ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A916:A1314

Extra

PDB:
ATOM 1 O3' U A 915 -86.279 120.230 83.834 1.00 34.97 O
ATOM 2 P G A 916 -86.409 120.652 85.378 1.00 37.99 P
ATOM 3 OP1 G A 916 -87.040 119.522 86.121 1.00 46.23 O
ATOM 4 OP2 G A 916 -87.004 122.014 85.464 1.00 48.33 O
ATOM 5 O5' G A 916 -84.892 120.780 85.824 1.00 9.89 O
ATOM 6 C5' G A 916 -84.112 119.612 86.107 1.00 10.46 C
ATOM 7 C4' G A 916 -82.895 119.985 86.914 1.00 10.36 C
ATOM 8 O4' G A 916 -81.951 120.714 86.093 1.00 11.40 O
ATOM 9 C3' G A 916 -83.197 120.891 88.091 1.00 10.27 C
ATOM 10 O3' G A 916 -83.611 120.100 89.200 1.00 11.89 O
ATOM 11 C2' G A 916 -81.866 121.594 88.296 1.00 10.61 C
ATOM 12 O2' G A 916 -80.965 120.750 88.980 1.00 10.64 O
ATOM 13 C1' G A 916 -81.356 121.741 86.856 1.00 10.27 C
ATOM 14 N9 G A 916 -81.682 123.022 86.223 1.00 34.08 N
ATOM 15 C8 G A 916 -82.659 123.262 85.283 1.00 35.41 C
ATOM 16 N7 G A 916 -82.719 124.513 84.912 1.00 36.00 N
ATOM 17 C5 G A 916 -81.722 125.138 85.648 1.00 35.33 C
ATOM 18 C6 G A 916 -81.311 126.495 85.674 1.00 35.18 C
ATOM 19 O6 G A 916 -81.761 127.454 85.041 1.00 33.84 O
ATOM 20 N1 G A 916 -80.257 126.688 86.554 1.00 34.46 N
ATOM 21 C2 G A 916 -79.671 125.709 87.312 1.00 33.25 C
ATOM 22 N2 G A 916 -78.650 126.088 88.090 1.00 34.73 N
ATOM 23 N3 G A 916 -80.049 124.450 87.305 1.00 34.43 N
ATOM 24 C4 G A 916 -81.071 124.233 86.457 1.00 35.25 C
ATOM 25 P G A 917 -85.149 120.142 89.674 1.00 27.58 P
ATOM 26 OP1 G A 917 -85.272 119.284 90.881 1.00 34.94 O
ATOM 27 OP2 G A 917 -86.064 119.912 88.521 1.00 38.99 O
ATOM 28 O5' G A 917 -85.320 121.653 90.128 1.00 25.87 O
TER

ATOM 1 O3' G B1313 -81.505 129.116 89.020 1.00 22.74 O
ATOM 2 P G B1314 -80.251 130.058 88.656 1.00 26.47 P
ATOM 3 OP1 G B1314 -80.622 131.440 89.030 1.00 19.59 O
ATOM 4 OP2 G B1314 -79.783 129.783 87.269 1.00 17.91 O
ATOM 5 O5' G B1314 -79.109 129.563 89.661 1.00 28.61 O
ATOM 6 C5' G B1314 -78.695 130.354 90.814 1.00 29.17 C
ATOM 7 C4' G B1314 -77.683 129.586 91.647 1.00 29.87 C
ATOM 8 O4' G B1314 -78.332 128.541 92.419 1.00 30.83 O
ATOM 9 C3' G B1314 -76.631 128.876 90.820 1.00 28.77 C
ATOM 10 O3' G B1314 -75.588 129.798 90.538 1.00 27.34 O
ATOM 11 C2' G B1314 -76.223 127.674 91.682 1.00 30.96 C
ATOM 12 O2' G B1314 -75.185 127.922 92.603 1.00 32.57 O
ATOM 13 C1' G B1314 -77.504 127.388 92.470 1.00 32.07 C
ATOM 14 N9 G B1314 -78.288 126.218 92.069 1.00 38.15 N
ATOM 15 C8 G B1314 -79.406 126.201 91.275 1.00 38.54 C
ATOM 16 N7 G B1314 -79.927 125.013 91.146 1.00 39.64 N
ATOM 17 C5 G B1314 -79.097 124.194 91.889 1.00 40.40 C
ATOM 18 C6 G B1314 -79.164 122.803 92.129 1.00 41.56 C
ATOM 19 O6 G B1314 -80.001 121.993 91.733 1.00 42.30 O
ATOM 20 N1 G B1314 -78.120 122.372 92.928 1.00 43.40 N
ATOM 21 C2 G B1314 -77.134 123.177 93.436 1.00 43.53 C
ATOM 22 N2 G B1314 -76.198 122.570 94.189 1.00 43.95 N
ATOM 23 N3 G B1314 -77.065 124.481 93.224 1.00 41.29 N
ATOM 24 C4 G B1314 -78.071 124.918 92.449 1.00 39.33 C
ATOM 25 P A B1315 -74.702 129.615 89.213 1.00 23.59 P
ATOM 26 OP1 A B1315 -73.739 130.743 89.100 1.00 50.47 O
ATOM 27 OP2 A B1315 -75.636 129.329 88.086 1.00 49.67 O
ATOM 28 O5' A B1315 -73.855 128.303 89.539 1.00 29.40 O
TER

Atoms:
OP1: (-87.040,119.522,86.121)
OP2: (-87.004,122.014,85.464)
C3': (-83.197,120.891,88.091)
C1': (-81.356,121.741,86.856)
C5': (-84.112,119.612,86.107)
O6: (-81.761,127.454,85.041)
O4': (-81.951,120.714,86.093)
C8: (-82.659,123.262,85.283)
C2: (-79.671,125.709,87.312)
C6: (-81.311,126.495,85.674)
C5: (-81.722,125.138,85.648)
C4: (-81.071,124.233,86.457)
P: (-86.409,120.652,85.378)
C4': (-82.895,119.985,86.914)
C2': (-81.866,121.594,88.296)
O2': (-80.965,120.750,88.980)
N1: (-80.257,126.688,86.554)
N2: (-78.650,126.088,88.090)
N3: (-80.049,124.450,87.305)
N7: (-82.719,124.513,84.912)
N9: (-81.682,123.022,86.223)
O5': (-84.892,120.780,85.824)
O3': (-83.611,120.100,89.200)
OP1: (-80.622,131.440,89.030)
OP2: (-79.783,129.783,87.269)
C3': (-76.631,128.876,90.820)
C1': (-77.504,127.388,92.470)
C5': (-78.695,130.354,90.814)
O6: (-80.001,121.993,91.733)
O4': (-78.332,128.541,92.419)
C8: (-79.406,126.201,91.275)
C2: (-77.134,123.177,93.436)
C6: (-79.164,122.803,92.129)
C5: (-79.097,124.194,91.889)
C4: (-78.071,124.918,92.449)
P: (-80.251,130.058,88.656)
C4': (-77.683,129.586,91.647)
C2': (-76.223,127.674,91.682)
O2': (-75.185,127.922,92.603)
N1: (-78.120,122.372,92.928)
N2: (-76.198,122.570,94.189)
N3: (-77.065,124.481,93.224)
N7: (-79.927,125.013,91.146)
N9: (-78.288,126.218,92.069)
O5': (-79.109,129.563,89.661)
O3': (-75.588,129.798,90.538)
Image (generated by PyMOL):
PyMOL image
show in jmol