Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11807:11810
Extra
PDB:
ATOM 1 O3' U A1806 5.912 56.996 99.683 1.00 56.95 O
ATOM 2 P G A1807 4.559 56.721 100.476 1.00 60.51 P
ATOM 3 OP1 G A1807 3.472 57.224 99.629 1.00 60.74 O
ATOM 4 OP2 G A1807 4.717 57.252 101.831 1.00 61.01 O
ATOM 5 O5' G A1807 4.487 55.162 100.542 1.00 59.86 O
ATOM 6 C5' G A1807 3.863 54.438 99.517 1.00 59.45 C
ATOM 7 C4' G A1807 4.299 53.029 99.570 1.00 58.79 C
ATOM 8 O4' G A1807 5.718 52.983 99.863 1.00 58.60 O
ATOM 9 C3' G A1807 3.692 52.222 100.676 1.00 58.80 C
ATOM 10 O3' G A1807 2.346 51.846 100.404 1.00 58.83 O
ATOM 11 C2' G A1807 4.698 51.063 100.801 1.00 58.19 C
ATOM 12 O2' G A1807 4.526 50.080 99.774 1.00 57.61 O
ATOM 13 C1' G A1807 6.025 51.801 100.559 1.00 58.21 C
ATOM 14 N9 G A1807 6.633 52.145 101.837 1.00 58.54 N
ATOM 15 C8 G A1807 6.297 53.183 102.646 1.00 59.20 C
ATOM 16 N7 G A1807 6.898 53.152 103.794 1.00 59.36 N
ATOM 17 C5 G A1807 7.626 51.996 103.725 1.00 58.76 C
ATOM 18 C6 G A1807 8.465 51.443 104.686 1.00 58.64 C
ATOM 19 O6 G A1807 8.707 51.899 105.802 1.00 59.06 O
ATOM 20 N1 G A1807 9.035 50.271 104.237 1.00 57.97 N
ATOM 21 C2 G A1807 8.793 49.727 103.028 1.00 57.51 C
ATOM 22 N2 G A1807 9.421 48.593 102.822 1.00 56.93 N
ATOM 23 N3 G A1807 8.004 50.220 102.121 1.00 57.61 N
ATOM 24 C4 G A1807 7.460 51.349 102.545 1.00 58.24 C
ATOM 25 P A A1808 1.235 51.928 101.552 1.00 58.92 P
ATOM 26 OP1 A A1808 -0.078 52.072 100.900 1.00 59.08 O
ATOM 27 OP2 A A1808 1.659 52.958 102.510 1.00 59.48 O
ATOM 28 O5' A A1808 1.347 50.506 102.218 1.00 58.47 O
TER
ATOM 1 O3' A B1809 8.735 46.857 106.926 1.00 57.28 O
ATOM 2 P C B1810 10.070 47.748 107.010 1.00 64.27 P
ATOM 3 OP1 C B1810 10.364 48.002 108.452 1.00 64.71 O
ATOM 4 OP2 C B1810 9.885 48.902 106.107 1.00 64.51 O
ATOM 5 O5' C B1810 11.147 46.762 106.417 1.00 63.60 O
ATOM 6 C5' C B1810 11.472 45.575 107.110 1.00 63.30 C
ATOM 7 C4' C B1810 12.665 44.895 106.520 1.00 62.75 C
ATOM 8 O4' C B1810 13.241 44.055 107.541 1.00 62.64 O
ATOM 9 C3' C B1810 12.348 43.984 105.348 1.00 62.16 C
ATOM 10 O3' C B1810 13.494 43.850 104.499 1.00 61.76 O
ATOM 11 C2' C B1810 12.064 42.667 106.049 1.00 61.91 C
ATOM 12 O2' C B1810 12.213 41.513 105.249 1.00 61.30 O
ATOM 13 C1' C B1810 13.066 42.700 107.208 1.00 62.10 C
ATOM 14 N1 C B1810 12.564 42.015 108.391 1.00 62.23 N
ATOM 15 C2 C B1810 13.098 40.782 108.758 1.00 61.85 C
ATOM 16 O2 C B1810 14.042 40.359 108.100 1.00 61.42 O
ATOM 17 N3 C B1810 12.597 40.098 109.823 1.00 61.97 N
ATOM 18 C4 C B1810 11.575 40.632 110.502 1.00 62.46 C
ATOM 19 N4 C B1810 11.099 39.955 111.556 1.00 62.59 N
ATOM 20 C5 C B1810 10.983 41.891 110.121 1.00 62.86 C
ATOM 21 C6 C B1810 11.486 42.542 109.061 1.00 62.73 C
ATOM 22 P A B1811 13.650 44.800 103.214 1.00 55.45 P
ATOM 23 OP1 A B1811 15.075 44.662 102.718 1.00 55.12 O
ATOM 24 OP2 A B1811 13.154 46.128 103.607 1.00 56.09 O
ATOM 25 O5' A B1811 12.647 44.169 102.167 1.00 55.11 O
TER
ATOM 2 P G A1807 4.559 56.721 100.476 1.00 60.51 P
ATOM 3 OP1 G A1807 3.472 57.224 99.629 1.00 60.74 O
ATOM 4 OP2 G A1807 4.717 57.252 101.831 1.00 61.01 O
ATOM 5 O5' G A1807 4.487 55.162 100.542 1.00 59.86 O
ATOM 6 C5' G A1807 3.863 54.438 99.517 1.00 59.45 C
ATOM 7 C4' G A1807 4.299 53.029 99.570 1.00 58.79 C
ATOM 8 O4' G A1807 5.718 52.983 99.863 1.00 58.60 O
ATOM 9 C3' G A1807 3.692 52.222 100.676 1.00 58.80 C
ATOM 10 O3' G A1807 2.346 51.846 100.404 1.00 58.83 O
ATOM 11 C2' G A1807 4.698 51.063 100.801 1.00 58.19 C
ATOM 12 O2' G A1807 4.526 50.080 99.774 1.00 57.61 O
ATOM 13 C1' G A1807 6.025 51.801 100.559 1.00 58.21 C
ATOM 14 N9 G A1807 6.633 52.145 101.837 1.00 58.54 N
ATOM 15 C8 G A1807 6.297 53.183 102.646 1.00 59.20 C
ATOM 16 N7 G A1807 6.898 53.152 103.794 1.00 59.36 N
ATOM 17 C5 G A1807 7.626 51.996 103.725 1.00 58.76 C
ATOM 18 C6 G A1807 8.465 51.443 104.686 1.00 58.64 C
ATOM 19 O6 G A1807 8.707 51.899 105.802 1.00 59.06 O
ATOM 20 N1 G A1807 9.035 50.271 104.237 1.00 57.97 N
ATOM 21 C2 G A1807 8.793 49.727 103.028 1.00 57.51 C
ATOM 22 N2 G A1807 9.421 48.593 102.822 1.00 56.93 N
ATOM 23 N3 G A1807 8.004 50.220 102.121 1.00 57.61 N
ATOM 24 C4 G A1807 7.460 51.349 102.545 1.00 58.24 C
ATOM 25 P A A1808 1.235 51.928 101.552 1.00 58.92 P
ATOM 26 OP1 A A1808 -0.078 52.072 100.900 1.00 59.08 O
ATOM 27 OP2 A A1808 1.659 52.958 102.510 1.00 59.48 O
ATOM 28 O5' A A1808 1.347 50.506 102.218 1.00 58.47 O
TER
ATOM 1 O3' A B1809 8.735 46.857 106.926 1.00 57.28 O
ATOM 2 P C B1810 10.070 47.748 107.010 1.00 64.27 P
ATOM 3 OP1 C B1810 10.364 48.002 108.452 1.00 64.71 O
ATOM 4 OP2 C B1810 9.885 48.902 106.107 1.00 64.51 O
ATOM 5 O5' C B1810 11.147 46.762 106.417 1.00 63.60 O
ATOM 6 C5' C B1810 11.472 45.575 107.110 1.00 63.30 C
ATOM 7 C4' C B1810 12.665 44.895 106.520 1.00 62.75 C
ATOM 8 O4' C B1810 13.241 44.055 107.541 1.00 62.64 O
ATOM 9 C3' C B1810 12.348 43.984 105.348 1.00 62.16 C
ATOM 10 O3' C B1810 13.494 43.850 104.499 1.00 61.76 O
ATOM 11 C2' C B1810 12.064 42.667 106.049 1.00 61.91 C
ATOM 12 O2' C B1810 12.213 41.513 105.249 1.00 61.30 O
ATOM 13 C1' C B1810 13.066 42.700 107.208 1.00 62.10 C
ATOM 14 N1 C B1810 12.564 42.015 108.391 1.00 62.23 N
ATOM 15 C2 C B1810 13.098 40.782 108.758 1.00 61.85 C
ATOM 16 O2 C B1810 14.042 40.359 108.100 1.00 61.42 O
ATOM 17 N3 C B1810 12.597 40.098 109.823 1.00 61.97 N
ATOM 18 C4 C B1810 11.575 40.632 110.502 1.00 62.46 C
ATOM 19 N4 C B1810 11.099 39.955 111.556 1.00 62.59 N
ATOM 20 C5 C B1810 10.983 41.891 110.121 1.00 62.86 C
ATOM 21 C6 C B1810 11.486 42.542 109.061 1.00 62.73 C
ATOM 22 P A B1811 13.650 44.800 103.214 1.00 55.45 P
ATOM 23 OP1 A B1811 15.075 44.662 102.718 1.00 55.12 O
ATOM 24 OP2 A B1811 13.154 46.128 103.607 1.00 56.09 O
ATOM 25 O5' A B1811 12.647 44.169 102.167 1.00 55.11 O
TER
Atoms:
OP1: (3.472,57.224,99.629)
OP2: (4.717,57.252,101.831)
C3': (3.692,52.222,100.676)
C1': (6.025,51.801,100.559)
C5': (3.863,54.438,99.517)
O6: (8.707,51.899,105.802)
O4': (5.718,52.983,99.863)
C8: (6.297,53.183,102.646)
C2: (8.793,49.727,103.028)
C6: (8.465,51.443,104.686)
C5: (7.626,51.996,103.725)
C4: (7.460,51.349,102.545)
P: (4.559,56.721,100.476)
C4': (4.299,53.029,99.570)
C2': (4.698,51.063,100.801)
O2': (4.526,50.080,99.774)
N1: (9.035,50.271,104.237)
N2: (9.421,48.593,102.822)
N3: (8.004,50.220,102.121)
N7: (6.898,53.152,103.794)
N9: (6.633,52.145,101.837)
O5': (4.487,55.162,100.542)
O3': (2.346,51.846,100.404)
OP2: (4.717,57.252,101.831)
C3': (3.692,52.222,100.676)
C1': (6.025,51.801,100.559)
C5': (3.863,54.438,99.517)
O6: (8.707,51.899,105.802)
O4': (5.718,52.983,99.863)
C8: (6.297,53.183,102.646)
C2: (8.793,49.727,103.028)
C6: (8.465,51.443,104.686)
C5: (7.626,51.996,103.725)
C4: (7.460,51.349,102.545)
P: (4.559,56.721,100.476)
C4': (4.299,53.029,99.570)
C2': (4.698,51.063,100.801)
O2': (4.526,50.080,99.774)
N1: (9.035,50.271,104.237)
N2: (9.421,48.593,102.822)
N3: (8.004,50.220,102.121)
N7: (6.898,53.152,103.794)
N9: (6.633,52.145,101.837)
O5': (4.487,55.162,100.542)
O3': (2.346,51.846,100.404)
C2: (13.098,40.782,108.758)
OP1: (10.364,48.002,108.452)
OP2: (9.885,48.902,106.107)
C4: (11.575,40.632,110.502)
O5': (11.147,46.762,106.417)
C3': (12.348,43.984,105.348)
C1': (13.066,42.700,107.208)
O4': (13.241,44.055,107.541)
C5': (11.472,45.575,107.110)
P: (10.070,47.748,107.010)
O2: (14.042,40.359,108.100)
C4': (12.665,44.895,106.520)
C2': (12.064,42.667,106.049)
O2': (12.213,41.513,105.249)
N1: (12.564,42.015,108.391)
N3: (12.597,40.098,109.823)
N4: (11.099,39.955,111.556)
C6: (11.486,42.542,109.061)
C5: (10.983,41.891,110.121)
O3': (13.494,43.850,104.499)
OP1: (10.364,48.002,108.452)
OP2: (9.885,48.902,106.107)
C4: (11.575,40.632,110.502)
O5': (11.147,46.762,106.417)
C3': (12.348,43.984,105.348)
C1': (13.066,42.700,107.208)
O4': (13.241,44.055,107.541)
C5': (11.472,45.575,107.110)
P: (10.070,47.748,107.010)
O2: (14.042,40.359,108.100)
C4': (12.665,44.895,106.520)
C2': (12.064,42.667,106.049)
O2': (12.213,41.513,105.249)
N1: (12.564,42.015,108.391)
N3: (12.597,40.098,109.823)
N4: (11.099,39.955,111.556)
C6: (11.486,42.542,109.061)
C5: (10.983,41.891,110.121)
O3': (13.494,43.850,104.499)
Image (generated by PyMOL):