Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A116:A109
Extra
PDB:
ATOM 1 O3' G A 115 -31.545 -40.452 45.410 1.00 40.99 O
ATOM 2 P G A 116 -33.115 -40.688 45.252 1.00 32.78 P
ATOM 3 OP1 G A 116 -33.597 -39.539 44.459 1.00 43.16 O
ATOM 4 OP2 G A 116 -33.682 -40.973 46.591 1.00 46.41 O
ATOM 5 O5' G A 116 -33.257 -42.001 44.380 1.00 29.26 O
ATOM 6 C5' G A 116 -32.574 -42.019 43.160 1.00 42.86 C
ATOM 7 C4' G A 116 -32.465 -43.456 42.708 1.00 41.57 C
ATOM 8 O4' G A 116 -31.552 -44.194 43.559 1.00 38.46 O
ATOM 9 C3' G A 116 -33.766 -44.217 42.826 1.00 47.71 C
ATOM 10 O3' G A 116 -34.598 -43.854 41.717 1.00 55.90 O
ATOM 11 C2' G A 116 -33.225 -45.654 42.809 1.00 40.49 C
ATOM 12 O2' G A 116 -32.809 -46.124 41.535 1.00 28.97 O
ATOM 13 C1' G A 116 -32.020 -45.507 43.735 1.00 35.69 C
ATOM 14 N9 G A 116 -32.313 -45.665 45.153 1.00 41.10 N
ATOM 15 C8 G A 116 -32.487 -44.679 46.094 1.00 43.96 C
ATOM 16 N7 G A 116 -32.738 -45.138 47.288 1.00 42.64 N
ATOM 17 C5 G A 116 -32.726 -46.515 47.124 1.00 44.73 C
ATOM 18 C6 G A 116 -32.938 -47.539 48.074 1.00 54.55 C
ATOM 19 O6 G A 116 -33.182 -47.399 49.286 1.00 72.01 O
ATOM 20 N1 G A 116 -32.843 -48.808 47.481 1.00 40.89 N
ATOM 21 C2 G A 116 -32.579 -49.039 46.142 1.00 36.77 C
ATOM 22 N2 G A 116 -32.522 -50.315 45.740 1.00 41.46 N
ATOM 23 N3 G A 116 -32.379 -48.085 45.248 1.00 33.69 N
ATOM 24 C4 G A 116 -32.467 -46.856 45.814 1.00 40.04 C
ATOM 25 P G A 117 -36.125 -44.328 41.569 1.00 49.98 P
ATOM 26 OP1 G A 117 -36.604 -43.768 40.273 1.00 46.15 O
ATOM 27 OP2 G A 117 -36.840 -44.087 42.857 1.00 41.69 O
ATOM 28 O5' G A 117 -35.933 -45.909 41.392 1.00 43.58 O
TER
ATOM 1 O3' C B 108 -33.124 -53.052 48.887 1.00 37.27 O
ATOM 2 P G B 109 -33.731 -51.977 49.910 1.00 47.53 P
ATOM 3 OP1 G B 109 -34.293 -50.884 49.088 1.00 39.91 O
ATOM 4 OP2 G B 109 -32.742 -51.646 50.965 1.00 42.02 O
ATOM 5 O5' G B 109 -34.917 -52.812 50.584 1.00 52.06 O
ATOM 6 C5' G B 109 -36.077 -53.044 49.808 1.00 56.74 C
ATOM 7 C4' G B 109 -37.088 -53.952 50.488 1.00 50.29 C
ATOM 8 O4' G B 109 -36.531 -55.276 50.698 1.00 49.30 O
ATOM 9 C3' G B 109 -37.560 -53.470 51.848 1.00 45.35 C
ATOM 10 O3' G B 109 -38.649 -52.573 51.675 1.00 43.93 O
ATOM 11 C2' G B 109 -38.036 -54.776 52.458 1.00 46.27 C
ATOM 12 O2' G B 109 -39.353 -55.070 52.030 1.00 48.23 O
ATOM 13 C1' G B 109 -37.022 -55.788 51.915 1.00 47.96 C
ATOM 14 N9 G B 109 -35.848 -55.937 52.754 1.00 46.82 N
ATOM 15 C8 G B 109 -34.728 -55.162 52.693 1.00 48.03 C
ATOM 16 N7 G B 109 -33.826 -55.509 53.564 1.00 56.99 N
ATOM 17 C5 G B 109 -34.378 -56.584 54.239 1.00 51.82 C
ATOM 18 C6 G B 109 -33.854 -57.369 55.290 1.00 51.74 C
ATOM 19 O6 G B 109 -32.762 -57.278 55.859 1.00 63.98 O
ATOM 20 N1 G B 109 -34.740 -58.355 55.682 1.00 45.03 N
ATOM 21 C2 G B 109 -35.970 -58.553 55.125 1.00 48.76 C
ATOM 22 N2 G B 109 -36.676 -59.555 55.644 1.00 52.92 N
ATOM 23 N3 G B 109 -36.479 -57.835 54.140 1.00 56.10 N
ATOM 24 C4 G B 109 -35.627 -56.863 53.747 1.00 53.57 C
ATOM 25 P A B 110 -38.470 -51.031 52.087 1.00 31.99 P
ATOM 26 OP1 A B 110 -38.955 -50.170 50.963 1.00 34.23 O
ATOM 27 OP2 A B 110 -37.078 -50.900 52.581 1.00 39.73 O
ATOM 28 O5' A B 110 -39.457 -50.859 53.332 1.00 34.31 O
TER
ATOM 2 P G A 116 -33.115 -40.688 45.252 1.00 32.78 P
ATOM 3 OP1 G A 116 -33.597 -39.539 44.459 1.00 43.16 O
ATOM 4 OP2 G A 116 -33.682 -40.973 46.591 1.00 46.41 O
ATOM 5 O5' G A 116 -33.257 -42.001 44.380 1.00 29.26 O
ATOM 6 C5' G A 116 -32.574 -42.019 43.160 1.00 42.86 C
ATOM 7 C4' G A 116 -32.465 -43.456 42.708 1.00 41.57 C
ATOM 8 O4' G A 116 -31.552 -44.194 43.559 1.00 38.46 O
ATOM 9 C3' G A 116 -33.766 -44.217 42.826 1.00 47.71 C
ATOM 10 O3' G A 116 -34.598 -43.854 41.717 1.00 55.90 O
ATOM 11 C2' G A 116 -33.225 -45.654 42.809 1.00 40.49 C
ATOM 12 O2' G A 116 -32.809 -46.124 41.535 1.00 28.97 O
ATOM 13 C1' G A 116 -32.020 -45.507 43.735 1.00 35.69 C
ATOM 14 N9 G A 116 -32.313 -45.665 45.153 1.00 41.10 N
ATOM 15 C8 G A 116 -32.487 -44.679 46.094 1.00 43.96 C
ATOM 16 N7 G A 116 -32.738 -45.138 47.288 1.00 42.64 N
ATOM 17 C5 G A 116 -32.726 -46.515 47.124 1.00 44.73 C
ATOM 18 C6 G A 116 -32.938 -47.539 48.074 1.00 54.55 C
ATOM 19 O6 G A 116 -33.182 -47.399 49.286 1.00 72.01 O
ATOM 20 N1 G A 116 -32.843 -48.808 47.481 1.00 40.89 N
ATOM 21 C2 G A 116 -32.579 -49.039 46.142 1.00 36.77 C
ATOM 22 N2 G A 116 -32.522 -50.315 45.740 1.00 41.46 N
ATOM 23 N3 G A 116 -32.379 -48.085 45.248 1.00 33.69 N
ATOM 24 C4 G A 116 -32.467 -46.856 45.814 1.00 40.04 C
ATOM 25 P G A 117 -36.125 -44.328 41.569 1.00 49.98 P
ATOM 26 OP1 G A 117 -36.604 -43.768 40.273 1.00 46.15 O
ATOM 27 OP2 G A 117 -36.840 -44.087 42.857 1.00 41.69 O
ATOM 28 O5' G A 117 -35.933 -45.909 41.392 1.00 43.58 O
TER
ATOM 1 O3' C B 108 -33.124 -53.052 48.887 1.00 37.27 O
ATOM 2 P G B 109 -33.731 -51.977 49.910 1.00 47.53 P
ATOM 3 OP1 G B 109 -34.293 -50.884 49.088 1.00 39.91 O
ATOM 4 OP2 G B 109 -32.742 -51.646 50.965 1.00 42.02 O
ATOM 5 O5' G B 109 -34.917 -52.812 50.584 1.00 52.06 O
ATOM 6 C5' G B 109 -36.077 -53.044 49.808 1.00 56.74 C
ATOM 7 C4' G B 109 -37.088 -53.952 50.488 1.00 50.29 C
ATOM 8 O4' G B 109 -36.531 -55.276 50.698 1.00 49.30 O
ATOM 9 C3' G B 109 -37.560 -53.470 51.848 1.00 45.35 C
ATOM 10 O3' G B 109 -38.649 -52.573 51.675 1.00 43.93 O
ATOM 11 C2' G B 109 -38.036 -54.776 52.458 1.00 46.27 C
ATOM 12 O2' G B 109 -39.353 -55.070 52.030 1.00 48.23 O
ATOM 13 C1' G B 109 -37.022 -55.788 51.915 1.00 47.96 C
ATOM 14 N9 G B 109 -35.848 -55.937 52.754 1.00 46.82 N
ATOM 15 C8 G B 109 -34.728 -55.162 52.693 1.00 48.03 C
ATOM 16 N7 G B 109 -33.826 -55.509 53.564 1.00 56.99 N
ATOM 17 C5 G B 109 -34.378 -56.584 54.239 1.00 51.82 C
ATOM 18 C6 G B 109 -33.854 -57.369 55.290 1.00 51.74 C
ATOM 19 O6 G B 109 -32.762 -57.278 55.859 1.00 63.98 O
ATOM 20 N1 G B 109 -34.740 -58.355 55.682 1.00 45.03 N
ATOM 21 C2 G B 109 -35.970 -58.553 55.125 1.00 48.76 C
ATOM 22 N2 G B 109 -36.676 -59.555 55.644 1.00 52.92 N
ATOM 23 N3 G B 109 -36.479 -57.835 54.140 1.00 56.10 N
ATOM 24 C4 G B 109 -35.627 -56.863 53.747 1.00 53.57 C
ATOM 25 P A B 110 -38.470 -51.031 52.087 1.00 31.99 P
ATOM 26 OP1 A B 110 -38.955 -50.170 50.963 1.00 34.23 O
ATOM 27 OP2 A B 110 -37.078 -50.900 52.581 1.00 39.73 O
ATOM 28 O5' A B 110 -39.457 -50.859 53.332 1.00 34.31 O
TER
Atoms:
OP1: (-33.597,-39.539,44.459)
OP2: (-33.682,-40.973,46.591)
C3': (-33.766,-44.217,42.826)
C1': (-32.020,-45.507,43.735)
C5': (-32.574,-42.019,43.160)
O6: (-33.182,-47.399,49.286)
O4': (-31.552,-44.194,43.559)
C8: (-32.487,-44.679,46.094)
C2: (-32.579,-49.039,46.142)
C6: (-32.938,-47.539,48.074)
C5: (-32.726,-46.515,47.124)
C4: (-32.467,-46.856,45.814)
P: (-33.115,-40.688,45.252)
C4': (-32.465,-43.456,42.708)
C2': (-33.225,-45.654,42.809)
O2': (-32.809,-46.124,41.535)
N1: (-32.843,-48.808,47.481)
N2: (-32.522,-50.315,45.740)
N3: (-32.379,-48.085,45.248)
N7: (-32.738,-45.138,47.288)
N9: (-32.313,-45.665,45.153)
O5': (-33.257,-42.001,44.380)
O3': (-34.598,-43.854,41.717)
OP2: (-33.682,-40.973,46.591)
C3': (-33.766,-44.217,42.826)
C1': (-32.020,-45.507,43.735)
C5': (-32.574,-42.019,43.160)
O6: (-33.182,-47.399,49.286)
O4': (-31.552,-44.194,43.559)
C8: (-32.487,-44.679,46.094)
C2: (-32.579,-49.039,46.142)
C6: (-32.938,-47.539,48.074)
C5: (-32.726,-46.515,47.124)
C4: (-32.467,-46.856,45.814)
P: (-33.115,-40.688,45.252)
C4': (-32.465,-43.456,42.708)
C2': (-33.225,-45.654,42.809)
O2': (-32.809,-46.124,41.535)
N1: (-32.843,-48.808,47.481)
N2: (-32.522,-50.315,45.740)
N3: (-32.379,-48.085,45.248)
N7: (-32.738,-45.138,47.288)
N9: (-32.313,-45.665,45.153)
O5': (-33.257,-42.001,44.380)
O3': (-34.598,-43.854,41.717)
OP1: (-34.293,-50.884,49.088)
OP2: (-32.742,-51.646,50.965)
C3': (-37.560,-53.470,51.848)
C1': (-37.022,-55.788,51.915)
C5': (-36.077,-53.044,49.808)
O6: (-32.762,-57.278,55.859)
O4': (-36.531,-55.276,50.698)
C8: (-34.728,-55.162,52.693)
C2: (-35.970,-58.553,55.125)
C6: (-33.854,-57.369,55.290)
C5: (-34.378,-56.584,54.239)
C4: (-35.627,-56.863,53.747)
P: (-33.731,-51.977,49.910)
C4': (-37.088,-53.952,50.488)
C2': (-38.036,-54.776,52.458)
O2': (-39.353,-55.070,52.030)
N1: (-34.740,-58.355,55.682)
N2: (-36.676,-59.555,55.644)
N3: (-36.479,-57.835,54.140)
N7: (-33.826,-55.509,53.564)
N9: (-35.848,-55.937,52.754)
O5': (-34.917,-52.812,50.584)
O3': (-38.649,-52.573,51.675)
OP2: (-32.742,-51.646,50.965)
C3': (-37.560,-53.470,51.848)
C1': (-37.022,-55.788,51.915)
C5': (-36.077,-53.044,49.808)
O6: (-32.762,-57.278,55.859)
O4': (-36.531,-55.276,50.698)
C8: (-34.728,-55.162,52.693)
C2: (-35.970,-58.553,55.125)
C6: (-33.854,-57.369,55.290)
C5: (-34.378,-56.584,54.239)
C4: (-35.627,-56.863,53.747)
P: (-33.731,-51.977,49.910)
C4': (-37.088,-53.952,50.488)
C2': (-38.036,-54.776,52.458)
O2': (-39.353,-55.070,52.030)
N1: (-34.740,-58.355,55.682)
N2: (-36.676,-59.555,55.644)
N3: (-36.479,-57.835,54.140)
N7: (-33.826,-55.509,53.564)
N9: (-35.848,-55.937,52.754)
O5': (-34.917,-52.812,50.584)
O3': (-38.649,-52.573,51.675)
Image (generated by PyMOL):