Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:435:118
Extra
PDB:
ATOM 1 O3' C A 34 63.616 -8.034 129.273 1.00 49.08 O
ATOM 2 P G A 35 63.204 -8.656 130.656 1.00 47.64 P
ATOM 3 OP1 G A 35 64.126 -8.116 131.660 1.00 48.35 O
ATOM 4 OP2 G A 35 63.118 -10.148 130.454 1.00 47.44 O
ATOM 5 O5' G A 35 61.751 -8.078 130.881 1.00 47.57 O
ATOM 6 C5' G A 35 61.420 -6.771 130.507 1.00 47.42 C
ATOM 7 C4' G A 35 59.951 -6.572 130.607 1.00 47.28 C
ATOM 8 O4' G A 35 59.312 -7.131 129.437 1.00 46.55 O
ATOM 9 C3' G A 35 59.264 -7.282 131.754 1.00 47.75 C
ATOM 10 O3' G A 35 59.433 -6.624 132.991 1.00 48.49 O
ATOM 11 C2' G A 35 57.817 -7.333 131.266 1.00 47.32 C
ATOM 12 O2' G A 35 57.192 -6.058 131.390 1.00 47.42 O
ATOM 13 C1' G A 35 58.032 -7.643 129.782 1.00 46.54 C
ATOM 14 N9 G A 35 58.049 -9.089 129.549 1.00 46.33 N
ATOM 15 C8 G A 35 59.116 -9.929 129.366 1.00 46.32 C
ATOM 16 N7 G A 35 58.797 -11.200 129.275 1.00 46.19 N
ATOM 17 C5 G A 35 57.425 -11.170 129.413 1.00 46.11 C
ATOM 18 C6 G A 35 56.449 -12.181 129.415 1.00 45.98 C
ATOM 19 O6 G A 35 56.563 -13.373 129.260 1.00 45.89 O
ATOM 20 N1 G A 35 55.188 -11.717 129.624 1.00 45.99 N
ATOM 21 C2 G A 35 54.873 -10.431 129.797 1.00 46.09 C
ATOM 22 N2 G A 35 53.598 -10.155 129.977 1.00 46.10 N
ATOM 23 N3 G A 35 55.748 -9.464 129.813 1.00 46.22 N
ATOM 24 C4 G A 35 56.985 -9.893 129.608 1.00 46.21 C
ATOM 25 P A A 36 59.132 -7.391 134.381 1.00 57.33 P
ATOM 26 OP1 A A 36 60.422 -7.769 134.968 1.00 57.80 O
ATOM 27 OP2 A A 36 58.152 -8.466 134.112 1.00 56.99 O
ATOM 28 O5' A A 36 58.459 -6.243 135.262 1.00 57.86 O
TER
ATOM 1 O3' A B 17 51.351 -14.863 131.339 1.00 49.08 O
ATOM 2 P G B 18 51.994 -13.805 130.335 1.00 48.70 P
ATOM 3 OP1 G B 18 52.433 -14.568 129.161 1.00 48.27 O
ATOM 4 OP2 G B 18 52.982 -13.027 131.088 1.00 49.10 O
ATOM 5 O5' G B 18 50.775 -12.879 129.976 1.00 48.43 O
ATOM 6 C5' G B 18 49.592 -13.406 129.386 1.00 48.10 C
ATOM 7 C4' G B 18 48.555 -12.339 129.278 1.00 47.96 C
ATOM 8 O4' G B 18 48.266 -11.845 130.629 1.00 48.50 O
ATOM 9 C3' G B 18 49.006 -11.116 128.484 1.00 47.68 C
ATOM 10 O3' G B 18 47.881 -10.499 127.851 1.00 47.35 O
ATOM 11 C2' G B 18 49.532 -10.208 129.594 1.00 48.18 C
ATOM 12 O2' G B 18 49.605 -8.861 129.249 1.00 48.06 O
ATOM 13 C1' G B 18 48.497 -10.460 130.672 1.00 48.54 C
ATOM 14 N9 G B 18 48.925 -10.088 132.015 1.00 49.14 N
ATOM 15 C8 G B 18 50.203 -10.139 132.498 1.00 49.45 C
ATOM 16 N7 G B 18 50.326 -9.693 133.732 1.00 50.00 N
ATOM 17 C5 G B 18 49.030 -9.335 134.104 1.00 50.06 C
ATOM 18 C6 G B 18 48.512 -8.792 135.327 1.00 50.57 C
ATOM 19 O6 G B 18 49.072 -8.488 136.388 1.00 51.10 O
ATOM 20 N1 G B 18 47.156 -8.578 135.277 1.00 50.45 N
ATOM 21 C2 G B 18 46.390 -8.838 134.191 1.00 49.91 C
ATOM 22 N2 G B 18 45.099 -8.556 134.361 1.00 49.91 N
ATOM 23 N3 G B 18 46.850 -9.316 133.048 1.00 49.44 N
ATOM 24 C4 G B 18 48.170 -9.549 133.048 1.00 49.53 C
ATOM 25 P G B 19 47.668 -10.622 126.264 1.00 50.44 P
ATOM 26 OP1 G B 19 46.291 -10.210 125.974 1.00 50.24 O
ATOM 27 OP2 G B 19 48.102 -11.968 125.857 1.00 50.31 O
ATOM 28 O5' G B 19 48.673 -9.554 125.688 1.00 50.30 O
TER
ATOM 2 P G A 35 63.204 -8.656 130.656 1.00 47.64 P
ATOM 3 OP1 G A 35 64.126 -8.116 131.660 1.00 48.35 O
ATOM 4 OP2 G A 35 63.118 -10.148 130.454 1.00 47.44 O
ATOM 5 O5' G A 35 61.751 -8.078 130.881 1.00 47.57 O
ATOM 6 C5' G A 35 61.420 -6.771 130.507 1.00 47.42 C
ATOM 7 C4' G A 35 59.951 -6.572 130.607 1.00 47.28 C
ATOM 8 O4' G A 35 59.312 -7.131 129.437 1.00 46.55 O
ATOM 9 C3' G A 35 59.264 -7.282 131.754 1.00 47.75 C
ATOM 10 O3' G A 35 59.433 -6.624 132.991 1.00 48.49 O
ATOM 11 C2' G A 35 57.817 -7.333 131.266 1.00 47.32 C
ATOM 12 O2' G A 35 57.192 -6.058 131.390 1.00 47.42 O
ATOM 13 C1' G A 35 58.032 -7.643 129.782 1.00 46.54 C
ATOM 14 N9 G A 35 58.049 -9.089 129.549 1.00 46.33 N
ATOM 15 C8 G A 35 59.116 -9.929 129.366 1.00 46.32 C
ATOM 16 N7 G A 35 58.797 -11.200 129.275 1.00 46.19 N
ATOM 17 C5 G A 35 57.425 -11.170 129.413 1.00 46.11 C
ATOM 18 C6 G A 35 56.449 -12.181 129.415 1.00 45.98 C
ATOM 19 O6 G A 35 56.563 -13.373 129.260 1.00 45.89 O
ATOM 20 N1 G A 35 55.188 -11.717 129.624 1.00 45.99 N
ATOM 21 C2 G A 35 54.873 -10.431 129.797 1.00 46.09 C
ATOM 22 N2 G A 35 53.598 -10.155 129.977 1.00 46.10 N
ATOM 23 N3 G A 35 55.748 -9.464 129.813 1.00 46.22 N
ATOM 24 C4 G A 35 56.985 -9.893 129.608 1.00 46.21 C
ATOM 25 P A A 36 59.132 -7.391 134.381 1.00 57.33 P
ATOM 26 OP1 A A 36 60.422 -7.769 134.968 1.00 57.80 O
ATOM 27 OP2 A A 36 58.152 -8.466 134.112 1.00 56.99 O
ATOM 28 O5' A A 36 58.459 -6.243 135.262 1.00 57.86 O
TER
ATOM 1 O3' A B 17 51.351 -14.863 131.339 1.00 49.08 O
ATOM 2 P G B 18 51.994 -13.805 130.335 1.00 48.70 P
ATOM 3 OP1 G B 18 52.433 -14.568 129.161 1.00 48.27 O
ATOM 4 OP2 G B 18 52.982 -13.027 131.088 1.00 49.10 O
ATOM 5 O5' G B 18 50.775 -12.879 129.976 1.00 48.43 O
ATOM 6 C5' G B 18 49.592 -13.406 129.386 1.00 48.10 C
ATOM 7 C4' G B 18 48.555 -12.339 129.278 1.00 47.96 C
ATOM 8 O4' G B 18 48.266 -11.845 130.629 1.00 48.50 O
ATOM 9 C3' G B 18 49.006 -11.116 128.484 1.00 47.68 C
ATOM 10 O3' G B 18 47.881 -10.499 127.851 1.00 47.35 O
ATOM 11 C2' G B 18 49.532 -10.208 129.594 1.00 48.18 C
ATOM 12 O2' G B 18 49.605 -8.861 129.249 1.00 48.06 O
ATOM 13 C1' G B 18 48.497 -10.460 130.672 1.00 48.54 C
ATOM 14 N9 G B 18 48.925 -10.088 132.015 1.00 49.14 N
ATOM 15 C8 G B 18 50.203 -10.139 132.498 1.00 49.45 C
ATOM 16 N7 G B 18 50.326 -9.693 133.732 1.00 50.00 N
ATOM 17 C5 G B 18 49.030 -9.335 134.104 1.00 50.06 C
ATOM 18 C6 G B 18 48.512 -8.792 135.327 1.00 50.57 C
ATOM 19 O6 G B 18 49.072 -8.488 136.388 1.00 51.10 O
ATOM 20 N1 G B 18 47.156 -8.578 135.277 1.00 50.45 N
ATOM 21 C2 G B 18 46.390 -8.838 134.191 1.00 49.91 C
ATOM 22 N2 G B 18 45.099 -8.556 134.361 1.00 49.91 N
ATOM 23 N3 G B 18 46.850 -9.316 133.048 1.00 49.44 N
ATOM 24 C4 G B 18 48.170 -9.549 133.048 1.00 49.53 C
ATOM 25 P G B 19 47.668 -10.622 126.264 1.00 50.44 P
ATOM 26 OP1 G B 19 46.291 -10.210 125.974 1.00 50.24 O
ATOM 27 OP2 G B 19 48.102 -11.968 125.857 1.00 50.31 O
ATOM 28 O5' G B 19 48.673 -9.554 125.688 1.00 50.30 O
TER
Atoms:
OP1: (64.126,-8.116,131.660)
OP2: (63.118,-10.148,130.454)
C3': (59.264,-7.282,131.754)
C1': (58.032,-7.643,129.782)
C5': (61.420,-6.771,130.507)
O6: (56.563,-13.373,129.260)
O4': (59.312,-7.131,129.437)
C8: (59.116,-9.929,129.366)
C2: (54.873,-10.431,129.797)
C6: (56.449,-12.181,129.415)
C5: (57.425,-11.170,129.413)
C4: (56.985,-9.893,129.608)
P: (63.204,-8.656,130.656)
C4': (59.951,-6.572,130.607)
C2': (57.817,-7.333,131.266)
O2': (57.192,-6.058,131.390)
N1: (55.188,-11.717,129.624)
N2: (53.598,-10.155,129.977)
N3: (55.748,-9.464,129.813)
N7: (58.797,-11.200,129.275)
N9: (58.049,-9.089,129.549)
O5': (61.751,-8.078,130.881)
O3': (59.433,-6.624,132.991)
OP2: (63.118,-10.148,130.454)
C3': (59.264,-7.282,131.754)
C1': (58.032,-7.643,129.782)
C5': (61.420,-6.771,130.507)
O6: (56.563,-13.373,129.260)
O4': (59.312,-7.131,129.437)
C8: (59.116,-9.929,129.366)
C2: (54.873,-10.431,129.797)
C6: (56.449,-12.181,129.415)
C5: (57.425,-11.170,129.413)
C4: (56.985,-9.893,129.608)
P: (63.204,-8.656,130.656)
C4': (59.951,-6.572,130.607)
C2': (57.817,-7.333,131.266)
O2': (57.192,-6.058,131.390)
N1: (55.188,-11.717,129.624)
N2: (53.598,-10.155,129.977)
N3: (55.748,-9.464,129.813)
N7: (58.797,-11.200,129.275)
N9: (58.049,-9.089,129.549)
O5': (61.751,-8.078,130.881)
O3': (59.433,-6.624,132.991)
OP1: (52.433,-14.568,129.161)
OP2: (52.982,-13.027,131.088)
C3': (49.006,-11.116,128.484)
C1': (48.497,-10.460,130.672)
C5': (49.592,-13.406,129.386)
O6: (49.072,-8.488,136.388)
O4': (48.266,-11.845,130.629)
C8: (50.203,-10.139,132.498)
C2: (46.390,-8.838,134.191)
C6: (48.512,-8.792,135.327)
C5: (49.030,-9.335,134.104)
C4: (48.170,-9.549,133.048)
P: (51.994,-13.805,130.335)
C4': (48.555,-12.339,129.278)
C2': (49.532,-10.208,129.594)
O2': (49.605,-8.861,129.249)
N1: (47.156,-8.578,135.277)
N2: (45.099,-8.556,134.361)
N3: (46.850,-9.316,133.048)
N7: (50.326,-9.693,133.732)
N9: (48.925,-10.088,132.015)
O5': (50.775,-12.879,129.976)
O3': (47.881,-10.499,127.851)
OP2: (52.982,-13.027,131.088)
C3': (49.006,-11.116,128.484)
C1': (48.497,-10.460,130.672)
C5': (49.592,-13.406,129.386)
O6: (49.072,-8.488,136.388)
O4': (48.266,-11.845,130.629)
C8: (50.203,-10.139,132.498)
C2: (46.390,-8.838,134.191)
C6: (48.512,-8.792,135.327)
C5: (49.030,-9.335,134.104)
C4: (48.170,-9.549,133.048)
P: (51.994,-13.805,130.335)
C4': (48.555,-12.339,129.278)
C2': (49.532,-10.208,129.594)
O2': (49.605,-8.861,129.249)
N1: (47.156,-8.578,135.277)
N2: (45.099,-8.556,134.361)
N3: (46.850,-9.316,133.048)
N7: (50.326,-9.693,133.732)
N9: (48.925,-10.088,132.015)
O5': (50.775,-12.879,129.976)
O3': (47.881,-10.499,127.851)
Image (generated by PyMOL):