ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHC:A378:A359

Extra

PDB:
ATOM 1 O3' U A 377 61.921 -0.505 84.720 1.00 73.03 O
ATOM 2 P G A 378 63.469 -0.348 85.084 1.00 95.88 P
ATOM 3 OP1 G A 378 63.956 -1.670 85.570 1.00 88.77 O
ATOM 4 OP2 G A 378 63.575 0.825 85.981 1.00 95.64 O
ATOM 5 O5' G A 378 64.119 -0.014 83.673 1.00 89.39 O
ATOM 6 C5' G A 378 63.682 1.115 82.928 1.00 91.52 C
ATOM 7 C4' G A 378 64.786 1.652 82.068 1.00 94.43 C
ATOM 8 O4' G A 378 66.050 1.099 82.529 1.00 84.29 O
ATOM 9 C3' G A 378 64.682 1.286 80.597 1.00 93.41 C
ATOM 10 O3' G A 378 65.283 2.315 79.816 1.00 95.82 O
ATOM 11 C2' G A 378 65.531 0.031 80.512 1.00 89.44 C
ATOM 12 O2' G A 378 66.028 -0.243 79.227 1.00 93.69 O
ATOM 13 C1' G A 378 66.652 0.359 81.490 1.00 83.65 C
ATOM 14 N9 G A 378 67.281 -0.817 82.082 1.00 76.48 N
ATOM 15 C8 G A 378 66.671 -1.785 82.845 1.00 79.56 C
ATOM 16 N7 G A 378 67.506 -2.723 83.238 1.00 79.39 N
ATOM 17 C5 G A 378 68.743 -2.352 82.712 1.00 75.14 C
ATOM 18 C6 G A 378 70.040 -2.960 82.802 1.00 73.15 C
ATOM 19 O6 G A 378 70.393 -3.993 83.373 1.00 73.69 O
ATOM 20 N1 G A 378 71.020 -2.241 82.121 1.00 75.06 N
ATOM 21 C2 G A 378 70.783 -1.070 81.437 1.00 81.08 C
ATOM 22 N2 G A 378 71.855 -0.521 80.835 1.00 78.95 N
ATOM 23 N3 G A 378 69.581 -0.487 81.346 1.00 80.75 N
ATOM 24 C4 G A 378 68.611 -1.172 81.998 1.00 77.73 C
ATOM 25 P A A 379 64.634 2.732 78.414 1.00 94.62 P
ATOM 26 OP1 A A 379 63.706 1.641 78.034 1.00 92.61 O
ATOM 27 OP2 A A 379 65.762 3.076 77.506 1.00 73.86 O
ATOM 28 O5' A A 379 63.792 4.046 78.775 1.00 83.26 O
TER

ATOM 1 O3' U B 358 76.111 -2.996 82.109 1.00 79.98 O
ATOM 2 P C B 359 74.980 -2.972 83.246 1.00106.01 P
ATOM 3 OP1 C B 359 74.925 -4.336 83.835 1.00 93.21 O
ATOM 4 OP2 C B 359 73.740 -2.407 82.635 1.00 86.03 O
ATOM 5 O5' C B 359 75.584 -1.937 84.308 1.00117.96 O
ATOM 6 C5' C B 359 76.952 -2.005 84.729 1.00109.42 C
ATOM 7 C4' C B 359 77.305 -0.837 85.620 1.00106.27 C
ATOM 8 O4' C B 359 77.563 0.333 84.800 1.00106.99 O
ATOM 9 C3' C B 359 76.206 -0.403 86.580 1.00108.91 C
ATOM 10 O3' C B 359 76.228 -1.127 87.795 1.00105.55 O
ATOM 11 C2' C B 359 76.441 1.092 86.753 1.00108.08 C
ATOM 12 O2' C B 359 77.432 1.330 87.737 1.00112.72 O
ATOM 13 C1' C B 359 77.008 1.485 85.390 1.00105.04 C
ATOM 14 N1 C B 359 75.973 2.039 84.474 1.00107.59 N
ATOM 15 C2 C B 359 75.366 3.265 84.771 1.00111.81 C
ATOM 16 O2 C B 359 75.684 3.853 85.812 1.00119.17 O
ATOM 17 N3 C B 359 74.437 3.783 83.933 1.00109.21 N
ATOM 18 C4 C B 359 74.110 3.131 82.818 1.00109.20 C
ATOM 19 N4 C B 359 73.191 3.677 82.019 1.00105.24 N
ATOM 20 C5 C B 359 74.716 1.887 82.477 1.00107.18 C
ATOM 21 C6 C B 359 75.631 1.388 83.319 1.00106.94 C
ATOM 22 P C B 360 74.863 -1.385 88.606 1.00117.33 P
ATOM 23 OP1 C B 360 75.211 -2.253 89.761 1.00117.80 O
ATOM 24 OP2 C B 360 73.852 -1.865 87.631 1.00118.46 O
ATOM 25 O5' C B 360 74.465 0.079 89.116 1.00104.26 O
TER

Atoms:
OP1: (63.956,-1.670,85.570)
OP2: (63.575,0.825,85.981)
C3': (64.682,1.286,80.597)
C1': (66.652,0.359,81.490)
C5': (63.682,1.115,82.928)
O6: (70.393,-3.993,83.373)
O4': (66.050,1.099,82.529)
C8: (66.671,-1.785,82.845)
C2: (70.783,-1.070,81.437)
C6: (70.040,-2.960,82.802)
C5: (68.743,-2.352,82.712)
C4: (68.611,-1.172,81.998)
P: (63.469,-0.348,85.084)
C4': (64.786,1.652,82.068)
C2': (65.531,0.031,80.512)
O2': (66.028,-0.243,79.227)
N1: (71.020,-2.241,82.121)
N2: (71.855,-0.521,80.835)
N3: (69.581,-0.487,81.346)
N7: (67.506,-2.723,83.238)
N9: (67.281,-0.817,82.082)
O5': (64.119,-0.014,83.673)
O3': (65.283,2.315,79.816)
C2: (75.366,3.265,84.771)
OP1: (74.925,-4.336,83.835)
OP2: (73.740,-2.407,82.635)
C4: (74.110,3.131,82.818)
O5': (75.584,-1.937,84.308)
C3': (76.206,-0.403,86.580)
C1': (77.008,1.485,85.390)
O4': (77.563,0.333,84.800)
C5': (76.952,-2.005,84.729)
P: (74.980,-2.972,83.246)
O2: (75.684,3.853,85.812)
C4': (77.305,-0.837,85.620)
C2': (76.441,1.092,86.753)
O2': (77.432,1.330,87.737)
N1: (75.973,2.039,84.474)
N3: (74.437,3.783,83.933)
N4: (73.191,3.677,82.019)
C6: (75.631,1.388,83.319)
C5: (74.716,1.887,82.477)
O3': (76.228,-1.127,87.795)
Image (generated by PyMOL):
PyMOL image
show in jmol