Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2474:A2476
Extra
PDB:
ATOM 1 O3' G A2473 -105.922 -64.687 -13.355 1.00 63.13 O
ATOM 2 P G A2474 -105.299 -65.526 -12.130 1.00 70.68 P
ATOM 3 OP1 G A2474 -104.268 -66.435 -12.676 1.00 66.69 O
ATOM 4 OP2 G A2474 -106.404 -66.116 -11.351 1.00 78.09 O
ATOM 5 O5' G A2474 -104.621 -64.397 -11.215 1.00 63.90 O
ATOM 6 C5' G A2474 -103.682 -63.502 -11.785 1.00 60.70 C
ATOM 7 C4' G A2474 -103.352 -62.385 -10.820 1.00 53.68 C
ATOM 8 O4' G A2474 -104.564 -61.636 -10.604 1.00 54.97 O
ATOM 9 C3' G A2474 -102.862 -62.856 -9.453 1.00 59.92 C
ATOM 10 O3' G A2474 -101.638 -62.250 -9.012 1.00 67.19 O
ATOM 11 C2' G A2474 -103.970 -62.478 -8.469 1.00 62.41 C
ATOM 12 O2' G A2474 -103.465 -61.906 -7.273 1.00 58.64 O
ATOM 13 C1' G A2474 -104.791 -61.448 -9.225 1.00 60.81 C
ATOM 14 N9 G A2474 -106.218 -61.603 -8.992 1.00 64.62 N
ATOM 15 C8 G A2474 -106.945 -62.760 -9.080 1.00 69.17 C
ATOM 16 N7 G A2474 -108.206 -62.593 -8.816 1.00 69.52 N
ATOM 17 C5 G A2474 -108.319 -61.240 -8.536 1.00 66.39 C
ATOM 18 C6 G A2474 -109.453 -60.476 -8.183 1.00 75.25 C
ATOM 19 O6 G A2474 -110.624 -60.860 -8.046 1.00 84.73 O
ATOM 20 N1 G A2474 -109.121 -59.133 -7.985 1.00 78.74 N
ATOM 21 C2 G A2474 -107.859 -58.595 -8.112 1.00 73.54 C
ATOM 22 N2 G A2474 -107.742 -57.279 -7.882 1.00 78.62 N
ATOM 23 N3 G A2474 -106.786 -59.302 -8.440 1.00 69.77 N
ATOM 24 C4 G A2474 -107.099 -60.611 -8.637 1.00 66.83 C
ATOM 25 P U A2475 -100.433 -61.716 -9.920 1.00 43.26 P
ATOM 26 OP1 U A2475 -100.487 -62.263 -11.302 1.00 37.98 O
ATOM 27 OP2 U A2475 -99.237 -61.946 -9.059 1.00 60.23 O
ATOM 28 O5' U A2475 -100.758 -60.134 -9.946 1.00 58.26 O
TER
ATOM 1 O3' U B2475 -99.088 -56.806 -9.314 1.00 53.70 O
ATOM 2 P U B2476 -99.348 -56.262 -7.814 1.00 68.33 P
ATOM 3 OP1 U B2476 -98.028 -56.264 -7.121 1.00 71.38 O
ATOM 4 OP2 U B2476 -100.495 -57.000 -7.230 1.00 66.75 O
ATOM 5 O5' U B2476 -99.850 -54.757 -8.020 1.00 71.19 O
ATOM 6 C5' U B2476 -98.926 -53.710 -8.224 1.00 62.73 C
ATOM 7 C4' U B2476 -99.651 -52.385 -8.300 1.00 57.10 C
ATOM 8 O4' U B2476 -100.823 -52.502 -9.140 1.00 56.82 O
ATOM 9 C3' U B2476 -100.210 -51.903 -6.983 1.00 62.09 C
ATOM 10 O3' U B2476 -99.158 -51.306 -6.265 1.00 63.18 O
ATOM 11 C2' U B2476 -101.227 -50.887 -7.487 1.00 63.95 C
ATOM 12 O2' U B2476 -100.627 -49.731 -8.027 1.00 64.16 O
ATOM 13 C1' U B2476 -101.847 -51.668 -8.635 1.00 62.07 C
ATOM 14 N1 U B2476 -102.998 -52.538 -8.256 1.00 64.43 N
ATOM 15 C2 U B2476 -104.148 -52.001 -7.697 1.00 70.52 C
ATOM 16 O2 U B2476 -104.316 -50.814 -7.459 1.00 71.81 O
ATOM 17 N3 U B2476 -105.121 -52.924 -7.407 1.00 68.91 N
ATOM 18 C4 U B2476 -105.073 -54.286 -7.618 1.00 60.69 C
ATOM 19 O4 U B2476 -106.030 -54.981 -7.306 1.00 58.63 O
ATOM 20 C5 U B2476 -103.854 -54.762 -8.203 1.00 64.57 C
ATOM 21 C6 U B2476 -102.887 -53.890 -8.494 1.00 60.92 C
ATOM 22 P U B2477 -99.093 -51.441 -4.680 1.00 58.68 P
ATOM 23 OP1 U B2477 -97.894 -50.699 -4.241 1.00 56.83 O
ATOM 24 OP2 U B2477 -99.278 -52.861 -4.304 1.00 52.44 O
ATOM 25 O5' U B2477 -100.392 -50.635 -4.203 1.00 59.54 O
TER
ATOM 2 P G A2474 -105.299 -65.526 -12.130 1.00 70.68 P
ATOM 3 OP1 G A2474 -104.268 -66.435 -12.676 1.00 66.69 O
ATOM 4 OP2 G A2474 -106.404 -66.116 -11.351 1.00 78.09 O
ATOM 5 O5' G A2474 -104.621 -64.397 -11.215 1.00 63.90 O
ATOM 6 C5' G A2474 -103.682 -63.502 -11.785 1.00 60.70 C
ATOM 7 C4' G A2474 -103.352 -62.385 -10.820 1.00 53.68 C
ATOM 8 O4' G A2474 -104.564 -61.636 -10.604 1.00 54.97 O
ATOM 9 C3' G A2474 -102.862 -62.856 -9.453 1.00 59.92 C
ATOM 10 O3' G A2474 -101.638 -62.250 -9.012 1.00 67.19 O
ATOM 11 C2' G A2474 -103.970 -62.478 -8.469 1.00 62.41 C
ATOM 12 O2' G A2474 -103.465 -61.906 -7.273 1.00 58.64 O
ATOM 13 C1' G A2474 -104.791 -61.448 -9.225 1.00 60.81 C
ATOM 14 N9 G A2474 -106.218 -61.603 -8.992 1.00 64.62 N
ATOM 15 C8 G A2474 -106.945 -62.760 -9.080 1.00 69.17 C
ATOM 16 N7 G A2474 -108.206 -62.593 -8.816 1.00 69.52 N
ATOM 17 C5 G A2474 -108.319 -61.240 -8.536 1.00 66.39 C
ATOM 18 C6 G A2474 -109.453 -60.476 -8.183 1.00 75.25 C
ATOM 19 O6 G A2474 -110.624 -60.860 -8.046 1.00 84.73 O
ATOM 20 N1 G A2474 -109.121 -59.133 -7.985 1.00 78.74 N
ATOM 21 C2 G A2474 -107.859 -58.595 -8.112 1.00 73.54 C
ATOM 22 N2 G A2474 -107.742 -57.279 -7.882 1.00 78.62 N
ATOM 23 N3 G A2474 -106.786 -59.302 -8.440 1.00 69.77 N
ATOM 24 C4 G A2474 -107.099 -60.611 -8.637 1.00 66.83 C
ATOM 25 P U A2475 -100.433 -61.716 -9.920 1.00 43.26 P
ATOM 26 OP1 U A2475 -100.487 -62.263 -11.302 1.00 37.98 O
ATOM 27 OP2 U A2475 -99.237 -61.946 -9.059 1.00 60.23 O
ATOM 28 O5' U A2475 -100.758 -60.134 -9.946 1.00 58.26 O
TER
ATOM 1 O3' U B2475 -99.088 -56.806 -9.314 1.00 53.70 O
ATOM 2 P U B2476 -99.348 -56.262 -7.814 1.00 68.33 P
ATOM 3 OP1 U B2476 -98.028 -56.264 -7.121 1.00 71.38 O
ATOM 4 OP2 U B2476 -100.495 -57.000 -7.230 1.00 66.75 O
ATOM 5 O5' U B2476 -99.850 -54.757 -8.020 1.00 71.19 O
ATOM 6 C5' U B2476 -98.926 -53.710 -8.224 1.00 62.73 C
ATOM 7 C4' U B2476 -99.651 -52.385 -8.300 1.00 57.10 C
ATOM 8 O4' U B2476 -100.823 -52.502 -9.140 1.00 56.82 O
ATOM 9 C3' U B2476 -100.210 -51.903 -6.983 1.00 62.09 C
ATOM 10 O3' U B2476 -99.158 -51.306 -6.265 1.00 63.18 O
ATOM 11 C2' U B2476 -101.227 -50.887 -7.487 1.00 63.95 C
ATOM 12 O2' U B2476 -100.627 -49.731 -8.027 1.00 64.16 O
ATOM 13 C1' U B2476 -101.847 -51.668 -8.635 1.00 62.07 C
ATOM 14 N1 U B2476 -102.998 -52.538 -8.256 1.00 64.43 N
ATOM 15 C2 U B2476 -104.148 -52.001 -7.697 1.00 70.52 C
ATOM 16 O2 U B2476 -104.316 -50.814 -7.459 1.00 71.81 O
ATOM 17 N3 U B2476 -105.121 -52.924 -7.407 1.00 68.91 N
ATOM 18 C4 U B2476 -105.073 -54.286 -7.618 1.00 60.69 C
ATOM 19 O4 U B2476 -106.030 -54.981 -7.306 1.00 58.63 O
ATOM 20 C5 U B2476 -103.854 -54.762 -8.203 1.00 64.57 C
ATOM 21 C6 U B2476 -102.887 -53.890 -8.494 1.00 60.92 C
ATOM 22 P U B2477 -99.093 -51.441 -4.680 1.00 58.68 P
ATOM 23 OP1 U B2477 -97.894 -50.699 -4.241 1.00 56.83 O
ATOM 24 OP2 U B2477 -99.278 -52.861 -4.304 1.00 52.44 O
ATOM 25 O5' U B2477 -100.392 -50.635 -4.203 1.00 59.54 O
TER
Atoms:
OP1: (-104.268,-66.435,-12.676)
OP2: (-106.404,-66.116,-11.351)
C3': (-102.862,-62.856,-9.453)
C1': (-104.791,-61.448,-9.225)
C5': (-103.682,-63.502,-11.785)
O6: (-110.624,-60.860,-8.046)
O4': (-104.564,-61.636,-10.604)
C8: (-106.945,-62.760,-9.080)
C2: (-107.859,-58.595,-8.112)
C6: (-109.453,-60.476,-8.183)
C5: (-108.319,-61.240,-8.536)
C4: (-107.099,-60.611,-8.637)
P: (-105.299,-65.526,-12.130)
C4': (-103.352,-62.385,-10.820)
C2': (-103.970,-62.478,-8.469)
O2': (-103.465,-61.906,-7.273)
N1: (-109.121,-59.133,-7.985)
N2: (-107.742,-57.279,-7.882)
N3: (-106.786,-59.302,-8.440)
N7: (-108.206,-62.593,-8.816)
N9: (-106.218,-61.603,-8.992)
O5': (-104.621,-64.397,-11.215)
O3': (-101.638,-62.250,-9.012)
OP2: (-106.404,-66.116,-11.351)
C3': (-102.862,-62.856,-9.453)
C1': (-104.791,-61.448,-9.225)
C5': (-103.682,-63.502,-11.785)
O6: (-110.624,-60.860,-8.046)
O4': (-104.564,-61.636,-10.604)
C8: (-106.945,-62.760,-9.080)
C2: (-107.859,-58.595,-8.112)
C6: (-109.453,-60.476,-8.183)
C5: (-108.319,-61.240,-8.536)
C4: (-107.099,-60.611,-8.637)
P: (-105.299,-65.526,-12.130)
C4': (-103.352,-62.385,-10.820)
C2': (-103.970,-62.478,-8.469)
O2': (-103.465,-61.906,-7.273)
N1: (-109.121,-59.133,-7.985)
N2: (-107.742,-57.279,-7.882)
N3: (-106.786,-59.302,-8.440)
N7: (-108.206,-62.593,-8.816)
N9: (-106.218,-61.603,-8.992)
O5': (-104.621,-64.397,-11.215)
O3': (-101.638,-62.250,-9.012)
C4: (-105.073,-54.286,-7.618)
N3: (-105.121,-52.924,-7.407)
OP1: (-98.028,-56.264,-7.121)
OP2: (-100.495,-57.000,-7.230)
C2: (-104.148,-52.001,-7.697)
C1': (-101.847,-51.668,-8.635)
C3': (-100.210,-51.903,-6.983)
O5': (-99.850,-54.757,-8.020)
O4': (-100.823,-52.502,-9.140)
C5': (-98.926,-53.710,-8.224)
P: (-99.348,-56.262,-7.814)
C4': (-99.651,-52.385,-8.300)
C2': (-101.227,-50.887,-7.487)
O2': (-100.627,-49.731,-8.027)
N1: (-102.998,-52.538,-8.256)
O4: (-106.030,-54.981,-7.306)
O2: (-104.316,-50.814,-7.459)
C6: (-102.887,-53.890,-8.494)
C5: (-103.854,-54.762,-8.203)
O3': (-99.158,-51.306,-6.265)
N3: (-105.121,-52.924,-7.407)
OP1: (-98.028,-56.264,-7.121)
OP2: (-100.495,-57.000,-7.230)
C2: (-104.148,-52.001,-7.697)
C1': (-101.847,-51.668,-8.635)
C3': (-100.210,-51.903,-6.983)
O5': (-99.850,-54.757,-8.020)
O4': (-100.823,-52.502,-9.140)
C5': (-98.926,-53.710,-8.224)
P: (-99.348,-56.262,-7.814)
C4': (-99.651,-52.385,-8.300)
C2': (-101.227,-50.887,-7.487)
O2': (-100.627,-49.731,-8.027)
N1: (-102.998,-52.538,-8.256)
O4: (-106.030,-54.981,-7.306)
O2: (-104.316,-50.814,-7.459)
C6: (-102.887,-53.890,-8.494)
C5: (-103.854,-54.762,-8.203)
O3': (-99.158,-51.306,-6.265)
Image (generated by PyMOL):