Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A116:A109
Extra
PDB:
ATOM 1 O3' G A 115 31.634 -38.723 -46.358 1.00 42.90 O
ATOM 2 P G A 116 33.179 -39.081 -46.098 1.00 37.36 P
ATOM 3 OP1 G A 116 33.702 -38.086 -45.127 1.00 28.86 O
ATOM 4 OP2 G A 116 33.831 -39.202 -47.431 1.00 40.18 O
ATOM 5 O5' G A 116 33.086 -40.503 -45.417 1.00 31.22 O
ATOM 6 C5' G A 116 32.306 -40.691 -44.244 1.00 37.77 C
ATOM 7 C4' G A 116 32.124 -42.155 -43.930 1.00 34.19 C
ATOM 8 O4' G A 116 31.348 -42.787 -44.972 1.00 34.07 O
ATOM 9 C3' G A 116 33.385 -42.995 -43.885 1.00 37.76 C
ATOM 10 O3' G A 116 34.141 -42.787 -42.689 1.00 48.78 O
ATOM 11 C2' G A 116 32.804 -44.396 -44.034 1.00 29.63 C
ATOM 12 O2' G A 116 32.175 -44.791 -42.833 1.00 31.60 O
ATOM 13 C1' G A 116 31.703 -44.142 -45.065 1.00 29.33 C
ATOM 14 N9 G A 116 32.132 -44.419 -46.441 1.00 23.57 N
ATOM 15 C8 G A 116 32.470 -43.527 -47.421 1.00 28.10 C
ATOM 16 N7 G A 116 32.790 -44.106 -48.553 1.00 27.33 N
ATOM 17 C5 G A 116 32.626 -45.446 -48.283 1.00 20.94 C
ATOM 18 C6 G A 116 32.839 -46.552 -49.111 1.00 22.07 C
ATOM 19 O6 G A 116 33.218 -46.497 -50.278 1.00 32.96 O
ATOM 20 N1 G A 116 32.570 -47.757 -48.455 1.00 18.17 N
ATOM 21 C2 G A 116 32.143 -47.826 -47.138 1.00 28.85 C
ATOM 22 N2 G A 116 31.929 -49.050 -46.601 1.00 35.99 N
ATOM 23 N3 G A 116 31.956 -46.773 -46.355 1.00 24.19 N
ATOM 24 C4 G A 116 32.216 -45.646 -46.998 1.00 21.15 C
ATOM 25 P G A 117 35.738 -43.082 -42.619 1.00 36.84 P
ATOM 26 OP1 G A 117 36.340 -42.025 -41.767 1.00 37.60 O
ATOM 27 OP2 G A 117 36.245 -43.258 -44.000 1.00 26.47 O
ATOM 28 O5' G A 117 35.768 -44.464 -41.855 1.00 29.91 O
TER
ATOM 1 O3' C B 108 32.669 -51.354 -50.150 1.00 35.41 O
ATOM 2 P G B 109 33.577 -50.412 -51.091 1.00 46.48 P
ATOM 3 OP1 G B 109 34.170 -49.360 -50.202 1.00 33.79 O
ATOM 4 OP2 G B 109 32.742 -49.982 -52.222 1.00 41.18 O
ATOM 5 O5' G B 109 34.717 -51.402 -51.610 1.00 33.64 O
ATOM 6 C5' G B 109 36.027 -51.320 -51.065 1.00 37.80 C
ATOM 7 C4' G B 109 36.949 -52.330 -51.669 1.00 32.73 C
ATOM 8 O4' G B 109 36.238 -53.560 -51.878 1.00 34.73 O
ATOM 9 C3' G B 109 37.495 -51.977 -53.029 1.00 31.32 C
ATOM 10 O3' G B 109 38.607 -51.142 -52.943 1.00 26.57 O
ATOM 11 C2' G B 109 37.808 -53.330 -53.636 1.00 35.17 C
ATOM 12 O2' G B 109 39.049 -53.815 -53.156 1.00 41.59 O
ATOM 13 C1' G B 109 36.702 -54.188 -53.049 1.00 40.32 C
ATOM 14 N9 G B 109 35.569 -54.341 -53.967 1.00 40.95 N
ATOM 15 C8 G B 109 34.426 -53.603 -53.987 1.00 39.93 C
ATOM 16 N7 G B 109 33.599 -54.010 -54.904 1.00 43.80 N
ATOM 17 C5 G B 109 34.224 -55.078 -55.493 1.00 37.41 C
ATOM 18 C6 G B 109 33.801 -55.919 -56.543 1.00 40.98 C
ATOM 19 O6 G B 109 32.755 -55.897 -57.177 1.00 44.53 O
ATOM 20 N1 G B 109 34.753 -56.879 -56.841 1.00 46.38 N
ATOM 21 C2 G B 109 35.956 -57.010 -56.193 1.00 44.63 C
ATOM 22 N2 G B 109 36.718 -58.006 -56.639 1.00 43.60 N
ATOM 23 N3 G B 109 36.373 -56.228 -55.205 1.00 42.24 N
ATOM 24 C4 G B 109 35.448 -55.296 -54.920 1.00 39.75 C
ATOM 25 P A B 110 38.438 -49.559 -53.029 1.00 42.62 P
ATOM 26 OP1 A B 110 39.228 -48.975 -51.921 1.00 41.94 O
ATOM 27 OP2 A B 110 36.992 -49.266 -53.094 1.00 34.37 O
ATOM 28 O5' A B 110 39.128 -49.227 -54.417 1.00 40.52 O
TER
ATOM 2 P G A 116 33.179 -39.081 -46.098 1.00 37.36 P
ATOM 3 OP1 G A 116 33.702 -38.086 -45.127 1.00 28.86 O
ATOM 4 OP2 G A 116 33.831 -39.202 -47.431 1.00 40.18 O
ATOM 5 O5' G A 116 33.086 -40.503 -45.417 1.00 31.22 O
ATOM 6 C5' G A 116 32.306 -40.691 -44.244 1.00 37.77 C
ATOM 7 C4' G A 116 32.124 -42.155 -43.930 1.00 34.19 C
ATOM 8 O4' G A 116 31.348 -42.787 -44.972 1.00 34.07 O
ATOM 9 C3' G A 116 33.385 -42.995 -43.885 1.00 37.76 C
ATOM 10 O3' G A 116 34.141 -42.787 -42.689 1.00 48.78 O
ATOM 11 C2' G A 116 32.804 -44.396 -44.034 1.00 29.63 C
ATOM 12 O2' G A 116 32.175 -44.791 -42.833 1.00 31.60 O
ATOM 13 C1' G A 116 31.703 -44.142 -45.065 1.00 29.33 C
ATOM 14 N9 G A 116 32.132 -44.419 -46.441 1.00 23.57 N
ATOM 15 C8 G A 116 32.470 -43.527 -47.421 1.00 28.10 C
ATOM 16 N7 G A 116 32.790 -44.106 -48.553 1.00 27.33 N
ATOM 17 C5 G A 116 32.626 -45.446 -48.283 1.00 20.94 C
ATOM 18 C6 G A 116 32.839 -46.552 -49.111 1.00 22.07 C
ATOM 19 O6 G A 116 33.218 -46.497 -50.278 1.00 32.96 O
ATOM 20 N1 G A 116 32.570 -47.757 -48.455 1.00 18.17 N
ATOM 21 C2 G A 116 32.143 -47.826 -47.138 1.00 28.85 C
ATOM 22 N2 G A 116 31.929 -49.050 -46.601 1.00 35.99 N
ATOM 23 N3 G A 116 31.956 -46.773 -46.355 1.00 24.19 N
ATOM 24 C4 G A 116 32.216 -45.646 -46.998 1.00 21.15 C
ATOM 25 P G A 117 35.738 -43.082 -42.619 1.00 36.84 P
ATOM 26 OP1 G A 117 36.340 -42.025 -41.767 1.00 37.60 O
ATOM 27 OP2 G A 117 36.245 -43.258 -44.000 1.00 26.47 O
ATOM 28 O5' G A 117 35.768 -44.464 -41.855 1.00 29.91 O
TER
ATOM 1 O3' C B 108 32.669 -51.354 -50.150 1.00 35.41 O
ATOM 2 P G B 109 33.577 -50.412 -51.091 1.00 46.48 P
ATOM 3 OP1 G B 109 34.170 -49.360 -50.202 1.00 33.79 O
ATOM 4 OP2 G B 109 32.742 -49.982 -52.222 1.00 41.18 O
ATOM 5 O5' G B 109 34.717 -51.402 -51.610 1.00 33.64 O
ATOM 6 C5' G B 109 36.027 -51.320 -51.065 1.00 37.80 C
ATOM 7 C4' G B 109 36.949 -52.330 -51.669 1.00 32.73 C
ATOM 8 O4' G B 109 36.238 -53.560 -51.878 1.00 34.73 O
ATOM 9 C3' G B 109 37.495 -51.977 -53.029 1.00 31.32 C
ATOM 10 O3' G B 109 38.607 -51.142 -52.943 1.00 26.57 O
ATOM 11 C2' G B 109 37.808 -53.330 -53.636 1.00 35.17 C
ATOM 12 O2' G B 109 39.049 -53.815 -53.156 1.00 41.59 O
ATOM 13 C1' G B 109 36.702 -54.188 -53.049 1.00 40.32 C
ATOM 14 N9 G B 109 35.569 -54.341 -53.967 1.00 40.95 N
ATOM 15 C8 G B 109 34.426 -53.603 -53.987 1.00 39.93 C
ATOM 16 N7 G B 109 33.599 -54.010 -54.904 1.00 43.80 N
ATOM 17 C5 G B 109 34.224 -55.078 -55.493 1.00 37.41 C
ATOM 18 C6 G B 109 33.801 -55.919 -56.543 1.00 40.98 C
ATOM 19 O6 G B 109 32.755 -55.897 -57.177 1.00 44.53 O
ATOM 20 N1 G B 109 34.753 -56.879 -56.841 1.00 46.38 N
ATOM 21 C2 G B 109 35.956 -57.010 -56.193 1.00 44.63 C
ATOM 22 N2 G B 109 36.718 -58.006 -56.639 1.00 43.60 N
ATOM 23 N3 G B 109 36.373 -56.228 -55.205 1.00 42.24 N
ATOM 24 C4 G B 109 35.448 -55.296 -54.920 1.00 39.75 C
ATOM 25 P A B 110 38.438 -49.559 -53.029 1.00 42.62 P
ATOM 26 OP1 A B 110 39.228 -48.975 -51.921 1.00 41.94 O
ATOM 27 OP2 A B 110 36.992 -49.266 -53.094 1.00 34.37 O
ATOM 28 O5' A B 110 39.128 -49.227 -54.417 1.00 40.52 O
TER
Atoms:
OP1: (33.702,-38.086,-45.127)
OP2: (33.831,-39.202,-47.431)
C3': (33.385,-42.995,-43.885)
C1': (31.703,-44.142,-45.065)
C5': (32.306,-40.691,-44.244)
O6: (33.218,-46.497,-50.278)
O4': (31.348,-42.787,-44.972)
C8: (32.470,-43.527,-47.421)
C2: (32.143,-47.826,-47.138)
C6: (32.839,-46.552,-49.111)
C5: (32.626,-45.446,-48.283)
C4: (32.216,-45.646,-46.998)
P: (33.179,-39.081,-46.098)
C4': (32.124,-42.155,-43.930)
C2': (32.804,-44.396,-44.034)
O2': (32.175,-44.791,-42.833)
N1: (32.570,-47.757,-48.455)
N2: (31.929,-49.050,-46.601)
N3: (31.956,-46.773,-46.355)
N7: (32.790,-44.106,-48.553)
N9: (32.132,-44.419,-46.441)
O5': (33.086,-40.503,-45.417)
O3': (34.141,-42.787,-42.689)
OP2: (33.831,-39.202,-47.431)
C3': (33.385,-42.995,-43.885)
C1': (31.703,-44.142,-45.065)
C5': (32.306,-40.691,-44.244)
O6: (33.218,-46.497,-50.278)
O4': (31.348,-42.787,-44.972)
C8: (32.470,-43.527,-47.421)
C2: (32.143,-47.826,-47.138)
C6: (32.839,-46.552,-49.111)
C5: (32.626,-45.446,-48.283)
C4: (32.216,-45.646,-46.998)
P: (33.179,-39.081,-46.098)
C4': (32.124,-42.155,-43.930)
C2': (32.804,-44.396,-44.034)
O2': (32.175,-44.791,-42.833)
N1: (32.570,-47.757,-48.455)
N2: (31.929,-49.050,-46.601)
N3: (31.956,-46.773,-46.355)
N7: (32.790,-44.106,-48.553)
N9: (32.132,-44.419,-46.441)
O5': (33.086,-40.503,-45.417)
O3': (34.141,-42.787,-42.689)
OP1: (34.170,-49.360,-50.202)
OP2: (32.742,-49.982,-52.222)
C3': (37.495,-51.977,-53.029)
C1': (36.702,-54.188,-53.049)
C5': (36.027,-51.320,-51.065)
O6: (32.755,-55.897,-57.177)
O4': (36.238,-53.560,-51.878)
C8: (34.426,-53.603,-53.987)
C2: (35.956,-57.010,-56.193)
C6: (33.801,-55.919,-56.543)
C5: (34.224,-55.078,-55.493)
C4: (35.448,-55.296,-54.920)
P: (33.577,-50.412,-51.091)
C4': (36.949,-52.330,-51.669)
C2': (37.808,-53.330,-53.636)
O2': (39.049,-53.815,-53.156)
N1: (34.753,-56.879,-56.841)
N2: (36.718,-58.006,-56.639)
N3: (36.373,-56.228,-55.205)
N7: (33.599,-54.010,-54.904)
N9: (35.569,-54.341,-53.967)
O5': (34.717,-51.402,-51.610)
O3': (38.607,-51.142,-52.943)
OP2: (32.742,-49.982,-52.222)
C3': (37.495,-51.977,-53.029)
C1': (36.702,-54.188,-53.049)
C5': (36.027,-51.320,-51.065)
O6: (32.755,-55.897,-57.177)
O4': (36.238,-53.560,-51.878)
C8: (34.426,-53.603,-53.987)
C2: (35.956,-57.010,-56.193)
C6: (33.801,-55.919,-56.543)
C5: (34.224,-55.078,-55.493)
C4: (35.448,-55.296,-54.920)
P: (33.577,-50.412,-51.091)
C4': (36.949,-52.330,-51.669)
C2': (37.808,-53.330,-53.636)
O2': (39.049,-53.815,-53.156)
N1: (34.753,-56.879,-56.841)
N2: (36.718,-58.006,-56.639)
N3: (36.373,-56.228,-55.205)
N7: (33.599,-54.010,-54.904)
N9: (35.569,-54.341,-53.967)
O5': (34.717,-51.402,-51.610)
O3': (38.607,-51.142,-52.943)
Image (generated by PyMOL):