Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:034:0135
Extra
PDB:
ATOM 1 O3' U A 33 64.176 139.225 24.998 1.00 41.91 O
ATOM 2 P G A 34 65.306 139.745 23.984 1.00 42.18 P
ATOM 3 OP1 G A 34 64.802 141.051 23.465 1.00 40.09 O
ATOM 4 OP2 G A 34 65.650 138.656 23.035 1.00 40.11 O
ATOM 5 O5' G A 34 66.580 139.982 24.919 1.00 40.72 O
ATOM 6 C5' G A 34 66.616 141.074 25.861 1.00 39.23 C
ATOM 7 C4' G A 34 67.990 141.206 26.472 1.00 38.05 C
ATOM 8 O4' G A 34 68.226 140.125 27.407 1.00 39.95 O
ATOM 9 C3' G A 34 69.174 141.120 25.528 1.00 38.08 C
ATOM 10 O3' G A 34 69.401 142.334 24.824 1.00 38.87 O
ATOM 11 C2' G A 34 70.307 140.796 26.491 1.00 38.45 C
ATOM 12 O2' G A 34 70.739 141.920 27.223 1.00 38.04 O
ATOM 13 C1' G A 34 69.616 139.823 27.446 1.00 38.64 C
ATOM 14 N9 G A 34 69.803 138.435 27.034 1.00 36.14 N
ATOM 15 C8 G A 34 68.916 137.662 26.328 1.00 36.68 C
ATOM 16 N7 G A 34 69.376 136.473 26.058 1.00 36.69 N
ATOM 17 C5 G A 34 70.640 136.456 26.625 1.00 34.38 C
ATOM 18 C6 G A 34 71.622 135.440 26.631 1.00 34.59 C
ATOM 19 O6 G A 34 71.575 134.319 26.104 1.00 36.98 O
ATOM 20 N1 G A 34 72.759 135.831 27.326 1.00 33.85 N
ATOM 21 C2 G A 34 72.932 137.046 27.928 1.00 33.67 C
ATOM 22 N2 G A 34 74.101 137.219 28.551 1.00 33.86 N
ATOM 23 N3 G A 34 72.026 138.014 27.918 1.00 33.23 N
ATOM 24 C4 G A 34 70.913 137.652 27.250 1.00 34.21 C
ATOM 25 P A A 35 70.091 142.299 23.366 1.00 39.12 P
ATOM 26 OP1 A A 35 69.045 142.666 22.376 1.00 38.50 O
ATOM 27 OP2 A A 35 70.855 141.040 23.183 1.00 38.86 O
ATOM 28 O5' A A 35 71.178 143.458 23.442 1.00 39.18 O
TER
ATOM 1 O3' U B 134 77.491 133.430 26.962 1.00 34.89 O
ATOM 2 P G B 135 76.112 133.876 27.664 1.00 38.10 P
ATOM 3 OP1 G B 135 75.394 132.631 28.053 1.00 41.03 O
ATOM 4 OP2 G B 135 75.395 134.895 26.864 1.00 36.96 O
ATOM 5 O5' G B 135 76.615 134.591 28.990 1.00 38.52 O
ATOM 6 C5' G B 135 77.684 134.020 29.753 1.00 37.36 C
ATOM 7 C4' G B 135 78.267 135.045 30.684 1.00 36.91 C
ATOM 8 O4' G B 135 79.019 136.028 29.921 1.00 37.91 O
ATOM 9 C3' G B 135 77.252 135.829 31.511 1.00 36.66 C
ATOM 10 O3' G B 135 77.800 136.062 32.796 1.00 35.87 O
ATOM 11 C2' G B 135 77.165 137.151 30.761 1.00 36.99 C
ATOM 12 O2' G B 135 76.761 138.215 31.596 1.00 36.41 O
ATOM 13 C1' G B 135 78.613 137.317 30.316 1.00 38.01 C
ATOM 14 N9 G B 135 78.860 138.258 29.227 1.00 41.45 N
ATOM 15 C8 G B 135 79.815 139.246 29.223 1.00 42.24 C
ATOM 16 N7 G B 135 79.786 139.983 28.149 1.00 43.58 N
ATOM 17 C5 G B 135 78.756 139.449 27.390 1.00 43.26 C
ATOM 18 C6 G B 135 78.239 139.856 26.138 1.00 43.13 C
ATOM 19 O6 G B 135 78.580 140.811 25.439 1.00 44.51 O
ATOM 20 N1 G B 135 77.205 139.032 25.722 1.00 44.02 N
ATOM 21 C2 G B 135 76.715 137.966 26.427 1.00 43.42 C
ATOM 22 N2 G B 135 75.713 137.298 25.850 1.00 44.03 N
ATOM 23 N3 G B 135 77.172 137.586 27.608 1.00 43.22 N
ATOM 24 C4 G B 135 78.187 138.367 28.028 1.00 42.72 C
ATOM 25 P A B 136 77.297 135.191 34.037 1.00 34.55 P
ATOM 26 OP1 A B 136 78.244 135.423 35.153 1.00 33.92 O
ATOM 27 OP2 A B 136 77.059 133.808 33.559 1.00 34.56 O
ATOM 28 O5' A B 136 75.902 135.848 34.411 1.00 31.93 O
TER
ATOM 2 P G A 34 65.306 139.745 23.984 1.00 42.18 P
ATOM 3 OP1 G A 34 64.802 141.051 23.465 1.00 40.09 O
ATOM 4 OP2 G A 34 65.650 138.656 23.035 1.00 40.11 O
ATOM 5 O5' G A 34 66.580 139.982 24.919 1.00 40.72 O
ATOM 6 C5' G A 34 66.616 141.074 25.861 1.00 39.23 C
ATOM 7 C4' G A 34 67.990 141.206 26.472 1.00 38.05 C
ATOM 8 O4' G A 34 68.226 140.125 27.407 1.00 39.95 O
ATOM 9 C3' G A 34 69.174 141.120 25.528 1.00 38.08 C
ATOM 10 O3' G A 34 69.401 142.334 24.824 1.00 38.87 O
ATOM 11 C2' G A 34 70.307 140.796 26.491 1.00 38.45 C
ATOM 12 O2' G A 34 70.739 141.920 27.223 1.00 38.04 O
ATOM 13 C1' G A 34 69.616 139.823 27.446 1.00 38.64 C
ATOM 14 N9 G A 34 69.803 138.435 27.034 1.00 36.14 N
ATOM 15 C8 G A 34 68.916 137.662 26.328 1.00 36.68 C
ATOM 16 N7 G A 34 69.376 136.473 26.058 1.00 36.69 N
ATOM 17 C5 G A 34 70.640 136.456 26.625 1.00 34.38 C
ATOM 18 C6 G A 34 71.622 135.440 26.631 1.00 34.59 C
ATOM 19 O6 G A 34 71.575 134.319 26.104 1.00 36.98 O
ATOM 20 N1 G A 34 72.759 135.831 27.326 1.00 33.85 N
ATOM 21 C2 G A 34 72.932 137.046 27.928 1.00 33.67 C
ATOM 22 N2 G A 34 74.101 137.219 28.551 1.00 33.86 N
ATOM 23 N3 G A 34 72.026 138.014 27.918 1.00 33.23 N
ATOM 24 C4 G A 34 70.913 137.652 27.250 1.00 34.21 C
ATOM 25 P A A 35 70.091 142.299 23.366 1.00 39.12 P
ATOM 26 OP1 A A 35 69.045 142.666 22.376 1.00 38.50 O
ATOM 27 OP2 A A 35 70.855 141.040 23.183 1.00 38.86 O
ATOM 28 O5' A A 35 71.178 143.458 23.442 1.00 39.18 O
TER
ATOM 1 O3' U B 134 77.491 133.430 26.962 1.00 34.89 O
ATOM 2 P G B 135 76.112 133.876 27.664 1.00 38.10 P
ATOM 3 OP1 G B 135 75.394 132.631 28.053 1.00 41.03 O
ATOM 4 OP2 G B 135 75.395 134.895 26.864 1.00 36.96 O
ATOM 5 O5' G B 135 76.615 134.591 28.990 1.00 38.52 O
ATOM 6 C5' G B 135 77.684 134.020 29.753 1.00 37.36 C
ATOM 7 C4' G B 135 78.267 135.045 30.684 1.00 36.91 C
ATOM 8 O4' G B 135 79.019 136.028 29.921 1.00 37.91 O
ATOM 9 C3' G B 135 77.252 135.829 31.511 1.00 36.66 C
ATOM 10 O3' G B 135 77.800 136.062 32.796 1.00 35.87 O
ATOM 11 C2' G B 135 77.165 137.151 30.761 1.00 36.99 C
ATOM 12 O2' G B 135 76.761 138.215 31.596 1.00 36.41 O
ATOM 13 C1' G B 135 78.613 137.317 30.316 1.00 38.01 C
ATOM 14 N9 G B 135 78.860 138.258 29.227 1.00 41.45 N
ATOM 15 C8 G B 135 79.815 139.246 29.223 1.00 42.24 C
ATOM 16 N7 G B 135 79.786 139.983 28.149 1.00 43.58 N
ATOM 17 C5 G B 135 78.756 139.449 27.390 1.00 43.26 C
ATOM 18 C6 G B 135 78.239 139.856 26.138 1.00 43.13 C
ATOM 19 O6 G B 135 78.580 140.811 25.439 1.00 44.51 O
ATOM 20 N1 G B 135 77.205 139.032 25.722 1.00 44.02 N
ATOM 21 C2 G B 135 76.715 137.966 26.427 1.00 43.42 C
ATOM 22 N2 G B 135 75.713 137.298 25.850 1.00 44.03 N
ATOM 23 N3 G B 135 77.172 137.586 27.608 1.00 43.22 N
ATOM 24 C4 G B 135 78.187 138.367 28.028 1.00 42.72 C
ATOM 25 P A B 136 77.297 135.191 34.037 1.00 34.55 P
ATOM 26 OP1 A B 136 78.244 135.423 35.153 1.00 33.92 O
ATOM 27 OP2 A B 136 77.059 133.808 33.559 1.00 34.56 O
ATOM 28 O5' A B 136 75.902 135.848 34.411 1.00 31.93 O
TER
Atoms:
OP1: (64.802,141.051,23.465)
OP2: (65.650,138.656,23.035)
C3': (69.174,141.120,25.528)
C1': (69.616,139.823,27.446)
C5': (66.616,141.074,25.861)
O6: (71.575,134.319,26.104)
O4': (68.226,140.125,27.407)
C8: (68.916,137.662,26.328)
C2: (72.932,137.046,27.928)
C6: (71.622,135.440,26.631)
C5: (70.640,136.456,26.625)
C4: (70.913,137.652,27.250)
P: (65.306,139.745,23.984)
C4': (67.990,141.206,26.472)
C2': (70.307,140.796,26.491)
O2': (70.739,141.920,27.223)
N1: (72.759,135.831,27.326)
N2: (74.101,137.219,28.551)
N3: (72.026,138.014,27.918)
N7: (69.376,136.473,26.058)
N9: (69.803,138.435,27.034)
O5': (66.580,139.982,24.919)
O3': (69.401,142.334,24.824)
OP2: (65.650,138.656,23.035)
C3': (69.174,141.120,25.528)
C1': (69.616,139.823,27.446)
C5': (66.616,141.074,25.861)
O6: (71.575,134.319,26.104)
O4': (68.226,140.125,27.407)
C8: (68.916,137.662,26.328)
C2: (72.932,137.046,27.928)
C6: (71.622,135.440,26.631)
C5: (70.640,136.456,26.625)
C4: (70.913,137.652,27.250)
P: (65.306,139.745,23.984)
C4': (67.990,141.206,26.472)
C2': (70.307,140.796,26.491)
O2': (70.739,141.920,27.223)
N1: (72.759,135.831,27.326)
N2: (74.101,137.219,28.551)
N3: (72.026,138.014,27.918)
N7: (69.376,136.473,26.058)
N9: (69.803,138.435,27.034)
O5': (66.580,139.982,24.919)
O3': (69.401,142.334,24.824)
OP1: (75.394,132.631,28.053)
OP2: (75.395,134.895,26.864)
C3': (77.252,135.829,31.511)
C1': (78.613,137.317,30.316)
C5': (77.684,134.020,29.753)
O6: (78.580,140.811,25.439)
O4': (79.019,136.028,29.921)
C8: (79.815,139.246,29.223)
C2: (76.715,137.966,26.427)
C6: (78.239,139.856,26.138)
C5: (78.756,139.449,27.390)
C4: (78.187,138.367,28.028)
P: (76.112,133.876,27.664)
C4': (78.267,135.045,30.684)
C2': (77.165,137.151,30.761)
O2': (76.761,138.215,31.596)
N1: (77.205,139.032,25.722)
N2: (75.713,137.298,25.850)
N3: (77.172,137.586,27.608)
N7: (79.786,139.983,28.149)
N9: (78.860,138.258,29.227)
O5': (76.615,134.591,28.990)
O3': (77.800,136.062,32.796)
OP2: (75.395,134.895,26.864)
C3': (77.252,135.829,31.511)
C1': (78.613,137.317,30.316)
C5': (77.684,134.020,29.753)
O6: (78.580,140.811,25.439)
O4': (79.019,136.028,29.921)
C8: (79.815,139.246,29.223)
C2: (76.715,137.966,26.427)
C6: (78.239,139.856,26.138)
C5: (78.756,139.449,27.390)
C4: (78.187,138.367,28.028)
P: (76.112,133.876,27.664)
C4': (78.267,135.045,30.684)
C2': (77.165,137.151,30.761)
O2': (76.761,138.215,31.596)
N1: (77.205,139.032,25.722)
N2: (75.713,137.298,25.850)
N3: (77.172,137.586,27.608)
N7: (79.786,139.983,28.149)
N9: (78.860,138.258,29.227)
O5': (76.615,134.591,28.990)
O3': (77.800,136.062,32.796)
Image (generated by PyMOL):