Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A123:A116
Extra
PDB:
ATOM 1 O3' G A 122 -28.701 -37.458 47.074 1.00 0.01 O
ATOM 2 P G A 123 -30.002 -38.246 46.537 1.00 0.01 P
ATOM 3 OP1 G A 123 -30.665 -37.361 45.574 1.00 0.01 O
ATOM 4 OP2 G A 123 -30.755 -38.714 47.705 1.00 0.01 O
ATOM 5 O5' G A 123 -29.392 -39.494 45.795 1.00 0.01 O
ATOM 6 C5' G A 123 -28.543 -39.332 44.681 1.00 0.01 C
ATOM 7 C4' G A 123 -28.282 -40.655 44.013 1.00 0.01 C
ATOM 8 O4' G A 123 -27.258 -41.367 44.735 1.00 0.01 O
ATOM 9 C3' G A 123 -29.460 -41.618 43.968 1.00 0.01 C
ATOM 10 O3' G A 123 -30.288 -41.367 42.844 1.00 0.01 O
ATOM 11 C2' G A 123 -28.770 -42.961 43.925 1.00 0.01 C
ATOM 12 O2' G A 123 -28.252 -43.193 42.645 1.00 0.01 O
ATOM 13 C1' G A 123 -27.597 -42.721 44.840 1.00 0.01 C
ATOM 14 N9 G A 123 -27.929 -42.986 46.221 1.00 0.02 N
ATOM 15 C8 G A 123 -28.292 -42.044 47.129 1.00 0.02 C
ATOM 16 N7 G A 123 -28.523 -42.571 48.288 1.00 0.02 N
ATOM 17 C5 G A 123 -28.286 -43.941 48.099 1.00 0.02 C
ATOM 18 C6 G A 123 -28.381 -45.035 48.991 1.00 0.02 C
ATOM 19 O6 G A 123 -28.695 -45.033 50.182 1.00 0.02 O
ATOM 20 N1 G A 123 -28.058 -46.229 48.387 1.00 0.02 N
ATOM 21 C2 G A 123 -27.688 -46.342 47.094 1.00 0.02 C
ATOM 22 N2 G A 123 -27.417 -47.584 46.723 1.00 0.02 N
ATOM 23 N3 G A 123 -27.593 -45.350 46.235 1.00 0.02 N
ATOM 24 C4 G A 123 -27.904 -44.193 46.815 1.00 0.02 C
ATOM 25 P A A 124 -31.696 -42.098 42.633 1.00 0.01 P
ATOM 26 OP1 A A 124 -32.528 -41.165 41.878 1.00 0.01 O
ATOM 27 OP2 A A 124 -32.172 -42.576 43.943 1.00 0.01 O
ATOM 28 O5' A A 124 -31.312 -43.319 41.720 1.00 0.01 O
TER
ATOM 1 O3' C B 115 -28.321 -50.557 49.672 1.00 0.01 O
ATOM 2 P G B 116 -29.043 -49.549 50.700 1.00 0.01 P
ATOM 3 OP1 G B 116 -29.404 -48.352 49.922 1.00 0.01 O
ATOM 4 OP2 G B 116 -28.163 -49.392 51.868 1.00 0.01 O
ATOM 5 O5' G B 116 -30.351 -50.342 51.133 1.00 0.01 O
ATOM 6 C5' G B 116 -31.326 -50.707 50.185 1.00 0.01 C
ATOM 7 C4' G B 116 -32.308 -51.672 50.765 1.00 0.01 C
ATOM 8 O4' G B 116 -31.641 -52.903 51.083 1.00 0.01 O
ATOM 9 C3' G B 116 -32.944 -51.253 52.065 1.00 0.01 C
ATOM 10 O3' G B 116 -34.041 -50.406 51.884 1.00 0.01 O
ATOM 11 C2' G B 116 -33.323 -52.571 52.692 1.00 0.01 C
ATOM 12 O2' G B 116 -34.525 -53.068 52.139 1.00 0.01 O
ATOM 13 C1' G B 116 -32.177 -53.446 52.256 1.00 0.01 C
ATOM 14 N9 G B 116 -31.132 -53.466 53.267 1.00 0.02 N
ATOM 15 C8 G B 116 -30.147 -52.557 53.486 1.00 0.02 C
ATOM 16 N7 G B 116 -29.387 -52.891 54.506 1.00 0.02 N
ATOM 17 C5 G B 116 -29.925 -54.093 54.975 1.00 0.02 C
ATOM 18 C6 G B 116 -29.560 -54.967 56.034 1.00 0.02 C
ATOM 19 O6 G B 116 -28.647 -54.881 56.844 1.00 0.02 O
ATOM 20 N1 G B 116 -30.384 -56.051 56.134 1.00 0.02 N
ATOM 21 C2 G B 116 -31.432 -56.284 55.328 1.00 0.02 C
ATOM 22 N2 G B 116 -32.114 -57.383 55.585 1.00 0.02 N
ATOM 23 N3 G B 116 -31.797 -55.526 54.334 1.00 0.02 N
ATOM 24 C4 G B 116 -31.009 -54.444 54.216 1.00 0.02 C
ATOM 25 P A B 117 -33.975 -48.932 52.434 1.00 0.01 P
ATOM 26 OP1 A B 117 -34.995 -48.159 51.707 1.00 0.01 O
ATOM 27 OP2 A B 117 -32.570 -48.538 52.334 1.00 0.01 O
ATOM 28 O5' A B 117 -34.396 -49.071 53.948 1.00 0.01 O
TER
ATOM 2 P G A 123 -30.002 -38.246 46.537 1.00 0.01 P
ATOM 3 OP1 G A 123 -30.665 -37.361 45.574 1.00 0.01 O
ATOM 4 OP2 G A 123 -30.755 -38.714 47.705 1.00 0.01 O
ATOM 5 O5' G A 123 -29.392 -39.494 45.795 1.00 0.01 O
ATOM 6 C5' G A 123 -28.543 -39.332 44.681 1.00 0.01 C
ATOM 7 C4' G A 123 -28.282 -40.655 44.013 1.00 0.01 C
ATOM 8 O4' G A 123 -27.258 -41.367 44.735 1.00 0.01 O
ATOM 9 C3' G A 123 -29.460 -41.618 43.968 1.00 0.01 C
ATOM 10 O3' G A 123 -30.288 -41.367 42.844 1.00 0.01 O
ATOM 11 C2' G A 123 -28.770 -42.961 43.925 1.00 0.01 C
ATOM 12 O2' G A 123 -28.252 -43.193 42.645 1.00 0.01 O
ATOM 13 C1' G A 123 -27.597 -42.721 44.840 1.00 0.01 C
ATOM 14 N9 G A 123 -27.929 -42.986 46.221 1.00 0.02 N
ATOM 15 C8 G A 123 -28.292 -42.044 47.129 1.00 0.02 C
ATOM 16 N7 G A 123 -28.523 -42.571 48.288 1.00 0.02 N
ATOM 17 C5 G A 123 -28.286 -43.941 48.099 1.00 0.02 C
ATOM 18 C6 G A 123 -28.381 -45.035 48.991 1.00 0.02 C
ATOM 19 O6 G A 123 -28.695 -45.033 50.182 1.00 0.02 O
ATOM 20 N1 G A 123 -28.058 -46.229 48.387 1.00 0.02 N
ATOM 21 C2 G A 123 -27.688 -46.342 47.094 1.00 0.02 C
ATOM 22 N2 G A 123 -27.417 -47.584 46.723 1.00 0.02 N
ATOM 23 N3 G A 123 -27.593 -45.350 46.235 1.00 0.02 N
ATOM 24 C4 G A 123 -27.904 -44.193 46.815 1.00 0.02 C
ATOM 25 P A A 124 -31.696 -42.098 42.633 1.00 0.01 P
ATOM 26 OP1 A A 124 -32.528 -41.165 41.878 1.00 0.01 O
ATOM 27 OP2 A A 124 -32.172 -42.576 43.943 1.00 0.01 O
ATOM 28 O5' A A 124 -31.312 -43.319 41.720 1.00 0.01 O
TER
ATOM 1 O3' C B 115 -28.321 -50.557 49.672 1.00 0.01 O
ATOM 2 P G B 116 -29.043 -49.549 50.700 1.00 0.01 P
ATOM 3 OP1 G B 116 -29.404 -48.352 49.922 1.00 0.01 O
ATOM 4 OP2 G B 116 -28.163 -49.392 51.868 1.00 0.01 O
ATOM 5 O5' G B 116 -30.351 -50.342 51.133 1.00 0.01 O
ATOM 6 C5' G B 116 -31.326 -50.707 50.185 1.00 0.01 C
ATOM 7 C4' G B 116 -32.308 -51.672 50.765 1.00 0.01 C
ATOM 8 O4' G B 116 -31.641 -52.903 51.083 1.00 0.01 O
ATOM 9 C3' G B 116 -32.944 -51.253 52.065 1.00 0.01 C
ATOM 10 O3' G B 116 -34.041 -50.406 51.884 1.00 0.01 O
ATOM 11 C2' G B 116 -33.323 -52.571 52.692 1.00 0.01 C
ATOM 12 O2' G B 116 -34.525 -53.068 52.139 1.00 0.01 O
ATOM 13 C1' G B 116 -32.177 -53.446 52.256 1.00 0.01 C
ATOM 14 N9 G B 116 -31.132 -53.466 53.267 1.00 0.02 N
ATOM 15 C8 G B 116 -30.147 -52.557 53.486 1.00 0.02 C
ATOM 16 N7 G B 116 -29.387 -52.891 54.506 1.00 0.02 N
ATOM 17 C5 G B 116 -29.925 -54.093 54.975 1.00 0.02 C
ATOM 18 C6 G B 116 -29.560 -54.967 56.034 1.00 0.02 C
ATOM 19 O6 G B 116 -28.647 -54.881 56.844 1.00 0.02 O
ATOM 20 N1 G B 116 -30.384 -56.051 56.134 1.00 0.02 N
ATOM 21 C2 G B 116 -31.432 -56.284 55.328 1.00 0.02 C
ATOM 22 N2 G B 116 -32.114 -57.383 55.585 1.00 0.02 N
ATOM 23 N3 G B 116 -31.797 -55.526 54.334 1.00 0.02 N
ATOM 24 C4 G B 116 -31.009 -54.444 54.216 1.00 0.02 C
ATOM 25 P A B 117 -33.975 -48.932 52.434 1.00 0.01 P
ATOM 26 OP1 A B 117 -34.995 -48.159 51.707 1.00 0.01 O
ATOM 27 OP2 A B 117 -32.570 -48.538 52.334 1.00 0.01 O
ATOM 28 O5' A B 117 -34.396 -49.071 53.948 1.00 0.01 O
TER
Atoms:
OP1: (-30.665,-37.361,45.574)
OP2: (-30.755,-38.714,47.705)
C3': (-29.460,-41.618,43.968)
C1': (-27.597,-42.721,44.840)
C5': (-28.543,-39.332,44.681)
O6: (-28.695,-45.033,50.182)
O4': (-27.258,-41.367,44.735)
C8: (-28.292,-42.044,47.129)
C2: (-27.688,-46.342,47.094)
C6: (-28.381,-45.035,48.991)
C5: (-28.286,-43.941,48.099)
C4: (-27.904,-44.193,46.815)
P: (-30.002,-38.246,46.537)
C4': (-28.282,-40.655,44.013)
C2': (-28.770,-42.961,43.925)
O2': (-28.252,-43.193,42.645)
N1: (-28.058,-46.229,48.387)
N2: (-27.417,-47.584,46.723)
N3: (-27.593,-45.350,46.235)
N7: (-28.523,-42.571,48.288)
N9: (-27.929,-42.986,46.221)
O5': (-29.392,-39.494,45.795)
O3': (-30.288,-41.367,42.844)
OP2: (-30.755,-38.714,47.705)
C3': (-29.460,-41.618,43.968)
C1': (-27.597,-42.721,44.840)
C5': (-28.543,-39.332,44.681)
O6: (-28.695,-45.033,50.182)
O4': (-27.258,-41.367,44.735)
C8: (-28.292,-42.044,47.129)
C2: (-27.688,-46.342,47.094)
C6: (-28.381,-45.035,48.991)
C5: (-28.286,-43.941,48.099)
C4: (-27.904,-44.193,46.815)
P: (-30.002,-38.246,46.537)
C4': (-28.282,-40.655,44.013)
C2': (-28.770,-42.961,43.925)
O2': (-28.252,-43.193,42.645)
N1: (-28.058,-46.229,48.387)
N2: (-27.417,-47.584,46.723)
N3: (-27.593,-45.350,46.235)
N7: (-28.523,-42.571,48.288)
N9: (-27.929,-42.986,46.221)
O5': (-29.392,-39.494,45.795)
O3': (-30.288,-41.367,42.844)
OP1: (-29.404,-48.352,49.922)
OP2: (-28.163,-49.392,51.868)
C3': (-32.944,-51.253,52.065)
C1': (-32.177,-53.446,52.256)
C5': (-31.326,-50.707,50.185)
O6: (-28.647,-54.881,56.844)
O4': (-31.641,-52.903,51.083)
C8: (-30.147,-52.557,53.486)
C2: (-31.432,-56.284,55.328)
C6: (-29.560,-54.967,56.034)
C5: (-29.925,-54.093,54.975)
C4: (-31.009,-54.444,54.216)
P: (-29.043,-49.549,50.700)
C4': (-32.308,-51.672,50.765)
C2': (-33.323,-52.571,52.692)
O2': (-34.525,-53.068,52.139)
N1: (-30.384,-56.051,56.134)
N2: (-32.114,-57.383,55.585)
N3: (-31.797,-55.526,54.334)
N7: (-29.387,-52.891,54.506)
N9: (-31.132,-53.466,53.267)
O5': (-30.351,-50.342,51.133)
O3': (-34.041,-50.406,51.884)
OP2: (-28.163,-49.392,51.868)
C3': (-32.944,-51.253,52.065)
C1': (-32.177,-53.446,52.256)
C5': (-31.326,-50.707,50.185)
O6: (-28.647,-54.881,56.844)
O4': (-31.641,-52.903,51.083)
C8: (-30.147,-52.557,53.486)
C2: (-31.432,-56.284,55.328)
C6: (-29.560,-54.967,56.034)
C5: (-29.925,-54.093,54.975)
C4: (-31.009,-54.444,54.216)
P: (-29.043,-49.549,50.700)
C4': (-32.308,-51.672,50.765)
C2': (-33.323,-52.571,52.692)
O2': (-34.525,-53.068,52.139)
N1: (-30.384,-56.051,56.134)
N2: (-32.114,-57.383,55.585)
N3: (-31.797,-55.526,54.334)
N7: (-29.387,-52.891,54.506)
N9: (-31.132,-53.466,53.267)
O5': (-30.351,-50.342,51.133)
O3': (-34.041,-50.406,51.884)
Image (generated by PyMOL):