Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0231:0257
Extra
PDB:
ATOM 1 O3' A A 230 92.430 106.925 3.080 1.00 49.64 O
ATOM 2 P A A 231 92.571 107.302 1.521 1.00 50.85 P
ATOM 3 OP1 A A 231 94.014 107.614 1.295 1.00 50.32 O
ATOM 4 OP2 A A 231 91.532 108.313 1.151 1.00 48.21 O
ATOM 5 O5' A A 231 92.210 105.937 0.780 1.00 50.66 O
ATOM 6 C5' A A 231 92.917 104.720 1.092 1.00 52.14 C
ATOM 7 C4' A A 231 92.210 103.531 0.484 1.00 53.45 C
ATOM 8 O4' A A 231 90.878 103.413 1.049 1.00 52.58 O
ATOM 9 C3' A A 231 91.971 103.608 -1.015 1.00 54.92 C
ATOM 10 O3' A A 231 93.141 103.199 -1.723 1.00 58.95 O
ATOM 11 C2' A A 231 90.804 102.643 -1.203 1.00 53.37 C
ATOM 12 O2' A A 231 91.210 101.286 -1.219 1.00 53.61 O
ATOM 13 C1' A A 231 89.991 102.897 0.072 1.00 50.80 C
ATOM 14 N9 A A 231 88.883 103.838 -0.094 1.00 47.10 N
ATOM 15 C8 A A 231 88.934 105.193 -0.317 1.00 45.66 C
ATOM 16 N7 A A 231 87.752 105.755 -0.445 1.00 45.19 N
ATOM 17 C5 A A 231 86.862 104.700 -0.291 1.00 44.82 C
ATOM 18 C6 A A 231 85.449 104.631 -0.330 1.00 44.48 C
ATOM 19 N6 A A 231 84.654 105.684 -0.555 1.00 44.20 N
ATOM 20 N1 A A 231 84.876 103.422 -0.137 1.00 43.87 N
ATOM 21 C2 A A 231 85.672 102.359 0.070 1.00 44.90 C
ATOM 22 N3 A A 231 87.007 102.296 0.125 1.00 45.06 N
ATOM 23 C4 A A 231 87.546 103.514 -0.066 1.00 45.66 C
ATOM 24 P C A 232 93.905 104.245 -2.681 1.00 61.70 P
ATOM 25 OP1 C A 232 95.146 103.577 -3.189 1.00 59.45 O
ATOM 26 OP2 C A 232 94.005 105.553 -1.974 1.00 60.68 O
ATOM 27 O5' C A 232 92.898 104.444 -3.893 1.00 60.81 O
TER
ATOM 1 O3' U B 256 79.751 107.714 -4.981 1.00 57.11 O
ATOM 2 P G B 257 78.558 107.196 -4.036 1.00 58.25 P
ATOM 3 OP1 G B 257 77.818 106.135 -4.782 1.00 57.78 O
ATOM 4 OP2 G B 257 77.823 108.388 -3.534 1.00 58.21 O
ATOM 5 O5' G B 257 79.307 106.518 -2.804 1.00 55.54 O
ATOM 6 C5' G B 257 79.965 105.249 -2.938 1.00 54.14 C
ATOM 7 C4' G B 257 80.508 104.818 -1.601 1.00 54.42 C
ATOM 8 O4' G B 257 81.539 105.753 -1.181 1.00 55.07 O
ATOM 9 C3' G B 257 79.483 104.840 -0.481 1.00 54.11 C
ATOM 10 O3' G B 257 78.744 103.618 -0.462 1.00 56.40 O
ATOM 11 C2' G B 257 80.352 105.054 0.752 1.00 53.62 C
ATOM 12 O2' G B 257 80.986 103.862 1.180 1.00 54.35 O
ATOM 13 C1' G B 257 81.416 106.015 0.206 1.00 52.58 C
ATOM 14 N9 G B 257 81.119 107.439 0.363 1.00 49.84 N
ATOM 15 C8 G B 257 80.057 108.130 -0.178 1.00 49.77 C
ATOM 16 N7 G B 257 80.062 109.401 0.124 1.00 48.09 N
ATOM 17 C5 G B 257 81.190 109.563 0.918 1.00 46.35 C
ATOM 18 C6 G B 257 81.704 110.724 1.556 1.00 44.61 C
ATOM 19 O6 G B 257 81.245 111.879 1.546 1.00 43.15 O
ATOM 20 N1 G B 257 82.867 110.442 2.266 1.00 42.27 N
ATOM 21 C2 G B 257 83.457 109.202 2.359 1.00 44.99 C
ATOM 22 N2 G B 257 84.572 109.125 3.104 1.00 44.36 N
ATOM 23 N3 G B 257 82.987 108.112 1.771 1.00 46.48 N
ATOM 24 C4 G B 257 81.857 108.363 1.074 1.00 47.52 C
ATOM 25 P U B 258 77.253 103.589 0.144 1.00 57.18 P
ATOM 26 OP1 U B 258 76.595 102.321 -0.267 1.00 57.93 O
ATOM 27 OP2 U B 258 76.596 104.886 -0.179 1.00 56.62 O
ATOM 28 O5' U B 258 77.510 103.501 1.714 1.00 58.40 O
TER
ATOM 2 P A A 231 92.571 107.302 1.521 1.00 50.85 P
ATOM 3 OP1 A A 231 94.014 107.614 1.295 1.00 50.32 O
ATOM 4 OP2 A A 231 91.532 108.313 1.151 1.00 48.21 O
ATOM 5 O5' A A 231 92.210 105.937 0.780 1.00 50.66 O
ATOM 6 C5' A A 231 92.917 104.720 1.092 1.00 52.14 C
ATOM 7 C4' A A 231 92.210 103.531 0.484 1.00 53.45 C
ATOM 8 O4' A A 231 90.878 103.413 1.049 1.00 52.58 O
ATOM 9 C3' A A 231 91.971 103.608 -1.015 1.00 54.92 C
ATOM 10 O3' A A 231 93.141 103.199 -1.723 1.00 58.95 O
ATOM 11 C2' A A 231 90.804 102.643 -1.203 1.00 53.37 C
ATOM 12 O2' A A 231 91.210 101.286 -1.219 1.00 53.61 O
ATOM 13 C1' A A 231 89.991 102.897 0.072 1.00 50.80 C
ATOM 14 N9 A A 231 88.883 103.838 -0.094 1.00 47.10 N
ATOM 15 C8 A A 231 88.934 105.193 -0.317 1.00 45.66 C
ATOM 16 N7 A A 231 87.752 105.755 -0.445 1.00 45.19 N
ATOM 17 C5 A A 231 86.862 104.700 -0.291 1.00 44.82 C
ATOM 18 C6 A A 231 85.449 104.631 -0.330 1.00 44.48 C
ATOM 19 N6 A A 231 84.654 105.684 -0.555 1.00 44.20 N
ATOM 20 N1 A A 231 84.876 103.422 -0.137 1.00 43.87 N
ATOM 21 C2 A A 231 85.672 102.359 0.070 1.00 44.90 C
ATOM 22 N3 A A 231 87.007 102.296 0.125 1.00 45.06 N
ATOM 23 C4 A A 231 87.546 103.514 -0.066 1.00 45.66 C
ATOM 24 P C A 232 93.905 104.245 -2.681 1.00 61.70 P
ATOM 25 OP1 C A 232 95.146 103.577 -3.189 1.00 59.45 O
ATOM 26 OP2 C A 232 94.005 105.553 -1.974 1.00 60.68 O
ATOM 27 O5' C A 232 92.898 104.444 -3.893 1.00 60.81 O
TER
ATOM 1 O3' U B 256 79.751 107.714 -4.981 1.00 57.11 O
ATOM 2 P G B 257 78.558 107.196 -4.036 1.00 58.25 P
ATOM 3 OP1 G B 257 77.818 106.135 -4.782 1.00 57.78 O
ATOM 4 OP2 G B 257 77.823 108.388 -3.534 1.00 58.21 O
ATOM 5 O5' G B 257 79.307 106.518 -2.804 1.00 55.54 O
ATOM 6 C5' G B 257 79.965 105.249 -2.938 1.00 54.14 C
ATOM 7 C4' G B 257 80.508 104.818 -1.601 1.00 54.42 C
ATOM 8 O4' G B 257 81.539 105.753 -1.181 1.00 55.07 O
ATOM 9 C3' G B 257 79.483 104.840 -0.481 1.00 54.11 C
ATOM 10 O3' G B 257 78.744 103.618 -0.462 1.00 56.40 O
ATOM 11 C2' G B 257 80.352 105.054 0.752 1.00 53.62 C
ATOM 12 O2' G B 257 80.986 103.862 1.180 1.00 54.35 O
ATOM 13 C1' G B 257 81.416 106.015 0.206 1.00 52.58 C
ATOM 14 N9 G B 257 81.119 107.439 0.363 1.00 49.84 N
ATOM 15 C8 G B 257 80.057 108.130 -0.178 1.00 49.77 C
ATOM 16 N7 G B 257 80.062 109.401 0.124 1.00 48.09 N
ATOM 17 C5 G B 257 81.190 109.563 0.918 1.00 46.35 C
ATOM 18 C6 G B 257 81.704 110.724 1.556 1.00 44.61 C
ATOM 19 O6 G B 257 81.245 111.879 1.546 1.00 43.15 O
ATOM 20 N1 G B 257 82.867 110.442 2.266 1.00 42.27 N
ATOM 21 C2 G B 257 83.457 109.202 2.359 1.00 44.99 C
ATOM 22 N2 G B 257 84.572 109.125 3.104 1.00 44.36 N
ATOM 23 N3 G B 257 82.987 108.112 1.771 1.00 46.48 N
ATOM 24 C4 G B 257 81.857 108.363 1.074 1.00 47.52 C
ATOM 25 P U B 258 77.253 103.589 0.144 1.00 57.18 P
ATOM 26 OP1 U B 258 76.595 102.321 -0.267 1.00 57.93 O
ATOM 27 OP2 U B 258 76.596 104.886 -0.179 1.00 56.62 O
ATOM 28 O5' U B 258 77.510 103.501 1.714 1.00 58.40 O
TER
Atoms:
OP1: (94.014,107.614,1.295)
OP2: (91.532,108.313,1.151)
C3': (91.971,103.608,-1.015)
C1': (89.991,102.897,0.072)
C5': (92.917,104.720,1.092)
O4': (90.878,103.413,1.049)
C8: (88.934,105.193,-0.317)
O2': (91.210,101.286,-1.219)
C6: (85.449,104.631,-0.330)
C5: (86.862,104.700,-0.291)
C4: (87.546,103.514,-0.066)
P: (92.571,107.302,1.521)
C4': (92.210,103.531,0.484)
C2': (90.804,102.643,-1.203)
C2: (85.672,102.359,0.070)
N1: (84.876,103.422,-0.137)
N3: (87.007,102.296,0.125)
N6: (84.654,105.684,-0.555)
N7: (87.752,105.755,-0.445)
N9: (88.883,103.838,-0.094)
O5': (92.210,105.937,0.780)
O3': (93.141,103.199,-1.723)
OP2: (91.532,108.313,1.151)
C3': (91.971,103.608,-1.015)
C1': (89.991,102.897,0.072)
C5': (92.917,104.720,1.092)
O4': (90.878,103.413,1.049)
C8: (88.934,105.193,-0.317)
O2': (91.210,101.286,-1.219)
C6: (85.449,104.631,-0.330)
C5: (86.862,104.700,-0.291)
C4: (87.546,103.514,-0.066)
P: (92.571,107.302,1.521)
C4': (92.210,103.531,0.484)
C2': (90.804,102.643,-1.203)
C2: (85.672,102.359,0.070)
N1: (84.876,103.422,-0.137)
N3: (87.007,102.296,0.125)
N6: (84.654,105.684,-0.555)
N7: (87.752,105.755,-0.445)
N9: (88.883,103.838,-0.094)
O5': (92.210,105.937,0.780)
O3': (93.141,103.199,-1.723)
OP1: (77.818,106.135,-4.782)
OP2: (77.823,108.388,-3.534)
C3': (79.483,104.840,-0.481)
C1': (81.416,106.015,0.206)
C5': (79.965,105.249,-2.938)
O6: (81.245,111.879,1.546)
O4': (81.539,105.753,-1.181)
C8: (80.057,108.130,-0.178)
C2: (83.457,109.202,2.359)
C6: (81.704,110.724,1.556)
C5: (81.190,109.563,0.918)
C4: (81.857,108.363,1.074)
P: (78.558,107.196,-4.036)
C4': (80.508,104.818,-1.601)
C2': (80.352,105.054,0.752)
O2': (80.986,103.862,1.180)
N1: (82.867,110.442,2.266)
N2: (84.572,109.125,3.104)
N3: (82.987,108.112,1.771)
N7: (80.062,109.401,0.124)
N9: (81.119,107.439,0.363)
O5': (79.307,106.518,-2.804)
O3': (78.744,103.618,-0.462)
OP2: (77.823,108.388,-3.534)
C3': (79.483,104.840,-0.481)
C1': (81.416,106.015,0.206)
C5': (79.965,105.249,-2.938)
O6: (81.245,111.879,1.546)
O4': (81.539,105.753,-1.181)
C8: (80.057,108.130,-0.178)
C2: (83.457,109.202,2.359)
C6: (81.704,110.724,1.556)
C5: (81.190,109.563,0.918)
C4: (81.857,108.363,1.074)
P: (78.558,107.196,-4.036)
C4': (80.508,104.818,-1.601)
C2': (80.352,105.054,0.752)
O2': (80.986,103.862,1.180)
N1: (82.867,110.442,2.266)
N2: (84.572,109.125,3.104)
N3: (82.987,108.112,1.771)
N7: (80.062,109.401,0.124)
N9: (81.119,107.439,0.363)
O5': (79.307,106.518,-2.804)
O3': (78.744,103.618,-0.462)
Image (generated by PyMOL):