Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A387:A385
Extra
PDB:
ATOM 1 O3' U A 386 -91.073 -38.147 58.633 1.00 1.03 O
ATOM 2 P G A 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 3 OP1 G A 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 4 OP2 G A 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 5 O5' G A 387 -93.374 -39.037 58.204 1.00 5.00 O
ATOM 6 C5' G A 387 -93.667 -38.969 59.579 1.00 5.00 C
ATOM 7 C4' G A 387 -93.821 -40.346 60.128 1.00 5.00 C
ATOM 8 O4' G A 387 -92.536 -40.950 60.280 1.00 5.00 O
ATOM 9 C3' G A 387 -94.457 -40.466 61.478 1.00 5.00 C
ATOM 10 O3' G A 387 -95.874 -40.433 61.389 1.00 5.00 O
ATOM 11 C2' G A 387 -93.911 -41.802 61.995 1.00 5.00 C
ATOM 12 O2' G A 387 -94.753 -42.873 61.610 1.00 5.00 O
ATOM 13 C1' G A 387 -92.595 -41.948 61.242 1.00 5.00 C
ATOM 14 N9 G A 387 -91.423 -41.820 62.096 1.00 5.19 N
ATOM 15 C8 G A 387 -91.173 -40.887 63.048 1.00 5.19 C
ATOM 16 N7 G A 387 -90.001 -41.034 63.596 1.00 5.19 N
ATOM 17 C5 G A 387 -89.460 -42.114 62.937 1.00 5.19 C
ATOM 18 C6 G A 387 -88.216 -42.736 63.101 1.00 5.19 C
ATOM 19 O6 G A 387 -87.313 -42.431 63.894 1.00 5.19 O
ATOM 20 N1 G A 387 -88.065 -43.810 62.235 1.00 5.19 N
ATOM 21 C2 G A 387 -88.981 -44.225 61.321 1.00 5.19 C
ATOM 22 N2 G A 387 -88.625 -45.286 60.575 1.00 5.19 N
ATOM 23 N3 G A 387 -90.152 -43.642 61.177 1.00 5.19 N
ATOM 24 C4 G A 387 -90.317 -42.606 62.006 1.00 5.19 C
ATOM 25 P G A 388 -96.680 -39.106 61.794 1.00 6.01 P
ATOM 26 OP1 G A 388 -98.110 -39.322 61.438 1.00 6.01 O
ATOM 27 OP2 G A 388 -95.962 -37.961 61.198 1.00 6.01 O
ATOM 28 O5' G A 388 -96.503 -39.091 63.371 1.00 6.01 O
TER
ATOM 1 O3' C B 384 -85.628 -47.121 60.548 1.00 0.01 O
ATOM 2 P G B 385 -84.907 -45.705 60.667 1.00 0.01 P
ATOM 3 OP1 G B 385 -83.474 -45.926 60.457 1.00 0.01 O
ATOM 4 OP2 G B 385 -85.346 -45.106 61.928 1.00 0.01 O
ATOM 5 O5' G B 385 -85.519 -44.928 59.427 1.00 0.01 O
ATOM 6 C5' G B 385 -84.690 -44.194 58.549 1.00 0.01 C
ATOM 7 C4' G B 385 -85.384 -43.903 57.252 1.00 0.01 C
ATOM 8 O4' G B 385 -85.191 -45.023 56.368 1.00 0.01 O
ATOM 9 C3' G B 385 -86.896 -43.701 57.350 1.00 0.01 C
ATOM 10 O3' G B 385 -87.337 -42.765 56.354 1.00 0.01 O
ATOM 11 C2' G B 385 -87.431 -45.071 56.995 1.00 0.01 C
ATOM 12 O2' G B 385 -88.742 -45.051 56.498 1.00 0.01 O
ATOM 13 C1' G B 385 -86.444 -45.485 55.920 1.00 0.01 C
ATOM 14 N9 G B 385 -86.352 -46.938 55.660 1.00 0.01 N
ATOM 15 C8 G B 385 -85.935 -47.914 56.509 1.00 0.01 C
ATOM 16 N7 G B 385 -85.927 -49.081 55.970 1.00 0.01 N
ATOM 17 C5 G B 385 -86.353 -48.871 54.668 1.00 0.01 C
ATOM 18 C6 G B 385 -86.542 -49.788 53.592 1.00 0.01 C
ATOM 19 O6 G B 385 -86.374 -51.031 53.576 1.00 0.01 O
ATOM 20 N1 G B 385 -86.967 -49.134 52.450 1.00 0.01 N
ATOM 21 C2 G B 385 -87.192 -47.801 52.347 1.00 0.01 C
ATOM 22 N2 G B 385 -87.608 -47.350 51.149 1.00 0.01 N
ATOM 23 N3 G B 385 -87.020 -46.975 53.349 1.00 0.01 N
ATOM 24 C4 G B 385 -86.608 -47.562 54.466 1.00 0.01 C
ATOM 25 P U B 386 -87.214 -41.177 56.585 1.00 1.03 P
ATOM 26 OP1 U B 386 -87.988 -40.517 55.514 1.00 1.03 O
ATOM 27 OP2 U B 386 -85.778 -40.857 56.717 1.00 1.03 O
ATOM 28 O5' U B 386 -87.948 -40.985 57.960 1.00 1.03 O
TER
ATOM 2 P G A 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 3 OP1 G A 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 4 OP2 G A 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 5 O5' G A 387 -93.374 -39.037 58.204 1.00 5.00 O
ATOM 6 C5' G A 387 -93.667 -38.969 59.579 1.00 5.00 C
ATOM 7 C4' G A 387 -93.821 -40.346 60.128 1.00 5.00 C
ATOM 8 O4' G A 387 -92.536 -40.950 60.280 1.00 5.00 O
ATOM 9 C3' G A 387 -94.457 -40.466 61.478 1.00 5.00 C
ATOM 10 O3' G A 387 -95.874 -40.433 61.389 1.00 5.00 O
ATOM 11 C2' G A 387 -93.911 -41.802 61.995 1.00 5.00 C
ATOM 12 O2' G A 387 -94.753 -42.873 61.610 1.00 5.00 O
ATOM 13 C1' G A 387 -92.595 -41.948 61.242 1.00 5.00 C
ATOM 14 N9 G A 387 -91.423 -41.820 62.096 1.00 5.19 N
ATOM 15 C8 G A 387 -91.173 -40.887 63.048 1.00 5.19 C
ATOM 16 N7 G A 387 -90.001 -41.034 63.596 1.00 5.19 N
ATOM 17 C5 G A 387 -89.460 -42.114 62.937 1.00 5.19 C
ATOM 18 C6 G A 387 -88.216 -42.736 63.101 1.00 5.19 C
ATOM 19 O6 G A 387 -87.313 -42.431 63.894 1.00 5.19 O
ATOM 20 N1 G A 387 -88.065 -43.810 62.235 1.00 5.19 N
ATOM 21 C2 G A 387 -88.981 -44.225 61.321 1.00 5.19 C
ATOM 22 N2 G A 387 -88.625 -45.286 60.575 1.00 5.19 N
ATOM 23 N3 G A 387 -90.152 -43.642 61.177 1.00 5.19 N
ATOM 24 C4 G A 387 -90.317 -42.606 62.006 1.00 5.19 C
ATOM 25 P G A 388 -96.680 -39.106 61.794 1.00 6.01 P
ATOM 26 OP1 G A 388 -98.110 -39.322 61.438 1.00 6.01 O
ATOM 27 OP2 G A 388 -95.962 -37.961 61.198 1.00 6.01 O
ATOM 28 O5' G A 388 -96.503 -39.091 63.371 1.00 6.01 O
TER
ATOM 1 O3' C B 384 -85.628 -47.121 60.548 1.00 0.01 O
ATOM 2 P G B 385 -84.907 -45.705 60.667 1.00 0.01 P
ATOM 3 OP1 G B 385 -83.474 -45.926 60.457 1.00 0.01 O
ATOM 4 OP2 G B 385 -85.346 -45.106 61.928 1.00 0.01 O
ATOM 5 O5' G B 385 -85.519 -44.928 59.427 1.00 0.01 O
ATOM 6 C5' G B 385 -84.690 -44.194 58.549 1.00 0.01 C
ATOM 7 C4' G B 385 -85.384 -43.903 57.252 1.00 0.01 C
ATOM 8 O4' G B 385 -85.191 -45.023 56.368 1.00 0.01 O
ATOM 9 C3' G B 385 -86.896 -43.701 57.350 1.00 0.01 C
ATOM 10 O3' G B 385 -87.337 -42.765 56.354 1.00 0.01 O
ATOM 11 C2' G B 385 -87.431 -45.071 56.995 1.00 0.01 C
ATOM 12 O2' G B 385 -88.742 -45.051 56.498 1.00 0.01 O
ATOM 13 C1' G B 385 -86.444 -45.485 55.920 1.00 0.01 C
ATOM 14 N9 G B 385 -86.352 -46.938 55.660 1.00 0.01 N
ATOM 15 C8 G B 385 -85.935 -47.914 56.509 1.00 0.01 C
ATOM 16 N7 G B 385 -85.927 -49.081 55.970 1.00 0.01 N
ATOM 17 C5 G B 385 -86.353 -48.871 54.668 1.00 0.01 C
ATOM 18 C6 G B 385 -86.542 -49.788 53.592 1.00 0.01 C
ATOM 19 O6 G B 385 -86.374 -51.031 53.576 1.00 0.01 O
ATOM 20 N1 G B 385 -86.967 -49.134 52.450 1.00 0.01 N
ATOM 21 C2 G B 385 -87.192 -47.801 52.347 1.00 0.01 C
ATOM 22 N2 G B 385 -87.608 -47.350 51.149 1.00 0.01 N
ATOM 23 N3 G B 385 -87.020 -46.975 53.349 1.00 0.01 N
ATOM 24 C4 G B 385 -86.608 -47.562 54.466 1.00 0.01 C
ATOM 25 P U B 386 -87.214 -41.177 56.585 1.00 1.03 P
ATOM 26 OP1 U B 386 -87.988 -40.517 55.514 1.00 1.03 O
ATOM 27 OP2 U B 386 -85.778 -40.857 56.717 1.00 1.03 O
ATOM 28 O5' U B 386 -87.948 -40.985 57.960 1.00 1.03 O
TER
Atoms:
OP1: (-91.728,-38.820,56.354)
OP2: (-92.720,-36.752,57.467)
C3': (-94.457,-40.466,61.478)
C1': (-92.595,-41.948,61.242)
C5': (-93.667,-38.969,59.579)
O6: (-87.313,-42.431,63.894)
O4': (-92.536,-40.950,60.280)
C8: (-91.173,-40.887,63.048)
C2: (-88.981,-44.225,61.321)
C6: (-88.216,-42.736,63.101)
C5: (-89.460,-42.114,62.937)
C4: (-90.317,-42.606,62.006)
P: (-92.248,-38.146,57.556)
C4': (-93.821,-40.346,60.128)
C2': (-93.911,-41.802,61.995)
O2': (-94.753,-42.873,61.610)
N1: (-88.065,-43.810,62.235)
N2: (-88.625,-45.286,60.575)
N3: (-90.152,-43.642,61.177)
N7: (-90.001,-41.034,63.596)
N9: (-91.423,-41.820,62.096)
O5': (-93.374,-39.037,58.204)
O3': (-95.874,-40.433,61.389)
OP2: (-92.720,-36.752,57.467)
C3': (-94.457,-40.466,61.478)
C1': (-92.595,-41.948,61.242)
C5': (-93.667,-38.969,59.579)
O6: (-87.313,-42.431,63.894)
O4': (-92.536,-40.950,60.280)
C8: (-91.173,-40.887,63.048)
C2: (-88.981,-44.225,61.321)
C6: (-88.216,-42.736,63.101)
C5: (-89.460,-42.114,62.937)
C4: (-90.317,-42.606,62.006)
P: (-92.248,-38.146,57.556)
C4': (-93.821,-40.346,60.128)
C2': (-93.911,-41.802,61.995)
O2': (-94.753,-42.873,61.610)
N1: (-88.065,-43.810,62.235)
N2: (-88.625,-45.286,60.575)
N3: (-90.152,-43.642,61.177)
N7: (-90.001,-41.034,63.596)
N9: (-91.423,-41.820,62.096)
O5': (-93.374,-39.037,58.204)
O3': (-95.874,-40.433,61.389)
OP1: (-83.474,-45.926,60.457)
OP2: (-85.346,-45.106,61.928)
C3': (-86.896,-43.701,57.350)
C1': (-86.444,-45.485,55.920)
C5': (-84.690,-44.194,58.549)
O6: (-86.374,-51.031,53.576)
O4': (-85.191,-45.023,56.368)
C8: (-85.935,-47.914,56.509)
C2: (-87.192,-47.801,52.347)
C6: (-86.542,-49.788,53.592)
C5: (-86.353,-48.871,54.668)
C4: (-86.608,-47.562,54.466)
P: (-84.907,-45.705,60.667)
C4': (-85.384,-43.903,57.252)
C2': (-87.431,-45.071,56.995)
O2': (-88.742,-45.051,56.498)
N1: (-86.967,-49.134,52.450)
N2: (-87.608,-47.350,51.149)
N3: (-87.020,-46.975,53.349)
N7: (-85.927,-49.081,55.970)
N9: (-86.352,-46.938,55.660)
O5': (-85.519,-44.928,59.427)
O3': (-87.337,-42.765,56.354)
OP2: (-85.346,-45.106,61.928)
C3': (-86.896,-43.701,57.350)
C1': (-86.444,-45.485,55.920)
C5': (-84.690,-44.194,58.549)
O6: (-86.374,-51.031,53.576)
O4': (-85.191,-45.023,56.368)
C8: (-85.935,-47.914,56.509)
C2: (-87.192,-47.801,52.347)
C6: (-86.542,-49.788,53.592)
C5: (-86.353,-48.871,54.668)
C4: (-86.608,-47.562,54.466)
P: (-84.907,-45.705,60.667)
C4': (-85.384,-43.903,57.252)
C2': (-87.431,-45.071,56.995)
O2': (-88.742,-45.051,56.498)
N1: (-86.967,-49.134,52.450)
N2: (-87.608,-47.350,51.149)
N3: (-87.020,-46.975,53.349)
N7: (-85.927,-49.081,55.970)
N9: (-86.352,-46.938,55.660)
O5': (-85.519,-44.928,59.427)
O3': (-87.337,-42.765,56.354)
Image (generated by PyMOL):