ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1608:A1908

Extra

PDB:
ATOM 1 O3' G A1607 64.449 -40.704 34.726 1.00 37.73 O
ATOM 2 P G A1608 63.844 -39.478 33.901 1.00 38.15 P
ATOM 3 OP1 G A1608 64.692 -38.292 34.153 1.00 42.11 O
ATOM 4 OP2 G A1608 62.419 -39.408 34.248 1.00 47.97 O
ATOM 5 O5' G A1608 64.013 -39.957 32.390 1.00 51.57 O
ATOM 6 C5' G A1608 65.285 -39.933 31.730 1.00 43.46 C
ATOM 7 C4' G A1608 65.125 -39.979 30.229 1.00 41.27 C
ATOM 8 O4' G A1608 64.316 -41.135 29.888 1.00 46.74 O
ATOM 9 C3' G A1608 64.394 -38.783 29.636 1.00 50.42 C
ATOM 10 O3' G A1608 64.798 -38.596 28.283 1.00 40.78 O
ATOM 11 C2' G A1608 62.942 -39.242 29.685 1.00 47.47 C
ATOM 12 O2' G A1608 62.071 -38.565 28.812 1.00 56.94 O
ATOM 13 C1' G A1608 63.080 -40.713 29.325 1.00 38.85 C
ATOM 14 N9 G A1608 62.023 -41.548 29.877 1.00 40.97 N
ATOM 15 C8 G A1608 61.529 -41.489 31.158 1.00 54.16 C
ATOM 16 N7 G A1608 60.577 -42.345 31.391 1.00 50.46 N
ATOM 17 C5 G A1608 60.438 -43.010 30.186 1.00 52.45 C
ATOM 18 C6 G A1608 59.568 -44.057 29.813 1.00 50.76 C
ATOM 19 O6 G A1608 58.720 -44.626 30.486 1.00 60.07 O
ATOM 20 N1 G A1608 59.756 -44.457 28.505 1.00 51.32 N
ATOM 21 C2 G A1608 60.661 -43.901 27.650 1.00 61.57 C
ATOM 22 N2 G A1608 60.674 -44.421 26.418 1.00 59.39 N
ATOM 23 N3 G A1608 61.487 -42.914 27.975 1.00 65.60 N
ATOM 24 C4 G A1608 61.321 -42.527 29.249 1.00 52.77 C
ATOM 25 P A A1609 66.265 -38.032 27.948 1.00 39.49 P
ATOM 26 OP1 A A1609 67.099 -38.302 29.118 1.00 42.98 O
ATOM 27 OP2 A A1609 66.108 -36.625 27.506 1.00 63.06 O
ATOM 28 O5' A A1609 66.730 -38.940 26.715 1.00 40.38 O
TER

ATOM 1 O3' U B1907 56.604 -45.624 25.371 1.00 36.92 O
ATOM 2 P G B1908 57.159 -46.838 26.223 1.00 37.03 P
ATOM 3 OP1 G B1908 56.001 -47.706 26.550 1.00 56.89 O
ATOM 4 OP2 G B1908 57.971 -46.277 27.323 1.00 57.62 O
ATOM 5 O5' G B1908 58.099 -47.574 25.197 1.00 39.94 O
ATOM 6 C5' G B1908 59.217 -46.909 24.643 1.00 52.70 C
ATOM 7 C4' G B1908 59.765 -47.694 23.515 1.00 40.88 C
ATOM 8 O4' G B1908 60.492 -48.803 24.079 1.00 39.86 O
ATOM 9 C3' G B1908 58.695 -48.267 22.644 1.00 40.45 C
ATOM 10 O3' G B1908 58.952 -48.009 21.215 1.00 44.67 O
ATOM 11 C2' G B1908 58.552 -49.754 23.101 1.00 35.91 C
ATOM 12 O2' G B1908 58.408 -50.706 22.084 1.00 73.14 O
ATOM 13 C1' G B1908 59.797 -50.024 23.941 1.00 37.77 C
ATOM 14 N9 G B1908 59.513 -50.505 25.308 1.00 48.87 N
ATOM 15 C8 G B1908 58.359 -50.259 26.003 1.00 52.52 C
ATOM 16 N7 G B1908 58.355 -50.730 27.237 1.00 49.82 N
ATOM 17 C5 G B1908 59.604 -51.328 27.397 1.00 41.93 C
ATOM 18 C6 G B1908 60.173 -51.998 28.520 1.00 42.86 C
ATOM 19 O6 G B1908 59.705 -52.199 29.641 1.00 50.77 O
ATOM 20 N1 G B1908 61.444 -52.471 28.299 1.00 38.28 N
ATOM 21 C2 G B1908 62.121 -52.287 27.149 1.00 41.79 C
ATOM 22 N2 G B1908 63.355 -52.802 27.160 1.00 37.37 N
ATOM 23 N3 G B1908 61.615 -51.651 26.087 1.00 51.35 N
ATOM 24 C4 G B1908 60.342 -51.182 26.241 1.00 46.12 C
ATOM 25 P U B1909 59.919 -48.883 20.260 1.00 39.75 P
ATOM 26 OP1 U B1909 59.261 -48.973 18.955 1.00 38.26 O
ATOM 27 OP2 U B1909 60.248 -50.143 20.977 1.00 57.25 O
ATOM 28 O5' U B1909 61.223 -47.981 20.097 1.00 48.70 O
TER

Atoms:
OP1: (64.692,-38.292,34.153)
OP2: (62.419,-39.408,34.248)
C3': (64.394,-38.783,29.636)
C1': (63.080,-40.713,29.325)
C5': (65.285,-39.933,31.730)
O6: (58.720,-44.626,30.486)
O4': (64.316,-41.135,29.888)
C8: (61.529,-41.489,31.158)
C2: (60.661,-43.901,27.650)
C6: (59.568,-44.057,29.813)
C5: (60.438,-43.010,30.186)
C4: (61.321,-42.527,29.249)
P: (63.844,-39.478,33.901)
C4': (65.125,-39.979,30.229)
C2': (62.942,-39.242,29.685)
O2': (62.071,-38.565,28.812)
N1: (59.756,-44.457,28.505)
N2: (60.674,-44.421,26.418)
N3: (61.487,-42.914,27.975)
N7: (60.577,-42.345,31.391)
N9: (62.023,-41.548,29.877)
O5': (64.013,-39.957,32.390)
O3': (64.798,-38.596,28.283)
OP1: (56.001,-47.706,26.550)
OP2: (57.971,-46.277,27.323)
C3': (58.695,-48.267,22.644)
C1': (59.797,-50.024,23.941)
C5': (59.217,-46.909,24.643)
O6: (59.705,-52.199,29.641)
O4': (60.492,-48.803,24.079)
C8: (58.359,-50.259,26.003)
C2: (62.121,-52.287,27.149)
C6: (60.173,-51.998,28.520)
C5: (59.604,-51.328,27.397)
C4: (60.342,-51.182,26.241)
P: (57.159,-46.838,26.223)
C4': (59.765,-47.694,23.515)
C2': (58.552,-49.754,23.101)
O2': (58.408,-50.706,22.084)
N1: (61.444,-52.471,28.299)
N2: (63.355,-52.802,27.160)
N3: (61.615,-51.651,26.087)
N7: (58.355,-50.730,27.237)
N9: (59.513,-50.505,25.308)
O5': (58.099,-47.574,25.197)
O3': (58.952,-48.009,21.215)
Image (generated by PyMOL):
PyMOL image
show in jmol