Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A116:A109
Extra
PDB:
ATOM 1 O3' G A 115 31.751 -38.592 -46.246 1.00 40.88 O
ATOM 2 P G A 116 33.310 -38.908 -46.032 1.00 40.37 P
ATOM 3 OP1 G A 116 33.821 -37.888 -45.075 1.00 28.11 O
ATOM 4 OP2 G A 116 33.935 -39.023 -47.404 1.00 28.19 O
ATOM 5 O5' G A 116 33.296 -40.327 -45.344 1.00 26.65 O
ATOM 6 C5' G A 116 32.635 -40.523 -44.114 1.00 27.96 C
ATOM 7 C4' G A 116 32.393 -41.990 -43.860 1.00 30.51 C
ATOM 8 O4' G A 116 31.634 -42.561 -44.953 1.00 35.75 O
ATOM 9 C3' G A 116 33.621 -42.872 -43.809 1.00 36.81 C
ATOM 10 O3' G A 116 34.326 -42.759 -42.586 1.00 41.53 O
ATOM 11 C2' G A 116 33.019 -44.248 -44.042 1.00 35.01 C
ATOM 12 O2' G A 116 32.382 -44.702 -42.861 1.00 35.15 O
ATOM 13 C1' G A 116 31.933 -43.929 -45.070 1.00 29.06 C
ATOM 14 N9 G A 116 32.359 -44.203 -46.448 1.00 27.13 N
ATOM 15 C8 G A 116 32.709 -43.311 -47.433 1.00 33.89 C
ATOM 16 N7 G A 116 33.027 -43.896 -48.575 1.00 30.73 N
ATOM 17 C5 G A 116 32.854 -45.239 -48.290 1.00 23.71 C
ATOM 18 C6 G A 116 33.060 -46.343 -49.121 1.00 26.85 C
ATOM 19 O6 G A 116 33.442 -46.278 -50.293 1.00 38.97 O
ATOM 20 N1 G A 116 32.780 -47.550 -48.472 1.00 21.18 N
ATOM 21 C2 G A 116 32.364 -47.616 -47.163 1.00 30.06 C
ATOM 22 N2 G A 116 32.154 -48.848 -46.654 1.00 39.95 N
ATOM 23 N3 G A 116 32.182 -46.569 -46.375 1.00 26.24 N
ATOM 24 C4 G A 116 32.445 -45.436 -47.005 1.00 20.41 C
ATOM 25 P G A 117 35.934 -42.840 -42.549 1.00 28.42 P
ATOM 26 OP1 G A 117 36.416 -41.587 -41.965 1.00 36.65 O
ATOM 27 OP2 G A 117 36.412 -43.222 -43.903 1.00 32.17 O
ATOM 28 O5' G A 117 36.182 -44.028 -41.544 1.00 32.86 O
TER
ATOM 1 O3' C B 108 32.810 -51.228 -50.116 1.00 35.94 O
ATOM 2 P G B 109 33.759 -50.280 -51.006 1.00 41.77 P
ATOM 3 OP1 G B 109 34.335 -49.252 -50.074 1.00 32.78 O
ATOM 4 OP2 G B 109 32.959 -49.824 -52.161 1.00 38.05 O
ATOM 5 O5' G B 109 34.912 -51.264 -51.508 1.00 33.94 O
ATOM 6 C5' G B 109 36.245 -51.096 -51.040 1.00 32.08 C
ATOM 7 C4' G B 109 37.175 -52.147 -51.586 1.00 33.25 C
ATOM 8 O4' G B 109 36.470 -53.390 -51.773 1.00 35.93 O
ATOM 9 C3' G B 109 37.778 -51.854 -52.935 1.00 30.91 C
ATOM 10 O3' G B 109 38.893 -51.006 -52.836 1.00 31.91 O
ATOM 11 C2' G B 109 38.124 -53.237 -53.456 1.00 36.22 C
ATOM 12 O2' G B 109 39.339 -53.691 -52.874 1.00 36.58 O
ATOM 13 C1' G B 109 36.980 -54.066 -52.896 1.00 34.32 C
ATOM 14 N9 G B 109 35.878 -54.227 -53.850 1.00 43.87 N
ATOM 15 C8 G B 109 34.739 -53.449 -53.836 1.00 43.17 C
ATOM 16 N7 G B 109 33.862 -53.794 -54.737 1.00 42.64 N
ATOM 17 C5 G B 109 34.445 -54.878 -55.346 1.00 35.73 C
ATOM 18 C6 G B 109 33.947 -55.636 -56.397 1.00 36.12 C
ATOM 19 O6 G B 109 32.881 -55.481 -56.964 1.00 46.33 O
ATOM 20 N1 G B 109 34.817 -56.638 -56.777 1.00 40.04 N
ATOM 21 C2 G B 109 36.025 -56.874 -56.184 1.00 40.17 C
ATOM 22 N2 G B 109 36.683 -57.905 -56.720 1.00 41.29 N
ATOM 23 N3 G B 109 36.539 -56.159 -55.184 1.00 38.76 N
ATOM 24 C4 G B 109 35.686 -55.180 -54.820 1.00 42.26 C
ATOM 25 P A B 110 38.702 -49.427 -52.963 1.00 43.26 P
ATOM 26 OP1 A B 110 39.530 -48.798 -51.904 1.00 33.35 O
ATOM 27 OP2 A B 110 37.219 -49.158 -52.989 1.00 29.71 O
ATOM 28 O5' A B 110 39.337 -49.126 -54.379 1.00 31.95 O
TER
ATOM 2 P G A 116 33.310 -38.908 -46.032 1.00 40.37 P
ATOM 3 OP1 G A 116 33.821 -37.888 -45.075 1.00 28.11 O
ATOM 4 OP2 G A 116 33.935 -39.023 -47.404 1.00 28.19 O
ATOM 5 O5' G A 116 33.296 -40.327 -45.344 1.00 26.65 O
ATOM 6 C5' G A 116 32.635 -40.523 -44.114 1.00 27.96 C
ATOM 7 C4' G A 116 32.393 -41.990 -43.860 1.00 30.51 C
ATOM 8 O4' G A 116 31.634 -42.561 -44.953 1.00 35.75 O
ATOM 9 C3' G A 116 33.621 -42.872 -43.809 1.00 36.81 C
ATOM 10 O3' G A 116 34.326 -42.759 -42.586 1.00 41.53 O
ATOM 11 C2' G A 116 33.019 -44.248 -44.042 1.00 35.01 C
ATOM 12 O2' G A 116 32.382 -44.702 -42.861 1.00 35.15 O
ATOM 13 C1' G A 116 31.933 -43.929 -45.070 1.00 29.06 C
ATOM 14 N9 G A 116 32.359 -44.203 -46.448 1.00 27.13 N
ATOM 15 C8 G A 116 32.709 -43.311 -47.433 1.00 33.89 C
ATOM 16 N7 G A 116 33.027 -43.896 -48.575 1.00 30.73 N
ATOM 17 C5 G A 116 32.854 -45.239 -48.290 1.00 23.71 C
ATOM 18 C6 G A 116 33.060 -46.343 -49.121 1.00 26.85 C
ATOM 19 O6 G A 116 33.442 -46.278 -50.293 1.00 38.97 O
ATOM 20 N1 G A 116 32.780 -47.550 -48.472 1.00 21.18 N
ATOM 21 C2 G A 116 32.364 -47.616 -47.163 1.00 30.06 C
ATOM 22 N2 G A 116 32.154 -48.848 -46.654 1.00 39.95 N
ATOM 23 N3 G A 116 32.182 -46.569 -46.375 1.00 26.24 N
ATOM 24 C4 G A 116 32.445 -45.436 -47.005 1.00 20.41 C
ATOM 25 P G A 117 35.934 -42.840 -42.549 1.00 28.42 P
ATOM 26 OP1 G A 117 36.416 -41.587 -41.965 1.00 36.65 O
ATOM 27 OP2 G A 117 36.412 -43.222 -43.903 1.00 32.17 O
ATOM 28 O5' G A 117 36.182 -44.028 -41.544 1.00 32.86 O
TER
ATOM 1 O3' C B 108 32.810 -51.228 -50.116 1.00 35.94 O
ATOM 2 P G B 109 33.759 -50.280 -51.006 1.00 41.77 P
ATOM 3 OP1 G B 109 34.335 -49.252 -50.074 1.00 32.78 O
ATOM 4 OP2 G B 109 32.959 -49.824 -52.161 1.00 38.05 O
ATOM 5 O5' G B 109 34.912 -51.264 -51.508 1.00 33.94 O
ATOM 6 C5' G B 109 36.245 -51.096 -51.040 1.00 32.08 C
ATOM 7 C4' G B 109 37.175 -52.147 -51.586 1.00 33.25 C
ATOM 8 O4' G B 109 36.470 -53.390 -51.773 1.00 35.93 O
ATOM 9 C3' G B 109 37.778 -51.854 -52.935 1.00 30.91 C
ATOM 10 O3' G B 109 38.893 -51.006 -52.836 1.00 31.91 O
ATOM 11 C2' G B 109 38.124 -53.237 -53.456 1.00 36.22 C
ATOM 12 O2' G B 109 39.339 -53.691 -52.874 1.00 36.58 O
ATOM 13 C1' G B 109 36.980 -54.066 -52.896 1.00 34.32 C
ATOM 14 N9 G B 109 35.878 -54.227 -53.850 1.00 43.87 N
ATOM 15 C8 G B 109 34.739 -53.449 -53.836 1.00 43.17 C
ATOM 16 N7 G B 109 33.862 -53.794 -54.737 1.00 42.64 N
ATOM 17 C5 G B 109 34.445 -54.878 -55.346 1.00 35.73 C
ATOM 18 C6 G B 109 33.947 -55.636 -56.397 1.00 36.12 C
ATOM 19 O6 G B 109 32.881 -55.481 -56.964 1.00 46.33 O
ATOM 20 N1 G B 109 34.817 -56.638 -56.777 1.00 40.04 N
ATOM 21 C2 G B 109 36.025 -56.874 -56.184 1.00 40.17 C
ATOM 22 N2 G B 109 36.683 -57.905 -56.720 1.00 41.29 N
ATOM 23 N3 G B 109 36.539 -56.159 -55.184 1.00 38.76 N
ATOM 24 C4 G B 109 35.686 -55.180 -54.820 1.00 42.26 C
ATOM 25 P A B 110 38.702 -49.427 -52.963 1.00 43.26 P
ATOM 26 OP1 A B 110 39.530 -48.798 -51.904 1.00 33.35 O
ATOM 27 OP2 A B 110 37.219 -49.158 -52.989 1.00 29.71 O
ATOM 28 O5' A B 110 39.337 -49.126 -54.379 1.00 31.95 O
TER
Atoms:
OP1: (33.821,-37.888,-45.075)
OP2: (33.935,-39.023,-47.404)
C3': (33.621,-42.872,-43.809)
C1': (31.933,-43.929,-45.070)
C5': (32.635,-40.523,-44.114)
O6: (33.442,-46.278,-50.293)
O4': (31.634,-42.561,-44.953)
C8: (32.709,-43.311,-47.433)
C2: (32.364,-47.616,-47.163)
C6: (33.060,-46.343,-49.121)
C5: (32.854,-45.239,-48.290)
C4: (32.445,-45.436,-47.005)
P: (33.310,-38.908,-46.032)
C4': (32.393,-41.990,-43.860)
C2': (33.019,-44.248,-44.042)
O2': (32.382,-44.702,-42.861)
N1: (32.780,-47.550,-48.472)
N2: (32.154,-48.848,-46.654)
N3: (32.182,-46.569,-46.375)
N7: (33.027,-43.896,-48.575)
N9: (32.359,-44.203,-46.448)
O5': (33.296,-40.327,-45.344)
O3': (34.326,-42.759,-42.586)
OP2: (33.935,-39.023,-47.404)
C3': (33.621,-42.872,-43.809)
C1': (31.933,-43.929,-45.070)
C5': (32.635,-40.523,-44.114)
O6: (33.442,-46.278,-50.293)
O4': (31.634,-42.561,-44.953)
C8: (32.709,-43.311,-47.433)
C2: (32.364,-47.616,-47.163)
C6: (33.060,-46.343,-49.121)
C5: (32.854,-45.239,-48.290)
C4: (32.445,-45.436,-47.005)
P: (33.310,-38.908,-46.032)
C4': (32.393,-41.990,-43.860)
C2': (33.019,-44.248,-44.042)
O2': (32.382,-44.702,-42.861)
N1: (32.780,-47.550,-48.472)
N2: (32.154,-48.848,-46.654)
N3: (32.182,-46.569,-46.375)
N7: (33.027,-43.896,-48.575)
N9: (32.359,-44.203,-46.448)
O5': (33.296,-40.327,-45.344)
O3': (34.326,-42.759,-42.586)
OP1: (34.335,-49.252,-50.074)
OP2: (32.959,-49.824,-52.161)
C3': (37.778,-51.854,-52.935)
C1': (36.980,-54.066,-52.896)
C5': (36.245,-51.096,-51.040)
O6: (32.881,-55.481,-56.964)
O4': (36.470,-53.390,-51.773)
C8: (34.739,-53.449,-53.836)
C2: (36.025,-56.874,-56.184)
C6: (33.947,-55.636,-56.397)
C5: (34.445,-54.878,-55.346)
C4: (35.686,-55.180,-54.820)
P: (33.759,-50.280,-51.006)
C4': (37.175,-52.147,-51.586)
C2': (38.124,-53.237,-53.456)
O2': (39.339,-53.691,-52.874)
N1: (34.817,-56.638,-56.777)
N2: (36.683,-57.905,-56.720)
N3: (36.539,-56.159,-55.184)
N7: (33.862,-53.794,-54.737)
N9: (35.878,-54.227,-53.850)
O5': (34.912,-51.264,-51.508)
O3': (38.893,-51.006,-52.836)
OP2: (32.959,-49.824,-52.161)
C3': (37.778,-51.854,-52.935)
C1': (36.980,-54.066,-52.896)
C5': (36.245,-51.096,-51.040)
O6: (32.881,-55.481,-56.964)
O4': (36.470,-53.390,-51.773)
C8: (34.739,-53.449,-53.836)
C2: (36.025,-56.874,-56.184)
C6: (33.947,-55.636,-56.397)
C5: (34.445,-54.878,-55.346)
C4: (35.686,-55.180,-54.820)
P: (33.759,-50.280,-51.006)
C4': (37.175,-52.147,-51.586)
C2': (38.124,-53.237,-53.456)
O2': (39.339,-53.691,-52.874)
N1: (34.817,-56.638,-56.777)
N2: (36.683,-57.905,-56.720)
N3: (36.539,-56.159,-55.184)
N7: (33.862,-53.794,-54.737)
N9: (35.878,-54.227,-53.850)
O5': (34.912,-51.264,-51.508)
O3': (38.893,-51.006,-52.836)
Image (generated by PyMOL):