Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A116:A109
Extra
PDB:
ATOM 1 O3' G A 115 31.117 -39.249 -47.778 1.00 48.29 O
ATOM 2 P G A 116 32.618 -39.723 -47.447 1.00 51.26 P
ATOM 3 OP1 G A 116 33.203 -38.721 -46.506 1.00 43.66 O
ATOM 4 OP2 G A 116 33.279 -39.972 -48.767 1.00 38.53 O
ATOM 5 O5' G A 116 32.433 -41.142 -46.728 1.00 39.66 O
ATOM 6 C5' G A 116 31.754 -41.269 -45.472 1.00 38.81 C
ATOM 7 C4' G A 116 31.674 -42.728 -45.056 1.00 39.98 C
ATOM 8 O4' G A 116 30.822 -43.468 -45.957 1.00 39.09 O
ATOM 9 C3' G A 116 32.994 -43.465 -45.075 1.00 36.80 C
ATOM 10 O3' G A 116 33.630 -43.248 -43.829 1.00 39.38 O
ATOM 11 C2' G A 116 32.574 -44.912 -45.297 1.00 36.41 C
ATOM 12 O2' G A 116 32.110 -45.537 -44.122 1.00 35.93 O
ATOM 13 C1' G A 116 31.368 -44.743 -46.212 1.00 34.06 C
ATOM 14 N9 G A 116 31.721 -44.792 -47.623 1.00 32.42 N
ATOM 15 C8 G A 116 31.937 -43.723 -48.459 1.00 32.36 C
ATOM 16 N7 G A 116 32.261 -44.078 -49.667 1.00 29.10 N
ATOM 17 C5 G A 116 32.258 -45.454 -49.631 1.00 31.32 C
ATOM 18 C6 G A 116 32.566 -46.393 -50.642 1.00 43.34 C
ATOM 19 O6 G A 116 32.898 -46.176 -51.844 1.00 48.57 O
ATOM 20 N1 G A 116 32.466 -47.700 -50.160 1.00 38.28 N
ATOM 21 C2 G A 116 32.108 -48.047 -48.869 1.00 37.16 C
ATOM 22 N2 G A 116 32.090 -49.361 -48.592 1.00 42.25 N
ATOM 23 N3 G A 116 31.803 -47.174 -47.927 1.00 31.46 N
ATOM 24 C4 G A 116 31.911 -45.910 -48.372 1.00 30.27 C
ATOM 25 P G A 117 35.221 -43.351 -43.722 1.00 55.08 P
ATOM 26 OP1 G A 117 35.620 -42.777 -42.403 1.00 48.92 O
ATOM 27 OP2 G A 117 35.793 -42.786 -44.968 1.00 53.21 O
ATOM 28 O5' G A 117 35.484 -44.924 -43.760 1.00 48.60 O
TER
ATOM 1 O3' C B 108 32.120 -51.628 -51.575 1.00 45.52 O
ATOM 2 P G B 109 33.148 -50.867 -52.532 1.00 52.17 P
ATOM 3 OP1 G B 109 33.711 -49.738 -51.740 1.00 55.43 O
ATOM 4 OP2 G B 109 32.437 -50.593 -53.807 1.00 51.97 O
ATOM 5 O5' G B 109 34.291 -51.941 -52.854 1.00 48.11 O
ATOM 6 C5' G B 109 35.627 -51.798 -52.366 1.00 46.07 C
ATOM 7 C4' G B 109 36.525 -52.832 -53.008 1.00 46.75 C
ATOM 8 O4' G B 109 35.746 -54.043 -53.172 1.00 54.78 O
ATOM 9 C3' G B 109 37.041 -52.520 -54.406 1.00 47.56 C
ATOM 10 O3' G B 109 38.262 -51.787 -54.344 1.00 50.36 O
ATOM 11 C2' G B 109 37.266 -53.914 -54.993 1.00 49.13 C
ATOM 12 O2' G B 109 38.458 -54.535 -54.565 1.00 43.62 O
ATOM 13 C1' G B 109 36.128 -54.708 -54.365 1.00 55.69 C
ATOM 14 N9 G B 109 34.963 -54.833 -55.242 1.00 57.81 N
ATOM 15 C8 G B 109 33.923 -53.943 -55.356 1.00 56.34 C
ATOM 16 N7 G B 109 33.014 -54.321 -56.214 1.00 56.59 N
ATOM 17 C5 G B 109 33.473 -55.540 -56.698 1.00 59.01 C
ATOM 18 C6 G B 109 32.894 -56.433 -57.650 1.00 58.80 C
ATOM 19 O6 G B 109 31.813 -56.327 -58.254 1.00 58.88 O
ATOM 20 N1 G B 109 33.703 -57.549 -57.865 1.00 57.24 N
ATOM 21 C2 G B 109 34.902 -57.790 -57.238 1.00 59.42 C
ATOM 22 N2 G B 109 35.533 -58.931 -57.583 1.00 53.95 N
ATOM 23 N3 G B 109 35.444 -56.974 -56.338 1.00 58.92 N
ATOM 24 C4 G B 109 34.681 -55.873 -56.119 1.00 58.20 C
ATOM 25 P A B 110 38.249 -50.179 -54.465 1.00 58.26 P
ATOM 26 OP1 A B 110 39.088 -49.616 -53.380 1.00 55.61 O
ATOM 27 OP2 A B 110 36.832 -49.736 -54.598 1.00 51.00 O
ATOM 28 O5' A B 110 39.079 -49.855 -55.785 1.00 48.11 O
TER
ATOM 2 P G A 116 32.618 -39.723 -47.447 1.00 51.26 P
ATOM 3 OP1 G A 116 33.203 -38.721 -46.506 1.00 43.66 O
ATOM 4 OP2 G A 116 33.279 -39.972 -48.767 1.00 38.53 O
ATOM 5 O5' G A 116 32.433 -41.142 -46.728 1.00 39.66 O
ATOM 6 C5' G A 116 31.754 -41.269 -45.472 1.00 38.81 C
ATOM 7 C4' G A 116 31.674 -42.728 -45.056 1.00 39.98 C
ATOM 8 O4' G A 116 30.822 -43.468 -45.957 1.00 39.09 O
ATOM 9 C3' G A 116 32.994 -43.465 -45.075 1.00 36.80 C
ATOM 10 O3' G A 116 33.630 -43.248 -43.829 1.00 39.38 O
ATOM 11 C2' G A 116 32.574 -44.912 -45.297 1.00 36.41 C
ATOM 12 O2' G A 116 32.110 -45.537 -44.122 1.00 35.93 O
ATOM 13 C1' G A 116 31.368 -44.743 -46.212 1.00 34.06 C
ATOM 14 N9 G A 116 31.721 -44.792 -47.623 1.00 32.42 N
ATOM 15 C8 G A 116 31.937 -43.723 -48.459 1.00 32.36 C
ATOM 16 N7 G A 116 32.261 -44.078 -49.667 1.00 29.10 N
ATOM 17 C5 G A 116 32.258 -45.454 -49.631 1.00 31.32 C
ATOM 18 C6 G A 116 32.566 -46.393 -50.642 1.00 43.34 C
ATOM 19 O6 G A 116 32.898 -46.176 -51.844 1.00 48.57 O
ATOM 20 N1 G A 116 32.466 -47.700 -50.160 1.00 38.28 N
ATOM 21 C2 G A 116 32.108 -48.047 -48.869 1.00 37.16 C
ATOM 22 N2 G A 116 32.090 -49.361 -48.592 1.00 42.25 N
ATOM 23 N3 G A 116 31.803 -47.174 -47.927 1.00 31.46 N
ATOM 24 C4 G A 116 31.911 -45.910 -48.372 1.00 30.27 C
ATOM 25 P G A 117 35.221 -43.351 -43.722 1.00 55.08 P
ATOM 26 OP1 G A 117 35.620 -42.777 -42.403 1.00 48.92 O
ATOM 27 OP2 G A 117 35.793 -42.786 -44.968 1.00 53.21 O
ATOM 28 O5' G A 117 35.484 -44.924 -43.760 1.00 48.60 O
TER
ATOM 1 O3' C B 108 32.120 -51.628 -51.575 1.00 45.52 O
ATOM 2 P G B 109 33.148 -50.867 -52.532 1.00 52.17 P
ATOM 3 OP1 G B 109 33.711 -49.738 -51.740 1.00 55.43 O
ATOM 4 OP2 G B 109 32.437 -50.593 -53.807 1.00 51.97 O
ATOM 5 O5' G B 109 34.291 -51.941 -52.854 1.00 48.11 O
ATOM 6 C5' G B 109 35.627 -51.798 -52.366 1.00 46.07 C
ATOM 7 C4' G B 109 36.525 -52.832 -53.008 1.00 46.75 C
ATOM 8 O4' G B 109 35.746 -54.043 -53.172 1.00 54.78 O
ATOM 9 C3' G B 109 37.041 -52.520 -54.406 1.00 47.56 C
ATOM 10 O3' G B 109 38.262 -51.787 -54.344 1.00 50.36 O
ATOM 11 C2' G B 109 37.266 -53.914 -54.993 1.00 49.13 C
ATOM 12 O2' G B 109 38.458 -54.535 -54.565 1.00 43.62 O
ATOM 13 C1' G B 109 36.128 -54.708 -54.365 1.00 55.69 C
ATOM 14 N9 G B 109 34.963 -54.833 -55.242 1.00 57.81 N
ATOM 15 C8 G B 109 33.923 -53.943 -55.356 1.00 56.34 C
ATOM 16 N7 G B 109 33.014 -54.321 -56.214 1.00 56.59 N
ATOM 17 C5 G B 109 33.473 -55.540 -56.698 1.00 59.01 C
ATOM 18 C6 G B 109 32.894 -56.433 -57.650 1.00 58.80 C
ATOM 19 O6 G B 109 31.813 -56.327 -58.254 1.00 58.88 O
ATOM 20 N1 G B 109 33.703 -57.549 -57.865 1.00 57.24 N
ATOM 21 C2 G B 109 34.902 -57.790 -57.238 1.00 59.42 C
ATOM 22 N2 G B 109 35.533 -58.931 -57.583 1.00 53.95 N
ATOM 23 N3 G B 109 35.444 -56.974 -56.338 1.00 58.92 N
ATOM 24 C4 G B 109 34.681 -55.873 -56.119 1.00 58.20 C
ATOM 25 P A B 110 38.249 -50.179 -54.465 1.00 58.26 P
ATOM 26 OP1 A B 110 39.088 -49.616 -53.380 1.00 55.61 O
ATOM 27 OP2 A B 110 36.832 -49.736 -54.598 1.00 51.00 O
ATOM 28 O5' A B 110 39.079 -49.855 -55.785 1.00 48.11 O
TER
Atoms:
OP1: (33.203,-38.721,-46.506)
OP2: (33.279,-39.972,-48.767)
C3': (32.994,-43.465,-45.075)
C1': (31.368,-44.743,-46.212)
C5': (31.754,-41.269,-45.472)
O6: (32.898,-46.176,-51.844)
O4': (30.822,-43.468,-45.957)
C8: (31.937,-43.723,-48.459)
C2: (32.108,-48.047,-48.869)
C6: (32.566,-46.393,-50.642)
C5: (32.258,-45.454,-49.631)
C4: (31.911,-45.910,-48.372)
P: (32.618,-39.723,-47.447)
C4': (31.674,-42.728,-45.056)
C2': (32.574,-44.912,-45.297)
O2': (32.110,-45.537,-44.122)
N1: (32.466,-47.700,-50.160)
N2: (32.090,-49.361,-48.592)
N3: (31.803,-47.174,-47.927)
N7: (32.261,-44.078,-49.667)
N9: (31.721,-44.792,-47.623)
O5': (32.433,-41.142,-46.728)
O3': (33.630,-43.248,-43.829)
OP2: (33.279,-39.972,-48.767)
C3': (32.994,-43.465,-45.075)
C1': (31.368,-44.743,-46.212)
C5': (31.754,-41.269,-45.472)
O6: (32.898,-46.176,-51.844)
O4': (30.822,-43.468,-45.957)
C8: (31.937,-43.723,-48.459)
C2: (32.108,-48.047,-48.869)
C6: (32.566,-46.393,-50.642)
C5: (32.258,-45.454,-49.631)
C4: (31.911,-45.910,-48.372)
P: (32.618,-39.723,-47.447)
C4': (31.674,-42.728,-45.056)
C2': (32.574,-44.912,-45.297)
O2': (32.110,-45.537,-44.122)
N1: (32.466,-47.700,-50.160)
N2: (32.090,-49.361,-48.592)
N3: (31.803,-47.174,-47.927)
N7: (32.261,-44.078,-49.667)
N9: (31.721,-44.792,-47.623)
O5': (32.433,-41.142,-46.728)
O3': (33.630,-43.248,-43.829)
OP1: (33.711,-49.738,-51.740)
OP2: (32.437,-50.593,-53.807)
C3': (37.041,-52.520,-54.406)
C1': (36.128,-54.708,-54.365)
C5': (35.627,-51.798,-52.366)
O6: (31.813,-56.327,-58.254)
O4': (35.746,-54.043,-53.172)
C8: (33.923,-53.943,-55.356)
C2: (34.902,-57.790,-57.238)
C6: (32.894,-56.433,-57.650)
C5: (33.473,-55.540,-56.698)
C4: (34.681,-55.873,-56.119)
P: (33.148,-50.867,-52.532)
C4': (36.525,-52.832,-53.008)
C2': (37.266,-53.914,-54.993)
O2': (38.458,-54.535,-54.565)
N1: (33.703,-57.549,-57.865)
N2: (35.533,-58.931,-57.583)
N3: (35.444,-56.974,-56.338)
N7: (33.014,-54.321,-56.214)
N9: (34.963,-54.833,-55.242)
O5': (34.291,-51.941,-52.854)
O3': (38.262,-51.787,-54.344)
OP2: (32.437,-50.593,-53.807)
C3': (37.041,-52.520,-54.406)
C1': (36.128,-54.708,-54.365)
C5': (35.627,-51.798,-52.366)
O6: (31.813,-56.327,-58.254)
O4': (35.746,-54.043,-53.172)
C8: (33.923,-53.943,-55.356)
C2: (34.902,-57.790,-57.238)
C6: (32.894,-56.433,-57.650)
C5: (33.473,-55.540,-56.698)
C4: (34.681,-55.873,-56.119)
P: (33.148,-50.867,-52.532)
C4': (36.525,-52.832,-53.008)
C2': (37.266,-53.914,-54.993)
O2': (38.458,-54.535,-54.565)
N1: (33.703,-57.549,-57.865)
N2: (35.533,-58.931,-57.583)
N3: (35.444,-56.974,-56.338)
N7: (33.014,-54.321,-56.214)
N9: (34.963,-54.833,-55.242)
O5': (34.291,-51.941,-52.854)
O3': (38.262,-51.787,-54.344)
Image (generated by PyMOL):