Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A47:A176
Extra
PDB:
ATOM 1 O3' C A 46 -35.860 -61.319 65.700 1.00 0.26 O
ATOM 2 P G A 47 -35.212 -60.357 66.782 1.00 0.01 P
ATOM 3 OP1 G A 47 -33.824 -60.844 67.031 1.00 0.01 O
ATOM 4 OP2 G A 47 -36.165 -60.278 67.905 1.00 0.01 O
ATOM 5 O5' G A 47 -35.188 -58.981 66.020 1.00 0.01 O
ATOM 6 C5' G A 47 -34.795 -58.949 64.682 1.00 0.01 C
ATOM 7 C4' G A 47 -34.703 -57.556 64.167 1.00 0.01 C
ATOM 8 O4' G A 47 -35.968 -57.146 63.627 1.00 0.01 O
ATOM 9 C3' G A 47 -34.407 -56.475 65.164 1.00 0.01 C
ATOM 10 O3' G A 47 -33.068 -56.476 65.615 1.00 0.01 O
ATOM 11 C2' G A 47 -34.760 -55.273 64.335 1.00 0.01 C
ATOM 12 O2' G A 47 -33.824 -55.137 63.275 1.00 0.01 O
ATOM 13 C1' G A 47 -36.073 -55.753 63.738 1.00 0.01 C
ATOM 14 N9 G A 47 -37.214 -55.456 64.606 1.00 0.01 N
ATOM 15 C8 G A 47 -37.764 -56.385 65.448 1.00 0.01 C
ATOM 16 N7 G A 47 -38.773 -55.909 66.116 1.00 0.01 N
ATOM 17 C5 G A 47 -38.883 -54.604 65.683 1.00 0.01 C
ATOM 18 C6 G A 47 -39.804 -53.622 66.088 1.00 0.01 C
ATOM 19 O6 G A 47 -40.689 -53.787 66.922 1.00 0.01 O
ATOM 20 N1 G A 47 -39.626 -52.393 65.440 1.00 0.01 N
ATOM 21 C2 G A 47 -38.657 -52.163 64.496 1.00 0.01 C
ATOM 22 N2 G A 47 -38.654 -50.927 63.980 1.00 0.01 N
ATOM 23 N3 G A 47 -37.774 -53.096 64.106 1.00 0.01 N
ATOM 24 C4 G A 47 -37.941 -54.290 64.735 1.00 0.01 C
ATOM 25 P A A 48 -32.676 -55.719 66.985 1.00 7.91 P
ATOM 26 OP1 A A 48 -32.222 -56.756 67.934 1.00 7.91 O
ATOM 27 OP2 A A 48 -33.828 -54.856 67.365 1.00 7.91 O
ATOM 28 O5' A A 48 -31.456 -54.811 66.547 1.00 7.91 O
TER
ATOM 1 O3' A B 175 -41.686 -47.879 67.058 1.00 0.43 O
ATOM 2 P G B 176 -41.480 -49.217 66.215 1.00 0.01 P
ATOM 3 OP1 G B 176 -42.750 -49.992 66.298 1.00 0.01 O
ATOM 4 OP2 G B 176 -40.220 -49.844 66.691 1.00 0.01 O
ATOM 5 O5' G B 176 -41.287 -48.657 64.744 1.00 0.01 O
ATOM 6 C5' G B 176 -41.921 -47.462 64.327 1.00 0.01 C
ATOM 7 C4' G B 176 -41.110 -46.741 63.286 1.00 0.01 C
ATOM 8 O4' G B 176 -39.913 -46.195 63.907 1.00 0.01 O
ATOM 9 C3' G B 176 -40.613 -47.609 62.112 1.00 0.01 C
ATOM 10 O3' G B 176 -40.855 -46.964 60.857 1.00 0.01 O
ATOM 11 C2' G B 176 -39.112 -47.680 62.354 1.00 0.01 C
ATOM 12 O2' G B 176 -38.327 -47.832 61.199 1.00 0.01 O
ATOM 13 C1' G B 176 -38.860 -46.351 63.006 1.00 0.01 C
ATOM 14 N9 G B 176 -37.584 -46.287 63.682 1.00 0.09 N
ATOM 15 C8 G B 176 -36.605 -45.417 63.315 1.00 0.09 C
ATOM 16 N7 G B 176 -35.508 -45.591 63.978 1.00 0.09 N
ATOM 17 C5 G B 176 -35.767 -46.682 64.794 1.00 0.09 C
ATOM 18 C6 G B 176 -34.930 -47.341 65.745 1.00 0.09 C
ATOM 19 O6 G B 176 -33.749 -47.051 66.046 1.00 0.09 O
ATOM 20 N1 G B 176 -35.579 -48.407 66.367 1.00 0.09 N
ATOM 21 C2 G B 176 -36.865 -48.763 66.092 1.00 0.09 C
ATOM 22 N2 G B 176 -37.335 -49.812 66.764 1.00 0.09 N
ATOM 23 N3 G B 176 -37.650 -48.153 65.226 1.00 0.09 N
ATOM 24 C4 G B 176 -37.046 -47.134 64.604 1.00 0.09 C
ATOM 25 P G B 177 -41.962 -47.548 59.853 1.00 0.01 P
ATOM 26 OP1 G B 177 -42.238 -46.501 58.865 1.00 0.01 O
ATOM 27 OP2 G B 177 -43.062 -48.061 60.695 1.00 0.01 O
ATOM 28 O5' G B 177 -41.238 -48.745 59.150 1.00 0.01 O
TER
ATOM 2 P G A 47 -35.212 -60.357 66.782 1.00 0.01 P
ATOM 3 OP1 G A 47 -33.824 -60.844 67.031 1.00 0.01 O
ATOM 4 OP2 G A 47 -36.165 -60.278 67.905 1.00 0.01 O
ATOM 5 O5' G A 47 -35.188 -58.981 66.020 1.00 0.01 O
ATOM 6 C5' G A 47 -34.795 -58.949 64.682 1.00 0.01 C
ATOM 7 C4' G A 47 -34.703 -57.556 64.167 1.00 0.01 C
ATOM 8 O4' G A 47 -35.968 -57.146 63.627 1.00 0.01 O
ATOM 9 C3' G A 47 -34.407 -56.475 65.164 1.00 0.01 C
ATOM 10 O3' G A 47 -33.068 -56.476 65.615 1.00 0.01 O
ATOM 11 C2' G A 47 -34.760 -55.273 64.335 1.00 0.01 C
ATOM 12 O2' G A 47 -33.824 -55.137 63.275 1.00 0.01 O
ATOM 13 C1' G A 47 -36.073 -55.753 63.738 1.00 0.01 C
ATOM 14 N9 G A 47 -37.214 -55.456 64.606 1.00 0.01 N
ATOM 15 C8 G A 47 -37.764 -56.385 65.448 1.00 0.01 C
ATOM 16 N7 G A 47 -38.773 -55.909 66.116 1.00 0.01 N
ATOM 17 C5 G A 47 -38.883 -54.604 65.683 1.00 0.01 C
ATOM 18 C6 G A 47 -39.804 -53.622 66.088 1.00 0.01 C
ATOM 19 O6 G A 47 -40.689 -53.787 66.922 1.00 0.01 O
ATOM 20 N1 G A 47 -39.626 -52.393 65.440 1.00 0.01 N
ATOM 21 C2 G A 47 -38.657 -52.163 64.496 1.00 0.01 C
ATOM 22 N2 G A 47 -38.654 -50.927 63.980 1.00 0.01 N
ATOM 23 N3 G A 47 -37.774 -53.096 64.106 1.00 0.01 N
ATOM 24 C4 G A 47 -37.941 -54.290 64.735 1.00 0.01 C
ATOM 25 P A A 48 -32.676 -55.719 66.985 1.00 7.91 P
ATOM 26 OP1 A A 48 -32.222 -56.756 67.934 1.00 7.91 O
ATOM 27 OP2 A A 48 -33.828 -54.856 67.365 1.00 7.91 O
ATOM 28 O5' A A 48 -31.456 -54.811 66.547 1.00 7.91 O
TER
ATOM 1 O3' A B 175 -41.686 -47.879 67.058 1.00 0.43 O
ATOM 2 P G B 176 -41.480 -49.217 66.215 1.00 0.01 P
ATOM 3 OP1 G B 176 -42.750 -49.992 66.298 1.00 0.01 O
ATOM 4 OP2 G B 176 -40.220 -49.844 66.691 1.00 0.01 O
ATOM 5 O5' G B 176 -41.287 -48.657 64.744 1.00 0.01 O
ATOM 6 C5' G B 176 -41.921 -47.462 64.327 1.00 0.01 C
ATOM 7 C4' G B 176 -41.110 -46.741 63.286 1.00 0.01 C
ATOM 8 O4' G B 176 -39.913 -46.195 63.907 1.00 0.01 O
ATOM 9 C3' G B 176 -40.613 -47.609 62.112 1.00 0.01 C
ATOM 10 O3' G B 176 -40.855 -46.964 60.857 1.00 0.01 O
ATOM 11 C2' G B 176 -39.112 -47.680 62.354 1.00 0.01 C
ATOM 12 O2' G B 176 -38.327 -47.832 61.199 1.00 0.01 O
ATOM 13 C1' G B 176 -38.860 -46.351 63.006 1.00 0.01 C
ATOM 14 N9 G B 176 -37.584 -46.287 63.682 1.00 0.09 N
ATOM 15 C8 G B 176 -36.605 -45.417 63.315 1.00 0.09 C
ATOM 16 N7 G B 176 -35.508 -45.591 63.978 1.00 0.09 N
ATOM 17 C5 G B 176 -35.767 -46.682 64.794 1.00 0.09 C
ATOM 18 C6 G B 176 -34.930 -47.341 65.745 1.00 0.09 C
ATOM 19 O6 G B 176 -33.749 -47.051 66.046 1.00 0.09 O
ATOM 20 N1 G B 176 -35.579 -48.407 66.367 1.00 0.09 N
ATOM 21 C2 G B 176 -36.865 -48.763 66.092 1.00 0.09 C
ATOM 22 N2 G B 176 -37.335 -49.812 66.764 1.00 0.09 N
ATOM 23 N3 G B 176 -37.650 -48.153 65.226 1.00 0.09 N
ATOM 24 C4 G B 176 -37.046 -47.134 64.604 1.00 0.09 C
ATOM 25 P G B 177 -41.962 -47.548 59.853 1.00 0.01 P
ATOM 26 OP1 G B 177 -42.238 -46.501 58.865 1.00 0.01 O
ATOM 27 OP2 G B 177 -43.062 -48.061 60.695 1.00 0.01 O
ATOM 28 O5' G B 177 -41.238 -48.745 59.150 1.00 0.01 O
TER
Atoms:
OP1: (-33.824,-60.844,67.031)
OP2: (-36.165,-60.278,67.905)
C3': (-34.407,-56.475,65.164)
C1': (-36.073,-55.753,63.738)
C5': (-34.795,-58.949,64.682)
O6: (-40.689,-53.787,66.922)
O4': (-35.968,-57.146,63.627)
C8: (-37.764,-56.385,65.448)
C2: (-38.657,-52.163,64.496)
C6: (-39.804,-53.622,66.088)
C5: (-38.883,-54.604,65.683)
C4: (-37.941,-54.290,64.735)
P: (-35.212,-60.357,66.782)
C4': (-34.703,-57.556,64.167)
C2': (-34.760,-55.273,64.335)
O2': (-33.824,-55.137,63.275)
N1: (-39.626,-52.393,65.440)
N2: (-38.654,-50.927,63.980)
N3: (-37.774,-53.096,64.106)
N7: (-38.773,-55.909,66.116)
N9: (-37.214,-55.456,64.606)
O5': (-35.188,-58.981,66.020)
O3': (-33.068,-56.476,65.615)
OP2: (-36.165,-60.278,67.905)
C3': (-34.407,-56.475,65.164)
C1': (-36.073,-55.753,63.738)
C5': (-34.795,-58.949,64.682)
O6: (-40.689,-53.787,66.922)
O4': (-35.968,-57.146,63.627)
C8: (-37.764,-56.385,65.448)
C2: (-38.657,-52.163,64.496)
C6: (-39.804,-53.622,66.088)
C5: (-38.883,-54.604,65.683)
C4: (-37.941,-54.290,64.735)
P: (-35.212,-60.357,66.782)
C4': (-34.703,-57.556,64.167)
C2': (-34.760,-55.273,64.335)
O2': (-33.824,-55.137,63.275)
N1: (-39.626,-52.393,65.440)
N2: (-38.654,-50.927,63.980)
N3: (-37.774,-53.096,64.106)
N7: (-38.773,-55.909,66.116)
N9: (-37.214,-55.456,64.606)
O5': (-35.188,-58.981,66.020)
O3': (-33.068,-56.476,65.615)
OP1: (-42.750,-49.992,66.298)
OP2: (-40.220,-49.844,66.691)
C3': (-40.613,-47.609,62.112)
C1': (-38.860,-46.351,63.006)
C5': (-41.921,-47.462,64.327)
O6: (-33.749,-47.051,66.046)
O4': (-39.913,-46.195,63.907)
C8: (-36.605,-45.417,63.315)
C2: (-36.865,-48.763,66.092)
C6: (-34.930,-47.341,65.745)
C5: (-35.767,-46.682,64.794)
C4: (-37.046,-47.134,64.604)
P: (-41.480,-49.217,66.215)
C4': (-41.110,-46.741,63.286)
C2': (-39.112,-47.680,62.354)
O2': (-38.327,-47.832,61.199)
N1: (-35.579,-48.407,66.367)
N2: (-37.335,-49.812,66.764)
N3: (-37.650,-48.153,65.226)
N7: (-35.508,-45.591,63.978)
N9: (-37.584,-46.287,63.682)
O5': (-41.287,-48.657,64.744)
O3': (-40.855,-46.964,60.857)
OP2: (-40.220,-49.844,66.691)
C3': (-40.613,-47.609,62.112)
C1': (-38.860,-46.351,63.006)
C5': (-41.921,-47.462,64.327)
O6: (-33.749,-47.051,66.046)
O4': (-39.913,-46.195,63.907)
C8: (-36.605,-45.417,63.315)
C2: (-36.865,-48.763,66.092)
C6: (-34.930,-47.341,65.745)
C5: (-35.767,-46.682,64.794)
C4: (-37.046,-47.134,64.604)
P: (-41.480,-49.217,66.215)
C4': (-41.110,-46.741,63.286)
C2': (-39.112,-47.680,62.354)
O2': (-38.327,-47.832,61.199)
N1: (-35.579,-48.407,66.367)
N2: (-37.335,-49.812,66.764)
N3: (-37.650,-48.153,65.226)
N7: (-35.508,-45.591,63.978)
N9: (-37.584,-46.287,63.682)
O5': (-41.287,-48.657,64.744)
O3': (-40.855,-46.964,60.857)
Image (generated by PyMOL):