Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21393:21369
Extra
PDB:
ATOM 1 O3' A A1392 -100.544 -64.242 77.615 1.00 96.03 O
ATOM 2 P A A1393 -100.099 -63.837 79.114 1.00100.47 P
ATOM 3 OP1 A A1393 -98.945 -64.701 79.472 1.00100.23 O
ATOM 4 OP2 A A1393 -101.322 -63.899 79.960 1.00101.48 O
ATOM 5 O5' A A1393 -99.612 -62.320 78.951 1.00 99.60 O
ATOM 6 C5' A A1393 -98.402 -62.010 78.263 1.00 98.59 C
ATOM 7 C4' A A1393 -98.478 -60.673 77.555 1.00 97.98 C
ATOM 8 O4' A A1393 -99.731 -60.557 76.850 1.00 98.46 O
ATOM 9 C3' A A1393 -98.425 -59.443 78.436 1.00 97.80 C
ATOM 10 O3' A A1393 -97.088 -59.078 78.748 1.00 97.02 O
ATOM 11 C2' A A1393 -99.159 -58.387 77.599 1.00 97.64 C
ATOM 12 O2' A A1393 -98.283 -57.804 76.662 1.00 96.70 O
ATOM 13 C1' A A1393 -100.151 -59.219 76.813 1.00 98.26 C
ATOM 14 N9 A A1393 -101.530 -59.133 77.326 1.00 99.20 N
ATOM 15 C8 A A1393 -102.188 -59.961 78.208 1.00100.12 C
ATOM 16 N7 A A1393 -103.448 -59.638 78.415 1.00100.85 N
ATOM 17 C5 A A1393 -103.637 -58.535 77.595 1.00100.39 C
ATOM 18 C6 A A1393 -104.749 -57.719 77.347 1.00100.77 C
ATOM 19 N6 A A1393 -105.928 -57.893 77.933 1.00101.75 N
ATOM 20 N1 A A1393 -104.603 -56.699 76.476 1.00100.15 N
ATOM 21 C2 A A1393 -103.414 -56.507 75.892 1.00 99.19 C
ATOM 22 N3 A A1393 -102.295 -57.210 76.037 1.00 98.73 N
ATOM 23 C4 A A1393 -102.471 -58.217 76.912 1.00 99.38 C
ATOM 24 P G A1394 -96.454 -59.348 80.208 1.00 95.95 P
ATOM 25 OP1 G A1394 -95.086 -59.895 80.000 1.00 95.33 O
ATOM 26 OP2 G A1394 -97.432 -60.149 80.977 1.00 97.01 O
ATOM 27 O5' G A1394 -96.356 -57.878 80.814 1.00 95.60 O
TER
ATOM 1 O3' G B1368 -114.001 -53.800 72.754 1.00 98.39 O
ATOM 2 P G B1369 -113.125 -52.893 73.750 1.00 94.75 P
ATOM 3 OP1 G B1369 -113.895 -52.759 75.003 1.00 95.58 O
ATOM 4 OP2 G B1369 -112.754 -51.666 73.004 1.00 94.04 O
ATOM 5 O5' G B1369 -111.833 -53.797 74.005 1.00 94.09 O
ATOM 6 C5' G B1369 -111.902 -54.951 74.845 1.00 94.62 C
ATOM 7 C4' G B1369 -110.535 -55.575 75.085 1.00 93.87 C
ATOM 8 O4' G B1369 -110.003 -56.136 73.858 1.00 93.35 O
ATOM 9 C3' G B1369 -109.454 -54.640 75.585 1.00 93.00 C
ATOM 10 O3' G B1369 -109.532 -54.453 76.979 1.00 93.35 O
ATOM 11 C2' G B1369 -108.167 -55.318 75.128 1.00 92.18 C
ATOM 12 O2' G B1369 -107.791 -56.344 76.031 1.00 92.43 O
ATOM 13 C1' G B1369 -108.605 -55.969 73.810 1.00 92.33 C
ATOM 14 N9 G B1369 -108.302 -55.127 72.641 1.00 91.64 N
ATOM 15 C8 G B1369 -109.195 -54.194 72.178 1.00 91.92 C
ATOM 16 N7 G B1369 -108.801 -53.537 71.137 1.00 91.27 N
ATOM 17 C5 G B1369 -107.578 -54.090 70.887 1.00 90.52 C
ATOM 18 C6 G B1369 -106.725 -53.728 69.841 1.00 89.65 C
ATOM 19 O6 G B1369 -106.976 -52.857 68.980 1.00 89.46 O
ATOM 20 N1 G B1369 -105.542 -54.486 69.899 1.00 89.07 N
ATOM 21 C2 G B1369 -105.274 -55.466 70.846 1.00 89.33 C
ATOM 22 N2 G B1369 -104.083 -56.086 70.720 1.00 88.69 N
ATOM 23 N3 G B1369 -106.107 -55.810 71.834 1.00 90.17 N
ATOM 24 C4 G B1369 -107.231 -55.074 71.793 1.00 90.72 C
ATOM 25 P A B1370 -109.784 -52.993 77.580 1.00 93.25 P
ATOM 26 OP1 A B1370 -110.623 -53.153 78.813 1.00 94.21 O
ATOM 27 OP2 A B1370 -110.294 -52.140 76.472 1.00 93.11 O
ATOM 28 O5' A B1370 -108.291 -52.555 77.967 1.00 92.20 O
TER
ATOM 2 P A A1393 -100.099 -63.837 79.114 1.00100.47 P
ATOM 3 OP1 A A1393 -98.945 -64.701 79.472 1.00100.23 O
ATOM 4 OP2 A A1393 -101.322 -63.899 79.960 1.00101.48 O
ATOM 5 O5' A A1393 -99.612 -62.320 78.951 1.00 99.60 O
ATOM 6 C5' A A1393 -98.402 -62.010 78.263 1.00 98.59 C
ATOM 7 C4' A A1393 -98.478 -60.673 77.555 1.00 97.98 C
ATOM 8 O4' A A1393 -99.731 -60.557 76.850 1.00 98.46 O
ATOM 9 C3' A A1393 -98.425 -59.443 78.436 1.00 97.80 C
ATOM 10 O3' A A1393 -97.088 -59.078 78.748 1.00 97.02 O
ATOM 11 C2' A A1393 -99.159 -58.387 77.599 1.00 97.64 C
ATOM 12 O2' A A1393 -98.283 -57.804 76.662 1.00 96.70 O
ATOM 13 C1' A A1393 -100.151 -59.219 76.813 1.00 98.26 C
ATOM 14 N9 A A1393 -101.530 -59.133 77.326 1.00 99.20 N
ATOM 15 C8 A A1393 -102.188 -59.961 78.208 1.00100.12 C
ATOM 16 N7 A A1393 -103.448 -59.638 78.415 1.00100.85 N
ATOM 17 C5 A A1393 -103.637 -58.535 77.595 1.00100.39 C
ATOM 18 C6 A A1393 -104.749 -57.719 77.347 1.00100.77 C
ATOM 19 N6 A A1393 -105.928 -57.893 77.933 1.00101.75 N
ATOM 20 N1 A A1393 -104.603 -56.699 76.476 1.00100.15 N
ATOM 21 C2 A A1393 -103.414 -56.507 75.892 1.00 99.19 C
ATOM 22 N3 A A1393 -102.295 -57.210 76.037 1.00 98.73 N
ATOM 23 C4 A A1393 -102.471 -58.217 76.912 1.00 99.38 C
ATOM 24 P G A1394 -96.454 -59.348 80.208 1.00 95.95 P
ATOM 25 OP1 G A1394 -95.086 -59.895 80.000 1.00 95.33 O
ATOM 26 OP2 G A1394 -97.432 -60.149 80.977 1.00 97.01 O
ATOM 27 O5' G A1394 -96.356 -57.878 80.814 1.00 95.60 O
TER
ATOM 1 O3' G B1368 -114.001 -53.800 72.754 1.00 98.39 O
ATOM 2 P G B1369 -113.125 -52.893 73.750 1.00 94.75 P
ATOM 3 OP1 G B1369 -113.895 -52.759 75.003 1.00 95.58 O
ATOM 4 OP2 G B1369 -112.754 -51.666 73.004 1.00 94.04 O
ATOM 5 O5' G B1369 -111.833 -53.797 74.005 1.00 94.09 O
ATOM 6 C5' G B1369 -111.902 -54.951 74.845 1.00 94.62 C
ATOM 7 C4' G B1369 -110.535 -55.575 75.085 1.00 93.87 C
ATOM 8 O4' G B1369 -110.003 -56.136 73.858 1.00 93.35 O
ATOM 9 C3' G B1369 -109.454 -54.640 75.585 1.00 93.00 C
ATOM 10 O3' G B1369 -109.532 -54.453 76.979 1.00 93.35 O
ATOM 11 C2' G B1369 -108.167 -55.318 75.128 1.00 92.18 C
ATOM 12 O2' G B1369 -107.791 -56.344 76.031 1.00 92.43 O
ATOM 13 C1' G B1369 -108.605 -55.969 73.810 1.00 92.33 C
ATOM 14 N9 G B1369 -108.302 -55.127 72.641 1.00 91.64 N
ATOM 15 C8 G B1369 -109.195 -54.194 72.178 1.00 91.92 C
ATOM 16 N7 G B1369 -108.801 -53.537 71.137 1.00 91.27 N
ATOM 17 C5 G B1369 -107.578 -54.090 70.887 1.00 90.52 C
ATOM 18 C6 G B1369 -106.725 -53.728 69.841 1.00 89.65 C
ATOM 19 O6 G B1369 -106.976 -52.857 68.980 1.00 89.46 O
ATOM 20 N1 G B1369 -105.542 -54.486 69.899 1.00 89.07 N
ATOM 21 C2 G B1369 -105.274 -55.466 70.846 1.00 89.33 C
ATOM 22 N2 G B1369 -104.083 -56.086 70.720 1.00 88.69 N
ATOM 23 N3 G B1369 -106.107 -55.810 71.834 1.00 90.17 N
ATOM 24 C4 G B1369 -107.231 -55.074 71.793 1.00 90.72 C
ATOM 25 P A B1370 -109.784 -52.993 77.580 1.00 93.25 P
ATOM 26 OP1 A B1370 -110.623 -53.153 78.813 1.00 94.21 O
ATOM 27 OP2 A B1370 -110.294 -52.140 76.472 1.00 93.11 O
ATOM 28 O5' A B1370 -108.291 -52.555 77.967 1.00 92.20 O
TER
Atoms:
OP1: (-98.945,-64.701,79.472)
OP2: (-101.322,-63.899,79.960)
C3': (-98.425,-59.443,78.436)
C1': (-100.151,-59.219,76.813)
C5': (-98.402,-62.010,78.263)
O4': (-99.731,-60.557,76.850)
C8: (-102.188,-59.961,78.208)
O2': (-98.283,-57.804,76.662)
C6: (-104.749,-57.719,77.347)
C5: (-103.637,-58.535,77.595)
C4: (-102.471,-58.217,76.912)
P: (-100.099,-63.837,79.114)
C4': (-98.478,-60.673,77.555)
C2': (-99.159,-58.387,77.599)
C2: (-103.414,-56.507,75.892)
N1: (-104.603,-56.699,76.476)
N3: (-102.295,-57.210,76.037)
N6: (-105.928,-57.893,77.933)
N7: (-103.448,-59.638,78.415)
N9: (-101.530,-59.133,77.326)
O5': (-99.612,-62.320,78.951)
O3': (-97.088,-59.078,78.748)
OP2: (-101.322,-63.899,79.960)
C3': (-98.425,-59.443,78.436)
C1': (-100.151,-59.219,76.813)
C5': (-98.402,-62.010,78.263)
O4': (-99.731,-60.557,76.850)
C8: (-102.188,-59.961,78.208)
O2': (-98.283,-57.804,76.662)
C6: (-104.749,-57.719,77.347)
C5: (-103.637,-58.535,77.595)
C4: (-102.471,-58.217,76.912)
P: (-100.099,-63.837,79.114)
C4': (-98.478,-60.673,77.555)
C2': (-99.159,-58.387,77.599)
C2: (-103.414,-56.507,75.892)
N1: (-104.603,-56.699,76.476)
N3: (-102.295,-57.210,76.037)
N6: (-105.928,-57.893,77.933)
N7: (-103.448,-59.638,78.415)
N9: (-101.530,-59.133,77.326)
O5': (-99.612,-62.320,78.951)
O3': (-97.088,-59.078,78.748)
OP1: (-113.895,-52.759,75.003)
OP2: (-112.754,-51.666,73.004)
C3': (-109.454,-54.640,75.585)
C1': (-108.605,-55.969,73.810)
C5': (-111.902,-54.951,74.845)
O6: (-106.976,-52.857,68.980)
O4': (-110.003,-56.136,73.858)
C8: (-109.195,-54.194,72.178)
C2: (-105.274,-55.466,70.846)
C6: (-106.725,-53.728,69.841)
C5: (-107.578,-54.090,70.887)
C4: (-107.231,-55.074,71.793)
P: (-113.125,-52.893,73.750)
C4': (-110.535,-55.575,75.085)
C2': (-108.167,-55.318,75.128)
O2': (-107.791,-56.344,76.031)
N1: (-105.542,-54.486,69.899)
N2: (-104.083,-56.086,70.720)
N3: (-106.107,-55.810,71.834)
N7: (-108.801,-53.537,71.137)
N9: (-108.302,-55.127,72.641)
O5': (-111.833,-53.797,74.005)
O3': (-109.532,-54.453,76.979)
OP2: (-112.754,-51.666,73.004)
C3': (-109.454,-54.640,75.585)
C1': (-108.605,-55.969,73.810)
C5': (-111.902,-54.951,74.845)
O6: (-106.976,-52.857,68.980)
O4': (-110.003,-56.136,73.858)
C8: (-109.195,-54.194,72.178)
C2: (-105.274,-55.466,70.846)
C6: (-106.725,-53.728,69.841)
C5: (-107.578,-54.090,70.887)
C4: (-107.231,-55.074,71.793)
P: (-113.125,-52.893,73.750)
C4': (-110.535,-55.575,75.085)
C2': (-108.167,-55.318,75.128)
O2': (-107.791,-56.344,76.031)
N1: (-105.542,-54.486,69.899)
N2: (-104.083,-56.086,70.720)
N3: (-106.107,-55.810,71.834)
N7: (-108.801,-53.537,71.137)
N9: (-108.302,-55.127,72.641)
O5': (-111.833,-53.797,74.005)
O3': (-109.532,-54.453,76.979)
Image (generated by PyMOL):