Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CPW:0552:0580
Extra
PDB:
ATOM 1 O3' C A 551 -11.084 95.235 94.314 1.00 56.68 O
ATOM 2 P G A 552 -10.830 94.092 95.415 1.00 58.05 P
ATOM 3 OP1 G A 552 -10.598 92.812 94.702 1.00 55.99 O
ATOM 4 OP2 G A 552 -11.906 94.186 96.435 1.00 58.84 O
ATOM 5 O5' G A 552 -9.474 94.522 96.129 1.00 58.72 O
ATOM 6 C5' G A 552 -8.264 94.676 95.378 1.00 57.80 C
ATOM 7 C4' G A 552 -7.215 95.372 96.208 1.00 57.96 C
ATOM 8 O4' G A 552 -7.676 96.691 96.596 1.00 60.05 O
ATOM 9 C3' G A 552 -6.831 94.717 97.522 1.00 56.94 C
ATOM 10 O3' G A 552 -5.889 93.689 97.285 1.00 56.63 O
ATOM 11 C2' G A 552 -6.227 95.877 98.305 1.00 58.83 C
ATOM 12 O2' G A 552 -4.876 96.127 97.987 1.00 61.22 O
ATOM 13 C1' G A 552 -7.062 97.061 97.818 1.00 61.37 C
ATOM 14 N9 G A 552 -8.080 97.449 98.789 1.00 64.31 N
ATOM 15 C8 G A 552 -9.263 96.806 99.073 1.00 64.27 C
ATOM 16 N7 G A 552 -9.925 97.367 100.048 1.00 65.50 N
ATOM 17 C5 G A 552 -9.142 98.452 100.419 1.00 67.07 C
ATOM 18 C6 G A 552 -9.339 99.428 101.433 1.00 68.97 C
ATOM 19 O6 G A 552 -10.283 99.536 102.228 1.00 68.21 O
ATOM 20 N1 G A 552 -8.291 100.344 101.473 1.00 69.78 N
ATOM 21 C2 G A 552 -7.200 100.329 100.647 1.00 70.64 C
ATOM 22 N2 G A 552 -6.296 101.299 100.848 1.00 72.85 N
ATOM 23 N3 G A 552 -7.006 99.429 99.695 1.00 69.99 N
ATOM 24 C4 G A 552 -8.009 98.525 99.642 1.00 66.69 C
ATOM 25 P A A 553 -5.375 92.765 98.496 1.00 57.05 P
ATOM 26 OP1 A A 553 -5.966 91.414 98.307 1.00 54.28 O
ATOM 27 OP2 A A 553 -5.563 93.480 99.781 1.00 51.60 O
ATOM 28 O5' A A 553 -3.811 92.634 98.205 1.00 57.09 O
TER
ATOM 1 O3' A B 579 -6.393 102.666 106.345 1.00 61.71 O
ATOM 2 P G B 580 -6.384 103.014 104.776 1.00 61.97 P
ATOM 3 OP1 G B 580 -6.229 104.487 104.646 1.00 60.74 O
ATOM 4 OP2 G B 580 -7.547 102.340 104.139 1.00 62.09 O
ATOM 5 O5' G B 580 -5.090 102.267 104.220 1.00 60.07 O
ATOM 6 C5' G B 580 -3.763 102.577 104.700 1.00 55.78 C
ATOM 7 C4' G B 580 -2.766 101.628 104.081 1.00 55.35 C
ATOM 8 O4' G B 580 -3.000 100.288 104.586 1.00 54.93 O
ATOM 9 C3' G B 580 -2.876 101.506 102.565 1.00 54.68 C
ATOM 10 O3' G B 580 -2.057 102.460 101.910 1.00 55.30 O
ATOM 11 C2' G B 580 -2.362 100.097 102.289 1.00 53.98 C
ATOM 12 O2' G B 580 -0.960 100.032 102.137 1.00 55.61 O
ATOM 13 C1' G B 580 -2.807 99.340 103.544 1.00 53.77 C
ATOM 14 N9 G B 580 -4.075 98.661 103.316 1.00 52.66 N
ATOM 15 C8 G B 580 -5.330 99.141 103.614 1.00 54.73 C
ATOM 16 N7 G B 580 -6.286 98.341 103.239 1.00 54.42 N
ATOM 17 C5 G B 580 -5.625 97.262 102.673 1.00 52.99 C
ATOM 18 C6 G B 580 -6.139 96.099 102.092 1.00 52.46 C
ATOM 19 O6 G B 580 -7.318 95.781 101.951 1.00 55.85 O
ATOM 20 N1 G B 580 -5.128 95.258 101.644 1.00 50.87 N
ATOM 21 C2 G B 580 -3.785 95.517 101.747 1.00 51.35 C
ATOM 22 N2 G B 580 -2.958 94.579 101.265 1.00 51.65 N
ATOM 23 N3 G B 580 -3.288 96.615 102.286 1.00 51.87 N
ATOM 24 C4 G B 580 -4.259 97.439 102.726 1.00 52.28 C
ATOM 25 P A B 581 -2.644 103.906 101.534 1.00 58.66 P
ATOM 26 OP1 A B 581 -2.454 104.789 102.717 1.00 56.93 O
ATOM 27 OP2 A B 581 -3.997 103.771 100.940 1.00 58.01 O
ATOM 28 O5' A B 581 -1.650 104.393 100.388 1.00 58.66 O
TER
ATOM 2 P G A 552 -10.830 94.092 95.415 1.00 58.05 P
ATOM 3 OP1 G A 552 -10.598 92.812 94.702 1.00 55.99 O
ATOM 4 OP2 G A 552 -11.906 94.186 96.435 1.00 58.84 O
ATOM 5 O5' G A 552 -9.474 94.522 96.129 1.00 58.72 O
ATOM 6 C5' G A 552 -8.264 94.676 95.378 1.00 57.80 C
ATOM 7 C4' G A 552 -7.215 95.372 96.208 1.00 57.96 C
ATOM 8 O4' G A 552 -7.676 96.691 96.596 1.00 60.05 O
ATOM 9 C3' G A 552 -6.831 94.717 97.522 1.00 56.94 C
ATOM 10 O3' G A 552 -5.889 93.689 97.285 1.00 56.63 O
ATOM 11 C2' G A 552 -6.227 95.877 98.305 1.00 58.83 C
ATOM 12 O2' G A 552 -4.876 96.127 97.987 1.00 61.22 O
ATOM 13 C1' G A 552 -7.062 97.061 97.818 1.00 61.37 C
ATOM 14 N9 G A 552 -8.080 97.449 98.789 1.00 64.31 N
ATOM 15 C8 G A 552 -9.263 96.806 99.073 1.00 64.27 C
ATOM 16 N7 G A 552 -9.925 97.367 100.048 1.00 65.50 N
ATOM 17 C5 G A 552 -9.142 98.452 100.419 1.00 67.07 C
ATOM 18 C6 G A 552 -9.339 99.428 101.433 1.00 68.97 C
ATOM 19 O6 G A 552 -10.283 99.536 102.228 1.00 68.21 O
ATOM 20 N1 G A 552 -8.291 100.344 101.473 1.00 69.78 N
ATOM 21 C2 G A 552 -7.200 100.329 100.647 1.00 70.64 C
ATOM 22 N2 G A 552 -6.296 101.299 100.848 1.00 72.85 N
ATOM 23 N3 G A 552 -7.006 99.429 99.695 1.00 69.99 N
ATOM 24 C4 G A 552 -8.009 98.525 99.642 1.00 66.69 C
ATOM 25 P A A 553 -5.375 92.765 98.496 1.00 57.05 P
ATOM 26 OP1 A A 553 -5.966 91.414 98.307 1.00 54.28 O
ATOM 27 OP2 A A 553 -5.563 93.480 99.781 1.00 51.60 O
ATOM 28 O5' A A 553 -3.811 92.634 98.205 1.00 57.09 O
TER
ATOM 1 O3' A B 579 -6.393 102.666 106.345 1.00 61.71 O
ATOM 2 P G B 580 -6.384 103.014 104.776 1.00 61.97 P
ATOM 3 OP1 G B 580 -6.229 104.487 104.646 1.00 60.74 O
ATOM 4 OP2 G B 580 -7.547 102.340 104.139 1.00 62.09 O
ATOM 5 O5' G B 580 -5.090 102.267 104.220 1.00 60.07 O
ATOM 6 C5' G B 580 -3.763 102.577 104.700 1.00 55.78 C
ATOM 7 C4' G B 580 -2.766 101.628 104.081 1.00 55.35 C
ATOM 8 O4' G B 580 -3.000 100.288 104.586 1.00 54.93 O
ATOM 9 C3' G B 580 -2.876 101.506 102.565 1.00 54.68 C
ATOM 10 O3' G B 580 -2.057 102.460 101.910 1.00 55.30 O
ATOM 11 C2' G B 580 -2.362 100.097 102.289 1.00 53.98 C
ATOM 12 O2' G B 580 -0.960 100.032 102.137 1.00 55.61 O
ATOM 13 C1' G B 580 -2.807 99.340 103.544 1.00 53.77 C
ATOM 14 N9 G B 580 -4.075 98.661 103.316 1.00 52.66 N
ATOM 15 C8 G B 580 -5.330 99.141 103.614 1.00 54.73 C
ATOM 16 N7 G B 580 -6.286 98.341 103.239 1.00 54.42 N
ATOM 17 C5 G B 580 -5.625 97.262 102.673 1.00 52.99 C
ATOM 18 C6 G B 580 -6.139 96.099 102.092 1.00 52.46 C
ATOM 19 O6 G B 580 -7.318 95.781 101.951 1.00 55.85 O
ATOM 20 N1 G B 580 -5.128 95.258 101.644 1.00 50.87 N
ATOM 21 C2 G B 580 -3.785 95.517 101.747 1.00 51.35 C
ATOM 22 N2 G B 580 -2.958 94.579 101.265 1.00 51.65 N
ATOM 23 N3 G B 580 -3.288 96.615 102.286 1.00 51.87 N
ATOM 24 C4 G B 580 -4.259 97.439 102.726 1.00 52.28 C
ATOM 25 P A B 581 -2.644 103.906 101.534 1.00 58.66 P
ATOM 26 OP1 A B 581 -2.454 104.789 102.717 1.00 56.93 O
ATOM 27 OP2 A B 581 -3.997 103.771 100.940 1.00 58.01 O
ATOM 28 O5' A B 581 -1.650 104.393 100.388 1.00 58.66 O
TER
Atoms:
OP1: (-10.598,92.812,94.702)
OP2: (-11.906,94.186,96.435)
C3': (-6.831,94.717,97.522)
C1': (-7.062,97.061,97.818)
C5': (-8.264,94.676,95.378)
O6: (-10.283,99.536,102.228)
O4': (-7.676,96.691,96.596)
C8: (-9.263,96.806,99.073)
C2: (-7.200,100.329,100.647)
C6: (-9.339,99.428,101.433)
C5: (-9.142,98.452,100.419)
C4: (-8.009,98.525,99.642)
P: (-10.830,94.092,95.415)
C4': (-7.215,95.372,96.208)
C2': (-6.227,95.877,98.305)
O2': (-4.876,96.127,97.987)
N1: (-8.291,100.344,101.473)
N2: (-6.296,101.299,100.848)
N3: (-7.006,99.429,99.695)
N7: (-9.925,97.367,100.048)
N9: (-8.080,97.449,98.789)
O5': (-9.474,94.522,96.129)
O3': (-5.889,93.689,97.285)
OP2: (-11.906,94.186,96.435)
C3': (-6.831,94.717,97.522)
C1': (-7.062,97.061,97.818)
C5': (-8.264,94.676,95.378)
O6: (-10.283,99.536,102.228)
O4': (-7.676,96.691,96.596)
C8: (-9.263,96.806,99.073)
C2: (-7.200,100.329,100.647)
C6: (-9.339,99.428,101.433)
C5: (-9.142,98.452,100.419)
C4: (-8.009,98.525,99.642)
P: (-10.830,94.092,95.415)
C4': (-7.215,95.372,96.208)
C2': (-6.227,95.877,98.305)
O2': (-4.876,96.127,97.987)
N1: (-8.291,100.344,101.473)
N2: (-6.296,101.299,100.848)
N3: (-7.006,99.429,99.695)
N7: (-9.925,97.367,100.048)
N9: (-8.080,97.449,98.789)
O5': (-9.474,94.522,96.129)
O3': (-5.889,93.689,97.285)
OP1: (-6.229,104.487,104.646)
OP2: (-7.547,102.340,104.139)
C3': (-2.876,101.506,102.565)
C1': (-2.807,99.340,103.544)
C5': (-3.763,102.577,104.700)
O6: (-7.318,95.781,101.951)
O4': (-3.000,100.288,104.586)
C8: (-5.330,99.141,103.614)
C2: (-3.785,95.517,101.747)
C6: (-6.139,96.099,102.092)
C5: (-5.625,97.262,102.673)
C4: (-4.259,97.439,102.726)
P: (-6.384,103.014,104.776)
C4': (-2.766,101.628,104.081)
C2': (-2.362,100.097,102.289)
O2': (-0.960,100.032,102.137)
N1: (-5.128,95.258,101.644)
N2: (-2.958,94.579,101.265)
N3: (-3.288,96.615,102.286)
N7: (-6.286,98.341,103.239)
N9: (-4.075,98.661,103.316)
O5': (-5.090,102.267,104.220)
O3': (-2.057,102.460,101.910)
OP2: (-7.547,102.340,104.139)
C3': (-2.876,101.506,102.565)
C1': (-2.807,99.340,103.544)
C5': (-3.763,102.577,104.700)
O6: (-7.318,95.781,101.951)
O4': (-3.000,100.288,104.586)
C8: (-5.330,99.141,103.614)
C2: (-3.785,95.517,101.747)
C6: (-6.139,96.099,102.092)
C5: (-5.625,97.262,102.673)
C4: (-4.259,97.439,102.726)
P: (-6.384,103.014,104.776)
C4': (-2.766,101.628,104.081)
C2': (-2.362,100.097,102.289)
O2': (-0.960,100.032,102.137)
N1: (-5.128,95.258,101.644)
N2: (-2.958,94.579,101.265)
N3: (-3.288,96.615,102.286)
N7: (-6.286,98.341,103.239)
N9: (-4.075,98.661,103.316)
O5': (-5.090,102.267,104.220)
O3': (-2.057,102.460,101.910)
Image (generated by PyMOL):