Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A579:A2404
Extra
PDB:
ATOM 1 O3' U A 578 56.894-133.301 128.012 1.00 68.77 O
ATOM 2 P G A 579 58.272-133.297 127.202 1.00 61.70 P
ATOM 3 OP1 G A 579 58.019-134.036 125.932 1.00 57.87 O
ATOM 4 OP2 G A 579 59.301-133.792 128.158 1.00 59.81 O
ATOM 5 O5' G A 579 58.545-131.748 126.895 1.00 56.81 O
ATOM 6 C5' G A 579 57.898-131.087 125.798 1.00 59.40 C
ATOM 7 C4' G A 579 58.120-129.577 125.835 1.00 64.03 C
ATOM 8 O4' G A 579 57.624-129.046 127.089 1.00 68.92 O
ATOM 9 C3' G A 579 59.551-129.059 125.724 1.00 65.34 C
ATOM 10 O3' G A 579 59.960-128.902 124.366 1.00 68.61 O
ATOM 11 C2' G A 579 59.480-127.705 126.427 1.00 64.69 C
ATOM 12 O2' G A 579 59.027-126.654 125.582 1.00 63.90 O
ATOM 13 C1' G A 579 58.455-127.983 127.529 1.00 63.22 C
ATOM 14 N9 G A 579 59.074-128.420 128.775 1.00 56.97 N
ATOM 15 C8 G A 579 59.489-129.702 129.063 1.00 59.86 C
ATOM 16 N7 G A 579 59.963-129.827 130.270 1.00 58.63 N
ATOM 17 C5 G A 579 59.868-128.554 130.811 1.00 57.36 C
ATOM 18 C6 G A 579 60.226-128.089 132.091 1.00 59.15 C
ATOM 19 O6 G A 579 60.701-128.743 133.030 1.00 56.66 O
ATOM 20 N1 G A 579 59.974-126.721 132.232 1.00 54.73 N
ATOM 21 C2 G A 579 59.439-125.911 131.253 1.00 55.61 C
ATOM 22 N2 G A 579 59.273-124.622 131.582 1.00 55.90 N
ATOM 23 N3 G A 579 59.095-126.339 130.044 1.00 55.51 N
ATOM 24 C4 G A 579 59.334-127.665 129.895 1.00 56.98 C
ATOM 25 P A A 580 61.305-129.617 123.864 1.00 72.61 P
ATOM 26 OP1 A A 580 60.917-130.885 123.192 1.00 66.12 O
ATOM 27 OP2 A A 580 62.213-129.663 125.030 1.00 65.86 O
ATOM 28 O5' A A 580 61.930-128.610 122.783 1.00 73.76 O
TER
ATOM 1 O3' C B2403 60.025-125.663 135.093 1.00 61.09 O
ATOM 2 P C B2404 61.442-126.392 135.354 1.00 62.71 P
ATOM 3 OP1 C B2404 61.328-127.832 134.981 1.00 57.90 O
ATOM 4 OP2 C B2404 61.863-126.022 136.744 1.00 47.20 O
ATOM 5 O5' C B2404 62.454-125.631 134.377 1.00 58.37 O
ATOM 6 C5' C B2404 63.258-124.583 134.907 1.00 58.79 C
ATOM 7 C4' C B2404 63.968-123.834 133.820 1.00 60.54 C
ATOM 8 O4' C B2404 63.696-122.411 133.996 1.00 59.78 O
ATOM 9 C3' C B2404 65.465-123.984 133.989 1.00 58.79 C
ATOM 10 O3' C B2404 65.921-125.191 133.344 1.00 55.56 O
ATOM 11 C2' C B2404 65.995-122.630 133.498 1.00 58.62 C
ATOM 12 O2' C B2404 66.024-122.516 132.088 1.00 57.77 O
ATOM 13 C1' C B2404 64.902-121.674 133.987 1.00 56.89 C
ATOM 14 N1 C B2404 65.046-121.075 135.337 1.00 56.79 N
ATOM 15 C2 C B2404 65.805-119.893 135.530 1.00 61.72 C
ATOM 16 O2 C B2404 66.421-119.396 134.577 1.00 62.95 O
ATOM 17 N3 C B2404 65.837-119.326 136.762 1.00 60.30 N
ATOM 18 C4 C B2404 65.155-119.882 137.765 1.00 62.96 C
ATOM 19 N4 C B2404 65.151-119.253 138.953 1.00 63.30 N
ATOM 20 C5 C B2404 64.431-121.095 137.605 1.00 63.13 C
ATOM 21 C6 C B2404 64.407-121.651 136.392 1.00 55.33 C
ATOM 22 P U B2405 66.618-126.360 134.229 1.00 65.60 P
ATOM 23 OP1 U B2405 67.310-127.314 133.318 1.00 53.61 O
ATOM 24 OP2 U B2405 65.605-126.875 135.178 1.00 64.25 O
ATOM 25 O5' U B2405 67.727-125.594 135.080 1.00 62.53 O
TER
ATOM 2 P G A 579 58.272-133.297 127.202 1.00 61.70 P
ATOM 3 OP1 G A 579 58.019-134.036 125.932 1.00 57.87 O
ATOM 4 OP2 G A 579 59.301-133.792 128.158 1.00 59.81 O
ATOM 5 O5' G A 579 58.545-131.748 126.895 1.00 56.81 O
ATOM 6 C5' G A 579 57.898-131.087 125.798 1.00 59.40 C
ATOM 7 C4' G A 579 58.120-129.577 125.835 1.00 64.03 C
ATOM 8 O4' G A 579 57.624-129.046 127.089 1.00 68.92 O
ATOM 9 C3' G A 579 59.551-129.059 125.724 1.00 65.34 C
ATOM 10 O3' G A 579 59.960-128.902 124.366 1.00 68.61 O
ATOM 11 C2' G A 579 59.480-127.705 126.427 1.00 64.69 C
ATOM 12 O2' G A 579 59.027-126.654 125.582 1.00 63.90 O
ATOM 13 C1' G A 579 58.455-127.983 127.529 1.00 63.22 C
ATOM 14 N9 G A 579 59.074-128.420 128.775 1.00 56.97 N
ATOM 15 C8 G A 579 59.489-129.702 129.063 1.00 59.86 C
ATOM 16 N7 G A 579 59.963-129.827 130.270 1.00 58.63 N
ATOM 17 C5 G A 579 59.868-128.554 130.811 1.00 57.36 C
ATOM 18 C6 G A 579 60.226-128.089 132.091 1.00 59.15 C
ATOM 19 O6 G A 579 60.701-128.743 133.030 1.00 56.66 O
ATOM 20 N1 G A 579 59.974-126.721 132.232 1.00 54.73 N
ATOM 21 C2 G A 579 59.439-125.911 131.253 1.00 55.61 C
ATOM 22 N2 G A 579 59.273-124.622 131.582 1.00 55.90 N
ATOM 23 N3 G A 579 59.095-126.339 130.044 1.00 55.51 N
ATOM 24 C4 G A 579 59.334-127.665 129.895 1.00 56.98 C
ATOM 25 P A A 580 61.305-129.617 123.864 1.00 72.61 P
ATOM 26 OP1 A A 580 60.917-130.885 123.192 1.00 66.12 O
ATOM 27 OP2 A A 580 62.213-129.663 125.030 1.00 65.86 O
ATOM 28 O5' A A 580 61.930-128.610 122.783 1.00 73.76 O
TER
ATOM 1 O3' C B2403 60.025-125.663 135.093 1.00 61.09 O
ATOM 2 P C B2404 61.442-126.392 135.354 1.00 62.71 P
ATOM 3 OP1 C B2404 61.328-127.832 134.981 1.00 57.90 O
ATOM 4 OP2 C B2404 61.863-126.022 136.744 1.00 47.20 O
ATOM 5 O5' C B2404 62.454-125.631 134.377 1.00 58.37 O
ATOM 6 C5' C B2404 63.258-124.583 134.907 1.00 58.79 C
ATOM 7 C4' C B2404 63.968-123.834 133.820 1.00 60.54 C
ATOM 8 O4' C B2404 63.696-122.411 133.996 1.00 59.78 O
ATOM 9 C3' C B2404 65.465-123.984 133.989 1.00 58.79 C
ATOM 10 O3' C B2404 65.921-125.191 133.344 1.00 55.56 O
ATOM 11 C2' C B2404 65.995-122.630 133.498 1.00 58.62 C
ATOM 12 O2' C B2404 66.024-122.516 132.088 1.00 57.77 O
ATOM 13 C1' C B2404 64.902-121.674 133.987 1.00 56.89 C
ATOM 14 N1 C B2404 65.046-121.075 135.337 1.00 56.79 N
ATOM 15 C2 C B2404 65.805-119.893 135.530 1.00 61.72 C
ATOM 16 O2 C B2404 66.421-119.396 134.577 1.00 62.95 O
ATOM 17 N3 C B2404 65.837-119.326 136.762 1.00 60.30 N
ATOM 18 C4 C B2404 65.155-119.882 137.765 1.00 62.96 C
ATOM 19 N4 C B2404 65.151-119.253 138.953 1.00 63.30 N
ATOM 20 C5 C B2404 64.431-121.095 137.605 1.00 63.13 C
ATOM 21 C6 C B2404 64.407-121.651 136.392 1.00 55.33 C
ATOM 22 P U B2405 66.618-126.360 134.229 1.00 65.60 P
ATOM 23 OP1 U B2405 67.310-127.314 133.318 1.00 53.61 O
ATOM 24 OP2 U B2405 65.605-126.875 135.178 1.00 64.25 O
ATOM 25 O5' U B2405 67.727-125.594 135.080 1.00 62.53 O
TER
Atoms:
OP1: (58.019,-134.036,125.932)
OP2: (59.301,-133.792,128.158)
C3': (59.551,-129.059,125.724)
C1': (58.455,-127.983,127.529)
C5': (57.898,-131.087,125.798)
O6: (60.701,-128.743,133.030)
O4': (57.624,-129.046,127.089)
C8: (59.489,-129.702,129.063)
C2: (59.439,-125.911,131.253)
C6: (60.226,-128.089,132.091)
C5: (59.868,-128.554,130.811)
C4: (59.334,-127.665,129.895)
P: (58.272,-133.297,127.202)
C4': (58.120,-129.577,125.835)
C2': (59.480,-127.705,126.427)
O2': (59.027,-126.654,125.582)
N1: (59.974,-126.721,132.232)
N2: (59.273,-124.622,131.582)
N3: (59.095,-126.339,130.044)
N7: (59.963,-129.827,130.270)
N9: (59.074,-128.420,128.775)
O5': (58.545,-131.748,126.895)
O3': (59.960,-128.902,124.366)
OP2: (59.301,-133.792,128.158)
C3': (59.551,-129.059,125.724)
C1': (58.455,-127.983,127.529)
C5': (57.898,-131.087,125.798)
O6: (60.701,-128.743,133.030)
O4': (57.624,-129.046,127.089)
C8: (59.489,-129.702,129.063)
C2: (59.439,-125.911,131.253)
C6: (60.226,-128.089,132.091)
C5: (59.868,-128.554,130.811)
C4: (59.334,-127.665,129.895)
P: (58.272,-133.297,127.202)
C4': (58.120,-129.577,125.835)
C2': (59.480,-127.705,126.427)
O2': (59.027,-126.654,125.582)
N1: (59.974,-126.721,132.232)
N2: (59.273,-124.622,131.582)
N3: (59.095,-126.339,130.044)
N7: (59.963,-129.827,130.270)
N9: (59.074,-128.420,128.775)
O5': (58.545,-131.748,126.895)
O3': (59.960,-128.902,124.366)
C2: (65.805,-119.893,135.530)
OP1: (61.328,-127.832,134.981)
OP2: (61.863,-126.022,136.744)
C4: (65.155,-119.882,137.765)
O5': (62.454,-125.631,134.377)
C3': (65.465,-123.984,133.989)
C1': (64.902,-121.674,133.987)
O4': (63.696,-122.411,133.996)
C5': (63.258,-124.583,134.907)
P: (61.442,-126.392,135.354)
O2: (66.421,-119.396,134.577)
C4': (63.968,-123.834,133.820)
C2': (65.995,-122.630,133.498)
O2': (66.024,-122.516,132.088)
N1: (65.046,-121.075,135.337)
N3: (65.837,-119.326,136.762)
N4: (65.151,-119.253,138.953)
C6: (64.407,-121.651,136.392)
C5: (64.431,-121.095,137.605)
O3': (65.921,-125.191,133.344)
OP1: (61.328,-127.832,134.981)
OP2: (61.863,-126.022,136.744)
C4: (65.155,-119.882,137.765)
O5': (62.454,-125.631,134.377)
C3': (65.465,-123.984,133.989)
C1': (64.902,-121.674,133.987)
O4': (63.696,-122.411,133.996)
C5': (63.258,-124.583,134.907)
P: (61.442,-126.392,135.354)
O2: (66.421,-119.396,134.577)
C4': (63.968,-123.834,133.820)
C2': (65.995,-122.630,133.498)
O2': (66.024,-122.516,132.088)
N1: (65.046,-121.075,135.337)
N3: (65.837,-119.326,136.762)
N4: (65.151,-119.253,138.953)
C6: (64.407,-121.651,136.392)
C5: (64.431,-121.095,137.605)
O3': (65.921,-125.191,133.344)
Image (generated by PyMOL):