ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G6E:0578:0556

Extra

PDB:
ATOM 1 O3' U A 577 -11.886 93.691 106.660 1.00 69.07 O
ATOM 2 P A A 578 -11.459 95.041 105.902 1.00 71.46 P
ATOM 3 OP1 A A 578 -12.602 95.518 105.084 1.00 73.06 O
ATOM 4 OP2 A A 578 -10.146 94.799 105.248 1.00 72.56 O
ATOM 5 O5' A A 578 -11.233 96.079 107.088 1.00 69.13 O
ATOM 6 C5' A A 578 -12.340 96.697 107.755 1.00 67.18 C
ATOM 7 C4' A A 578 -11.843 97.765 108.691 1.00 66.85 C
ATOM 8 O4' A A 578 -11.076 97.144 109.754 1.00 66.64 O
ATOM 9 C3' A A 578 -10.860 98.738 108.069 1.00 68.21 C
ATOM 10 O3' A A 578 -11.480 99.757 107.309 1.00 71.87 O
ATOM 11 C2' A A 578 -10.099 99.256 109.277 1.00 67.68 C
ATOM 12 O2' A A 578 -10.771 100.265 110.002 1.00 68.48 O
ATOM 13 C1' A A 578 -9.983 97.981 110.110 1.00 65.94 C
ATOM 14 N9 A A 578 -8.740 97.264 109.822 1.00 63.76 N
ATOM 15 C8 A A 578 -8.574 96.100 109.116 1.00 61.78 C
ATOM 16 N7 A A 578 -7.329 95.709 109.032 1.00 61.94 N
ATOM 17 C5 A A 578 -6.626 96.681 109.729 1.00 61.63 C
ATOM 18 C6 A A 578 -5.259 96.836 110.014 1.00 62.29 C
ATOM 19 N6 A A 578 -4.315 95.978 109.618 1.00 62.46 N
ATOM 20 N1 A A 578 -4.889 97.916 110.734 1.00 61.98 N
ATOM 21 C2 A A 578 -5.836 98.773 111.135 1.00 62.39 C
ATOM 22 N3 A A 578 -7.148 98.732 110.933 1.00 61.60 N
ATOM 23 C4 A A 578 -7.481 97.646 110.216 1.00 61.74 C
ATOM 24 P A A 579 -10.900 100.104 105.853 1.00 74.50 P
ATOM 25 OP1 A A 579 -11.622 101.298 105.339 1.00 74.72 O
ATOM 26 OP2 A A 579 -10.900 98.840 105.051 1.00 73.44 O
ATOM 27 O5' A A 579 -9.390 100.526 106.153 1.00 73.60 O
TER

ATOM 1 O3' U B 555 4.180 92.759 107.713 1.00 49.62 O
ATOM 2 P G B 556 3.634 92.132 109.084 1.00 49.21 P
ATOM 3 OP1 G B 556 4.641 92.443 110.130 1.00 48.72 O
ATOM 4 OP2 G B 556 3.258 90.715 108.822 1.00 46.46 O
ATOM 5 O5' G B 556 2.318 92.977 109.385 1.00 47.54 O
ATOM 6 C5' G B 556 2.401 94.325 109.871 1.00 51.23 C
ATOM 7 C4' G B 556 1.017 94.879 110.120 1.00 55.12 C
ATOM 8 O4' G B 556 0.328 95.080 108.855 1.00 55.78 O
ATOM 9 C3' G B 556 0.077 93.971 110.895 1.00 57.51 C
ATOM 10 O3' G B 556 0.307 93.983 112.296 1.00 60.13 O
ATOM 11 C2' G B 556 -1.281 94.527 110.504 1.00 56.58 C
ATOM 12 O2' G B 556 -1.574 95.746 111.154 1.00 56.59 O
ATOM 13 C1' G B 556 -1.056 94.793 109.017 1.00 55.82 C
ATOM 14 N9 G B 556 -1.380 93.614 108.218 1.00 55.19 N
ATOM 15 C8 G B 556 -0.526 92.609 107.830 1.00 53.84 C
ATOM 16 N7 G B 556 -1.113 91.684 107.119 1.00 54.09 N
ATOM 17 C5 G B 556 -2.433 92.100 107.036 1.00 54.60 C
ATOM 18 C6 G B 556 -3.544 91.503 106.389 1.00 53.84 C
ATOM 19 O6 G B 556 -3.584 90.449 105.742 1.00 55.36 O
ATOM 20 N1 G B 556 -4.696 92.262 106.549 1.00 52.74 N
ATOM 21 C2 G B 556 -4.774 93.443 107.243 1.00 54.55 C
ATOM 22 N2 G B 556 -5.979 94.030 107.280 1.00 54.34 N
ATOM 23 N3 G B 556 -3.748 94.010 107.854 1.00 55.30 N
ATOM 24 C4 G B 556 -2.616 93.290 107.708 1.00 55.63 C
ATOM 25 P A B 557 -0.133 92.713 113.180 1.00 62.67 P
ATOM 26 OP1 A B 557 0.518 92.885 114.505 1.00 63.12 O
ATOM 27 OP2 A B 557 0.076 91.451 112.417 1.00 59.09 O
ATOM 28 O5' A B 557 -1.702 92.923 113.349 1.00 63.49 O
TER

Atoms:
OP1: (-12.602,95.518,105.084)
OP2: (-10.146,94.799,105.248)
C3': (-10.860,98.738,108.069)
C1': (-9.983,97.981,110.110)
C5': (-12.340,96.697,107.755)
O4': (-11.076,97.144,109.754)
C8: (-8.574,96.100,109.116)
O2': (-10.771,100.265,110.002)
C6: (-5.259,96.836,110.014)
C5: (-6.626,96.681,109.729)
C4: (-7.481,97.646,110.216)
P: (-11.459,95.041,105.902)
C4': (-11.843,97.765,108.691)
C2': (-10.099,99.256,109.277)
C2: (-5.836,98.773,111.135)
N1: (-4.889,97.916,110.734)
N3: (-7.148,98.732,110.933)
N6: (-4.315,95.978,109.618)
N7: (-7.329,95.709,109.032)
N9: (-8.740,97.264,109.822)
O5': (-11.233,96.079,107.088)
O3': (-11.480,99.757,107.309)
OP1: (4.641,92.443,110.130)
OP2: (3.258,90.715,108.822)
C3': (0.077,93.971,110.895)
C1': (-1.056,94.793,109.017)
C5': (2.401,94.325,109.871)
O6: (-3.584,90.449,105.742)
O4': (0.328,95.080,108.855)
C8: (-0.526,92.609,107.830)
C2: (-4.774,93.443,107.243)
C6: (-3.544,91.503,106.389)
C5: (-2.433,92.100,107.036)
C4: (-2.616,93.290,107.708)
P: (3.634,92.132,109.084)
C4': (1.017,94.879,110.120)
C2': (-1.281,94.527,110.504)
O2': (-1.574,95.746,111.154)
N1: (-4.696,92.262,106.549)
N2: (-5.979,94.030,107.280)
N3: (-3.748,94.010,107.854)
N7: (-1.113,91.684,107.119)
N9: (-1.380,93.614,108.218)
O5': (2.318,92.977,109.385)
O3': (0.307,93.983,112.296)
Image (generated by PyMOL):
PyMOL image
show in jmol