Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1852:12221
Extra
PDB:
ATOM 1 O3' G A 851 30.088 -7.065 101.916 1.00 33.57 O
ATOM 2 P G A 852 29.837 -8.646 102.059 1.00 36.49 P
ATOM 3 OP1 G A 852 30.428 -9.078 103.329 1.00 36.76 O
ATOM 4 OP2 G A 852 30.316 -9.263 100.824 1.00 36.20 O
ATOM 5 O5' G A 852 28.251 -8.744 102.125 1.00 36.56 O
ATOM 6 C5' G A 852 27.598 -10.020 102.141 1.00 36.57 C
ATOM 7 C4' G A 852 26.088 -9.886 102.128 1.00 36.64 C
ATOM 8 O4' G A 852 25.701 -9.056 101.030 1.00 36.43 O
ATOM 9 C3' G A 852 25.321 -11.158 101.942 1.00 36.63 C
ATOM 10 O3' G A 852 23.996 -10.911 102.341 1.00 36.79 O
ATOM 11 C2' G A 852 25.319 -11.323 100.436 1.00 36.31 C
ATOM 12 O2' G A 852 24.211 -12.105 99.936 1.00 36.27 O
ATOM 13 C1' G A 852 25.248 -9.856 99.969 1.00 36.22 C
ATOM 14 N9 G A 852 26.110 -9.531 98.845 1.00 35.96 N
ATOM 15 C8 G A 852 27.174 -8.727 99.075 1.00 35.96 C
ATOM 16 N7 G A 852 27.820 -8.457 97.994 1.00 35.72 N
ATOM 17 C5 G A 852 27.128 -9.073 96.999 1.00 35.55 C
ATOM 18 C6 G A 852 27.419 -9.087 95.635 1.00 35.29 C
ATOM 19 O6 G A 852 28.365 -8.507 95.079 1.00 35.16 O
ATOM 20 N1 G A 852 26.468 -9.828 94.931 1.00 35.20 N
ATOM 21 C2 G A 852 25.370 -10.445 95.507 1.00 35.36 C
ATOM 22 N2 G A 852 24.556 -11.133 94.678 1.00 35.26 N
ATOM 23 N3 G A 852 25.110 -10.428 96.806 1.00 35.61 N
ATOM 24 C4 G A 852 26.023 -9.724 97.486 1.00 35.69 C
ATOM 25 P G A 853 23.554 -11.069 103.853 1.00 41.50 P
ATOM 26 OP1 G A 853 24.345 -12.211 104.436 1.00 41.59 O
ATOM 27 OP2 G A 853 22.083 -11.155 103.857 1.00 41.59 O
ATOM 28 O5' G A 853 24.054 -9.705 104.484 1.00 41.63 O
TER
ATOM 1 O3' A B2220 27.928 -10.780 90.182 1.00 31.60 O
ATOM 2 P G B2221 26.594 -11.234 90.931 1.00 34.26 P
ATOM 3 OP1 G B2221 26.818 -11.016 92.388 1.00 34.47 O
ATOM 4 OP2 G B2221 26.255 -12.617 90.439 1.00 34.21 O
ATOM 5 O5' G B2221 25.548 -10.188 90.400 1.00 34.24 O
ATOM 6 C5' G B2221 25.164 -9.109 91.190 1.00 34.39 C
ATOM 7 C4' G B2221 24.084 -8.351 90.522 1.00 34.37 C
ATOM 8 O4' G B2221 24.354 -8.263 89.111 1.00 34.16 O
ATOM 9 C3' G B2221 22.735 -8.971 90.553 1.00 34.46 C
ATOM 10 O3' G B2221 22.118 -8.842 91.804 1.00 34.69 O
ATOM 11 C2' G B2221 22.044 -8.206 89.436 1.00 34.37 C
ATOM 12 O2' G B2221 21.842 -6.865 89.828 1.00 34.47 O
ATOM 13 C1' G B2221 23.145 -8.209 88.396 1.00 34.15 C
ATOM 14 N9 G B2221 23.097 -9.384 87.540 1.00 34.03 N
ATOM 15 C8 G B2221 24.005 -10.370 87.630 1.00 33.97 C
ATOM 16 N7 G B2221 23.779 -11.343 86.817 1.00 33.88 N
ATOM 17 C5 G B2221 22.649 -10.987 86.127 1.00 33.88 C
ATOM 18 C6 G B2221 21.935 -11.677 85.118 1.00 33.82 C
ATOM 19 O6 G B2221 22.195 -12.762 84.576 1.00 33.76 O
ATOM 20 N1 G B2221 20.831 -10.974 84.715 1.00 33.87 N
ATOM 21 C2 G B2221 20.459 -9.781 85.240 1.00 33.96 C
ATOM 22 N2 G B2221 19.399 -9.213 84.748 1.00 34.01 N
ATOM 23 N3 G B2221 21.085 -9.117 86.177 1.00 34.02 N
ATOM 24 C4 G B2221 22.212 -9.771 86.576 1.00 33.97 C
ATOM 25 P C B2222 21.578 -10.134 92.543 1.00 35.64 P
ATOM 26 OP1 C B2222 21.390 -9.783 93.935 1.00 35.88 O
ATOM 27 OP2 C B2222 22.486 -11.266 92.226 1.00 35.52 O
ATOM 28 O5' C B2222 20.178 -10.361 91.831 1.00 35.64 O
TER
ATOM 2 P G A 852 29.837 -8.646 102.059 1.00 36.49 P
ATOM 3 OP1 G A 852 30.428 -9.078 103.329 1.00 36.76 O
ATOM 4 OP2 G A 852 30.316 -9.263 100.824 1.00 36.20 O
ATOM 5 O5' G A 852 28.251 -8.744 102.125 1.00 36.56 O
ATOM 6 C5' G A 852 27.598 -10.020 102.141 1.00 36.57 C
ATOM 7 C4' G A 852 26.088 -9.886 102.128 1.00 36.64 C
ATOM 8 O4' G A 852 25.701 -9.056 101.030 1.00 36.43 O
ATOM 9 C3' G A 852 25.321 -11.158 101.942 1.00 36.63 C
ATOM 10 O3' G A 852 23.996 -10.911 102.341 1.00 36.79 O
ATOM 11 C2' G A 852 25.319 -11.323 100.436 1.00 36.31 C
ATOM 12 O2' G A 852 24.211 -12.105 99.936 1.00 36.27 O
ATOM 13 C1' G A 852 25.248 -9.856 99.969 1.00 36.22 C
ATOM 14 N9 G A 852 26.110 -9.531 98.845 1.00 35.96 N
ATOM 15 C8 G A 852 27.174 -8.727 99.075 1.00 35.96 C
ATOM 16 N7 G A 852 27.820 -8.457 97.994 1.00 35.72 N
ATOM 17 C5 G A 852 27.128 -9.073 96.999 1.00 35.55 C
ATOM 18 C6 G A 852 27.419 -9.087 95.635 1.00 35.29 C
ATOM 19 O6 G A 852 28.365 -8.507 95.079 1.00 35.16 O
ATOM 20 N1 G A 852 26.468 -9.828 94.931 1.00 35.20 N
ATOM 21 C2 G A 852 25.370 -10.445 95.507 1.00 35.36 C
ATOM 22 N2 G A 852 24.556 -11.133 94.678 1.00 35.26 N
ATOM 23 N3 G A 852 25.110 -10.428 96.806 1.00 35.61 N
ATOM 24 C4 G A 852 26.023 -9.724 97.486 1.00 35.69 C
ATOM 25 P G A 853 23.554 -11.069 103.853 1.00 41.50 P
ATOM 26 OP1 G A 853 24.345 -12.211 104.436 1.00 41.59 O
ATOM 27 OP2 G A 853 22.083 -11.155 103.857 1.00 41.59 O
ATOM 28 O5' G A 853 24.054 -9.705 104.484 1.00 41.63 O
TER
ATOM 1 O3' A B2220 27.928 -10.780 90.182 1.00 31.60 O
ATOM 2 P G B2221 26.594 -11.234 90.931 1.00 34.26 P
ATOM 3 OP1 G B2221 26.818 -11.016 92.388 1.00 34.47 O
ATOM 4 OP2 G B2221 26.255 -12.617 90.439 1.00 34.21 O
ATOM 5 O5' G B2221 25.548 -10.188 90.400 1.00 34.24 O
ATOM 6 C5' G B2221 25.164 -9.109 91.190 1.00 34.39 C
ATOM 7 C4' G B2221 24.084 -8.351 90.522 1.00 34.37 C
ATOM 8 O4' G B2221 24.354 -8.263 89.111 1.00 34.16 O
ATOM 9 C3' G B2221 22.735 -8.971 90.553 1.00 34.46 C
ATOM 10 O3' G B2221 22.118 -8.842 91.804 1.00 34.69 O
ATOM 11 C2' G B2221 22.044 -8.206 89.436 1.00 34.37 C
ATOM 12 O2' G B2221 21.842 -6.865 89.828 1.00 34.47 O
ATOM 13 C1' G B2221 23.145 -8.209 88.396 1.00 34.15 C
ATOM 14 N9 G B2221 23.097 -9.384 87.540 1.00 34.03 N
ATOM 15 C8 G B2221 24.005 -10.370 87.630 1.00 33.97 C
ATOM 16 N7 G B2221 23.779 -11.343 86.817 1.00 33.88 N
ATOM 17 C5 G B2221 22.649 -10.987 86.127 1.00 33.88 C
ATOM 18 C6 G B2221 21.935 -11.677 85.118 1.00 33.82 C
ATOM 19 O6 G B2221 22.195 -12.762 84.576 1.00 33.76 O
ATOM 20 N1 G B2221 20.831 -10.974 84.715 1.00 33.87 N
ATOM 21 C2 G B2221 20.459 -9.781 85.240 1.00 33.96 C
ATOM 22 N2 G B2221 19.399 -9.213 84.748 1.00 34.01 N
ATOM 23 N3 G B2221 21.085 -9.117 86.177 1.00 34.02 N
ATOM 24 C4 G B2221 22.212 -9.771 86.576 1.00 33.97 C
ATOM 25 P C B2222 21.578 -10.134 92.543 1.00 35.64 P
ATOM 26 OP1 C B2222 21.390 -9.783 93.935 1.00 35.88 O
ATOM 27 OP2 C B2222 22.486 -11.266 92.226 1.00 35.52 O
ATOM 28 O5' C B2222 20.178 -10.361 91.831 1.00 35.64 O
TER
Atoms:
OP1: (30.428,-9.078,103.329)
OP2: (30.316,-9.263,100.824)
C3': (25.321,-11.158,101.942)
C1': (25.248,-9.856,99.969)
C5': (27.598,-10.020,102.141)
O6: (28.365,-8.507,95.079)
O4': (25.701,-9.056,101.030)
C8: (27.174,-8.727,99.075)
C2: (25.370,-10.445,95.507)
C6: (27.419,-9.087,95.635)
C5: (27.128,-9.073,96.999)
C4: (26.023,-9.724,97.486)
P: (29.837,-8.646,102.059)
C4': (26.088,-9.886,102.128)
C2': (25.319,-11.323,100.436)
O2': (24.211,-12.105,99.936)
N1: (26.468,-9.828,94.931)
N2: (24.556,-11.133,94.678)
N3: (25.110,-10.428,96.806)
N7: (27.820,-8.457,97.994)
N9: (26.110,-9.531,98.845)
O5': (28.251,-8.744,102.125)
O3': (23.996,-10.911,102.341)
OP2: (30.316,-9.263,100.824)
C3': (25.321,-11.158,101.942)
C1': (25.248,-9.856,99.969)
C5': (27.598,-10.020,102.141)
O6: (28.365,-8.507,95.079)
O4': (25.701,-9.056,101.030)
C8: (27.174,-8.727,99.075)
C2: (25.370,-10.445,95.507)
C6: (27.419,-9.087,95.635)
C5: (27.128,-9.073,96.999)
C4: (26.023,-9.724,97.486)
P: (29.837,-8.646,102.059)
C4': (26.088,-9.886,102.128)
C2': (25.319,-11.323,100.436)
O2': (24.211,-12.105,99.936)
N1: (26.468,-9.828,94.931)
N2: (24.556,-11.133,94.678)
N3: (25.110,-10.428,96.806)
N7: (27.820,-8.457,97.994)
N9: (26.110,-9.531,98.845)
O5': (28.251,-8.744,102.125)
O3': (23.996,-10.911,102.341)
OP1: (26.818,-11.016,92.388)
OP2: (26.255,-12.617,90.439)
C3': (22.735,-8.971,90.553)
C1': (23.145,-8.209,88.396)
C5': (25.164,-9.109,91.190)
O6: (22.195,-12.762,84.576)
O4': (24.354,-8.263,89.111)
C8: (24.005,-10.370,87.630)
C2: (20.459,-9.781,85.240)
C6: (21.935,-11.677,85.118)
C5: (22.649,-10.987,86.127)
C4: (22.212,-9.771,86.576)
P: (26.594,-11.234,90.931)
C4': (24.084,-8.351,90.522)
C2': (22.044,-8.206,89.436)
O2': (21.842,-6.865,89.828)
N1: (20.831,-10.974,84.715)
N2: (19.399,-9.213,84.748)
N3: (21.085,-9.117,86.177)
N7: (23.779,-11.343,86.817)
N9: (23.097,-9.384,87.540)
O5': (25.548,-10.188,90.400)
O3': (22.118,-8.842,91.804)
OP2: (26.255,-12.617,90.439)
C3': (22.735,-8.971,90.553)
C1': (23.145,-8.209,88.396)
C5': (25.164,-9.109,91.190)
O6: (22.195,-12.762,84.576)
O4': (24.354,-8.263,89.111)
C8: (24.005,-10.370,87.630)
C2: (20.459,-9.781,85.240)
C6: (21.935,-11.677,85.118)
C5: (22.649,-10.987,86.127)
C4: (22.212,-9.771,86.576)
P: (26.594,-11.234,90.931)
C4': (24.084,-8.351,90.522)
C2': (22.044,-8.206,89.436)
O2': (21.842,-6.865,89.828)
N1: (20.831,-10.974,84.715)
N2: (19.399,-9.213,84.748)
N3: (21.085,-9.117,86.177)
N7: (23.779,-11.343,86.817)
N9: (23.097,-9.384,87.540)
O5': (25.548,-10.188,90.400)
O3': (22.118,-8.842,91.804)
Image (generated by PyMOL):