 16 N7 G A 579 97.887 -72.296 -16.730 1.00 36.77 N
ATOM 17 C5 G A 579 97.916 -71.730 -15.470 1.00 34.35 C
ATOM 18 C6 G A 579 97.441 -70.462 -15.018 1.00 39.54 C
ATOM 19 O6 G A 579 96.840 -69.559 -15.683 1.00 36.28 O
ATOM 20 N1 G A 579 97.709 -70.281 -13.656 1.00 38.15 N
ATOM 21 C2 G A 579 98.322 -71.214 -12.839 1.00 38.39 C
ATOM 22 N2 G A 579 98.464 -70.864 -11.559 1.00 38.01 N
ATOM 23 N3 G A 579 98.756 -72.399 -13.250 1.00 34.49 N
ATOM 24 C4 G A 579 98.532 -72.581 -14.566 1.00 32.24 C
ATOM 25 P A A 580 96.842 -78.616 -16.186 1.00 40.86 P
ATOM 26 OP1 A A 580 97.231 -79.508 -17.312 1.00 37.32 O
ATOM 27 OP2 A A 580 95.982 -77.450 -16.460 1.00 38.71 O
ATOM 28 O5' A A 580 96.143 -79.487 -15.031 1.00 36.29 O
TER
ATOM 1 O3' C B2403 97.587 -67.513 -12.234 1.00 41.00 O
ATOM 2 P C B2404 96.086 -67.027 -12.528 1.00 40.94 P
ATOM 3 OP1 C B2404 95.679 -67.502 -13.885 1.00 39.29 O
ATOM 4 OP2 C B2404 96.083 -65.574 -12.219 1.00 28.17 O
ATOM 5 O5' C B2404 95.222 -67.777 -11.413 1.00 35.68 O
ATOM 6 C5' C B2404 95.164 -69.208 -11.350 1.00 39.58 C
ATOM 7 C4' C B2404 94.022 -69.671 -10.441 1.00 42.56 C
ATOM 8 O4' C B2404 94.332 -69.483 -9.023 1.00 44.50 O
ATOM 9 C3' C B2404 92.667 -69.000 -10.611 1.00 38.70 C
ATOM 10 O3' C B2404 91.950 -69.476 -11.747 1.00 37.47 O
ATOM 11 C2' C B2404 91.969 -69.318 -9.293 1.00 38.34 C
ATOM 12 O2' C B2404 91.415 -70.614 -9.329 1.00 44.72 O
ATOM 13 C1' C B2404 93.127 -69.269 -8.292 1.00 37.16 C
ATOM 14 N1 C B2404 93.207 -67.947 -7.660 1.00 35.67 N
ATOM 15 C2 C B2404 92.396 -67.633 -6.545 1.00 41.31 C
ATOM 16 O2 C B2404 91.671 -68.509 -6.035 1.00 34.15 O
ATOM 17 N3 C B2404 92.431 -66.374 -6.053 1.00 43.66 N
ATOM 18 C4 C B2404 93.237 -65.466 -6.610 1.00 39.35 C
ATOM 19 N4 C B2404 93.227 -64.231 -6.123 1.00 41.02 N
ATOM 20 C5 C B2404 94.084 -65.778 -7.696 1.00 38.54 C
ATOM 21 C6 C B2404 94.042 -67.012 -8.180 1.00 36.15 C
ATOM 22 P U B2405 91.342 -68.407 -12.800 1.00 48.20 P
ATOM 23 OP1 U B2405 90.735 -69.203 -13.908 1.00 35.08 O
ATOM 24 OP2 U B2405 92.419 -67.410 -13.106 1.00 38.37 O
ATOM 25 O5' U B2405 90.162 -67.706 -11.977 1.00 46.21 O
TER
ATOM 2 P G A 579 99.739 -75.467 -20.192 1.00 50.90 P
ATOM 3 OP1 G A 579 99.988 -76.743 -20.917 1.00 37.59 O
ATOM 4 OP2 G A 579 98.725 -74.535 -20.708 1.00 50.99 O
ATOM 5 O5' G A 579 99.429 -75.730 -18.637 1.00 39.71 O
ATOM 6 C5' G A 579 100.138 -76.735 -17.892 1.00 38.09 C
ATOM 7 C4' G A 579 99.969 -76.576 -16.375 1.00 36.13 C
ATOM 8 O4' G A 579 100.446 -75.276 -15.931 1.00 35.87 O
ATOM 9 C3' G A 579 98.585 -76.704 -15.758 1.00 38.05 C
ATOM 10 O3' G A 579 98.207 -78.059 -15.540 1.00 39.25 O
ATOM 11 C2' G A 579 98.749 -75.964 -14.431 1.00 41.53 C
ATOM 12 O2' G A 579 99.393 -76.733 -13.423 1.00 43.58 O
ATOM 13 C1' G A 579 99.670 -74.820 -14.834 1.00 32.86 C
ATOM 14 N9 G A 579 98.916 -73.666 -15.298 1.00 30.73 N
ATOM 15 C8 G A 579 98.481 -73.444 -16.584 1.00 35.03 C
ATOM 16 N7 G A 579 97.887 -72.296 -16.730 1.00 36.77 N
ATOM 17 C5 G A 579 97.916 -71.730 -15.470 1.00 34.35 C
ATOM 18 C6 G A 579 97.441 -70.462 -15.018 1.00 39.54 C
ATOM 19 O6 G A 579 96.840 -69.559 -15.683 1.00 36.28 O
ATOM 20 N1 G A 579 97.709 -70.281 -13.656 1.00 38.15 N
ATOM 21 C2 G A 579 98.322 -71.214 -12.839 1.00 38.39 C
ATOM 22 N2 G A 579 98.464 -70.864 -11.559 1.00 38.01 N
ATOM 23 N3 G A 579 98.756 -72.399 -13.250 1.00 34.49 N
ATOM 24 C4 G A 579 98.532 -72.581 -14.566 1.00 32.24 C
ATOM 25 P A A 580 96.842 -78.616 -16.186 1.00 40.86 P
ATOM 26 OP1 A A 580 97.231 -79.508 -17.312 1.00 37.32 O
ATOM 27 OP2 A A 580 95.982 -77.450 -16.460 1.00 38.71 O
ATOM 28 O5' A A 580 96.143 -79.487 -15.031 1.00 36.29 O
TER
ATOM 1 O3' C B2403 97.587 -67.513 -12.234 1.00 41.00 O
ATOM 2 P C B2404 96.086 -67.027 -12.528 1.00 40.94 P
ATOM 3 OP1 C B2404 95.679 -67.502 -13.885 1.00 39.29 O
ATOM 4 OP2 C B2404 96.083 -65.574 -12.219 1.00 28.17 O
ATOM 5 O5' C B2404 95.222 -67.777 -11.413 1.00 35.68 O
ATOM 6 C5' C B2404 95.164 -69.208 -11.350 1.00 39.58 C
ATOM 7 C4' C B2404 94.022 -69.671 -10.441 1.00 42.56 C
ATOM 8 O4' C B2404 94.332 -69.483 -9.023 1.00 44.50 O
ATOM 9 C3' C B2404 92.667 -69.000 -10.611 1.00 38.70 C
ATOM 10 O3' C B2404 91.950 -69.476 -11.747 1.00 37.47 O
ATOM 11 C2' C B2404 91.969 -69.318 -9.293 1.00 38.34 C
ATOM 12 O2' C B2404 91.415 -70.614 -9.329 1.00 44.72 O
ATOM 13 C1' C B2404 93.127 -69.269 -8.292 1.00 37.16 C
ATOM 14 N1 C B2404 93.207 -67.947 -7.660 1.00 35.67 N
ATOM 15 C2 C B2404 92.396 -67.633 -6.545 1.00 41.31 C
ATOM 16 O2 C B2404 91.671 -68.509 -6.035 1.00 34.15 O
ATOM 17 N3 C B2404 92.431 -66.374 -6.053 1.00 43.66 N
ATOM 18 C4 C B2404 93.237 -65.466 -6.610 1.00 39.35 C
ATOM 19 N4 C B2404 93.227 -64.231 -6.123 1.00 41.02 N
ATOM 20 C5 C B2404 94.084 -65.778 -7.696 1.00 38.54 C
ATOM 21 C6 C B2404 94.042 -67.012 -8.180 1.00 36.15 C
ATOM 22 P U B2405 91.342 -68.407 -12.800 1.00 48.20 P
ATOM 23 OP1 U B2405 90.735 -69.203 -13.908 1.00 35.08 O
ATOM 24 OP2 U B2405 92.419 -67.410 -13.106 1.00 38.37 O
ATOM 25 O5' U B2405 90.162 -67.706 -11.977 1.00 46.21 O
TER
Atoms:
OP1: (99.988,-76.743,-20.917)
OP2: (98.725,-74.535,-20.708)
C3': (98.585,-76.704,-15.758)
C1': (99.670,-74.820,-14.834)
C5': (100.138,-76.735,-17.892)
O6: (96.840,-69.559,-15.683)
O4': (100.446,-75.276,-15.931)
C8: (98.481,-73.444,-16.584)
C2: (98.322,-71.214,-12.839)
C6: (97.441,-70.462,-15.018)
C5: (97.916,-71.730,-15.470)
C4: (98.532,-72.581,-14.566)
P: (99.739,-75.467,-20.192)
C4': (99.969,-76.576,-16.375)
C2': (98.749,-75.964,-14.431)
O2': (99.393,-76.733,-13.423)
N1: (97.709,-70.281,-13.656)
N2: (98.464,-70.864,-11.559)
N3: (98.756,-72.399,-13.250)
N7: (97.887,-72.296,-16.730)
N9: (98.916,-73.666,-15.298)
O5': (99.429,-75.730,-18.637)
O3': (98.207,-78.059,-15.540)
OP2: (98.725,-74.535,-20.708)
C3': (98.585,-76.704,-15.758)
C1': (99.670,-74.820,-14.834)
C5': (100.138,-76.735,-17.892)
O6: (96.840,-69.559,-15.683)
O4': (100.446,-75.276,-15.931)
C8: (98.481,-73.444,-16.584)
C2: (98.322,-71.214,-12.839)
C6: (97.441,-70.462,-15.018)
C5: (97.916,-71.730,-15.470)
C4: (98.532,-72.581,-14.566)
P: (99.739,-75.467,-20.192)
C4': (99.969,-76.576,-16.375)
C2': (98.749,-75.964,-14.431)
O2': (99.393,-76.733,-13.423)
N1: (97.709,-70.281,-13.656)
N2: (98.464,-70.864,-11.559)
N3: (98.756,-72.399,-13.250)
N7: (97.887,-72.296,-16.730)
N9: (98.916,-73.666,-15.298)
O5': (99.429,-75.730,-18.637)
O3': (98.207,-78.059,-15.540)
C2: (92.396,-67.633,-6.545)
OP1: (95.679,-67.502,-13.885)
OP2: (96.083,-65.574,-12.219)
C4: (93.237,-65.466,-6.610)
O5': (95.222,-67.777,-11.413)
C3': (92.667,-69.000,-10.611)
C1': (93.127,-69.269,-8.292)
O4': (94.332,-69.483,-9.023)
C5': (95.164,-69.208,-11.350)
P: (96.086,-67.027,-12.528)
O2: (91.671,-68.509,-6.035)
C4': (94.022,-69.671,-10.441)
C2': (91.969,-69.318,-9.293)
O2': (91.415,-70.614,-9.329)
N1: (93.207,-67.947,-7.660)
N3: (92.431,-66.374,-6.053)
N4: (93.227,-64.231,-6.123)
C6: (94.042,-67.012,-8.180)
C5: (94.084,-65.778,-7.696)
O3': (91.950,-69.476,-11.747)
OP1: (95.679,-67.502,-13.885)
OP2: (96.083,-65.574,-12.219)
C4: (93.237,-65.466,-6.610)
O5': (95.222,-67.777,-11.413)
C3': (92.667,-69.000,-10.611)
C1': (93.127,-69.269,-8.292)
O4': (94.332,-69.483,-9.023)
C5': (95.164,-69.208,-11.350)
P: (96.086,-67.027,-12.528)
O2: (91.671,-68.509,-6.035)
C4': (94.022,-69.671,-10.441)
C2': (91.969,-69.318,-9.293)
O2': (91.415,-70.614,-9.329)
N1: (93.207,-67.947,-7.660)
N3: (92.431,-66.374,-6.053)
N4: (93.227,-64.231,-6.123)
C6: (94.042,-67.012,-8.180)
C5: (94.084,-65.778,-7.696)
O3': (91.950,-69.476,-11.747)
Image (generated by PyMOL):