Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DVZ:A8:A9
Extra
PDB:
ATOM 1 O3' A A 7 -2.497 50.069 -18.968 0.55 12.36 O
ATOM 2 P G A 8 -1.566 49.936 -20.262 1.00 13.71 P
ATOM 3 OP1 G A 8 -0.163 50.173 -19.859 1.00 15.11 O
ATOM 4 OP2 G A 8 -2.173 50.709 -21.361 1.00 13.71 O
ATOM 5 O5' G A 8 -1.782 48.402 -20.668 1.00 17.18 O
ATOM 6 C5' G A 8 -0.951 47.351 -20.199 1.00 18.44 C
ATOM 7 C4' G A 8 -1.321 46.857 -18.815 1.00 15.07 C
ATOM 8 O4' G A 8 -2.651 46.265 -18.793 1.00 14.64 O
ATOM 9 C3' G A 8 -0.399 45.748 -18.335 1.00 13.46 C
ATOM 10 O3' G A 8 -0.365 45.801 -16.927 1.00 11.58 O
ATOM 11 C2' G A 8 -1.152 44.518 -18.825 1.00 13.06 C
ATOM 12 O2' G A 8 -0.721 43.320 -18.211 1.00 15.50 O
ATOM 13 C1' G A 8 -2.529 44.931 -18.332 1.00 12.15 C
ATOM 14 N9 G A 8 -3.656 44.128 -18.804 1.00 13.23 N
ATOM 15 C8 G A 8 -3.785 43.419 -19.974 1.00 15.66 C
ATOM 16 N7 G A 8 -4.936 42.808 -20.081 1.00 15.37 N
ATOM 17 C5 G A 8 -5.611 43.132 -18.909 1.00 13.09 C
ATOM 18 C6 G A 8 -6.902 42.769 -18.451 1.00 13.39 C
ATOM 19 O6 G A 8 -7.745 42.055 -19.011 1.00 16.10 O
ATOM 20 N1 G A 8 -7.187 43.324 -17.204 1.00 13.23 N
ATOM 21 C2 G A 8 -6.332 44.129 -16.491 1.00 11.97 C
ATOM 22 N2 G A 8 -6.775 44.574 -15.307 1.00 11.99 N
ATOM 23 N3 G A 8 -5.123 44.477 -16.909 1.00 11.77 N
ATOM 24 C4 G A 8 -4.833 43.943 -18.119 1.00 12.06 C
ATOM 25 P U A 9 0.728 44.980 -16.101 1.00 12.53 P
ATOM 26 OP1 U A 9 1.907 44.757 -16.969 1.00 14.29 O
ATOM 27 OP2 U A 9 0.051 43.827 -15.466 1.00 13.45 O
ATOM 28 O5' U A 9 1.103 46.005 -14.937 1.00 12.66 O
TER
ATOM 1 O3' G B 8 -0.365 45.801 -16.927 1.00 11.58 O
ATOM 2 P U B 9 0.728 44.980 -16.101 1.00 12.53 P
ATOM 3 OP1 U B 9 1.907 44.757 -16.969 1.00 14.29 O
ATOM 4 OP2 U B 9 0.051 43.827 -15.466 1.00 13.45 O
ATOM 5 O5' U B 9 1.103 46.005 -14.937 1.00 12.66 O
ATOM 6 C5' U B 9 1.836 47.184 -15.219 1.00 12.04 C
ATOM 7 C4' U B 9 1.485 48.235 -14.188 1.00 12.56 C
ATOM 8 O4' U B 9 0.195 48.795 -14.526 1.00 12.42 O
ATOM 9 C3' U B 9 1.322 47.696 -12.774 1.00 12.08 C
ATOM 10 O3' U B 9 2.569 47.723 -12.100 1.00 12.26 O
ATOM 11 C2' U B 9 0.352 48.697 -12.162 1.00 11.56 C
ATOM 12 O2' U B 9 1.020 49.868 -11.735 1.00 12.35 O
ATOM 13 C1' U B 9 -0.552 49.016 -13.349 1.00 12.50 C
ATOM 14 N1 U B 9 -1.798 48.202 -13.430 1.00 11.24 N
ATOM 15 C2 U B 9 -2.709 48.304 -12.405 1.00 10.03 C
ATOM 16 O2 U B 9 -2.531 49.015 -11.433 1.00 11.01 O
ATOM 17 N3 U B 9 -3.836 47.539 -12.558 1.00 10.48 N
ATOM 18 C4 U B 9 -4.137 46.703 -13.616 1.00 10.77 C
ATOM 19 O4 U B 9 -5.192 46.078 -13.611 1.00 11.61 O
ATOM 20 C5 U B 9 -3.138 46.655 -14.654 1.00 11.99 C
ATOM 21 C6 U B 9 -2.029 47.392 -14.523 1.00 11.21 C
ATOM 22 P A B 10 2.970 46.526 -11.123 1.00 13.02 P
ATOM 23 OP1 A B 10 4.310 46.831 -10.570 1.00 16.02 O
ATOM 24 OP2 A B 10 2.738 45.255 -11.841 1.00 13.51 O
ATOM 25 O5' A B 10 1.888 46.620 -9.952 1.00 11.63 O
TER
ATOM 2 P G A 8 -1.566 49.936 -20.262 1.00 13.71 P
ATOM 3 OP1 G A 8 -0.163 50.173 -19.859 1.00 15.11 O
ATOM 4 OP2 G A 8 -2.173 50.709 -21.361 1.00 13.71 O
ATOM 5 O5' G A 8 -1.782 48.402 -20.668 1.00 17.18 O
ATOM 6 C5' G A 8 -0.951 47.351 -20.199 1.00 18.44 C
ATOM 7 C4' G A 8 -1.321 46.857 -18.815 1.00 15.07 C
ATOM 8 O4' G A 8 -2.651 46.265 -18.793 1.00 14.64 O
ATOM 9 C3' G A 8 -0.399 45.748 -18.335 1.00 13.46 C
ATOM 10 O3' G A 8 -0.365 45.801 -16.927 1.00 11.58 O
ATOM 11 C2' G A 8 -1.152 44.518 -18.825 1.00 13.06 C
ATOM 12 O2' G A 8 -0.721 43.320 -18.211 1.00 15.50 O
ATOM 13 C1' G A 8 -2.529 44.931 -18.332 1.00 12.15 C
ATOM 14 N9 G A 8 -3.656 44.128 -18.804 1.00 13.23 N
ATOM 15 C8 G A 8 -3.785 43.419 -19.974 1.00 15.66 C
ATOM 16 N7 G A 8 -4.936 42.808 -20.081 1.00 15.37 N
ATOM 17 C5 G A 8 -5.611 43.132 -18.909 1.00 13.09 C
ATOM 18 C6 G A 8 -6.902 42.769 -18.451 1.00 13.39 C
ATOM 19 O6 G A 8 -7.745 42.055 -19.011 1.00 16.10 O
ATOM 20 N1 G A 8 -7.187 43.324 -17.204 1.00 13.23 N
ATOM 21 C2 G A 8 -6.332 44.129 -16.491 1.00 11.97 C
ATOM 22 N2 G A 8 -6.775 44.574 -15.307 1.00 11.99 N
ATOM 23 N3 G A 8 -5.123 44.477 -16.909 1.00 11.77 N
ATOM 24 C4 G A 8 -4.833 43.943 -18.119 1.00 12.06 C
ATOM 25 P U A 9 0.728 44.980 -16.101 1.00 12.53 P
ATOM 26 OP1 U A 9 1.907 44.757 -16.969 1.00 14.29 O
ATOM 27 OP2 U A 9 0.051 43.827 -15.466 1.00 13.45 O
ATOM 28 O5' U A 9 1.103 46.005 -14.937 1.00 12.66 O
TER
ATOM 1 O3' G B 8 -0.365 45.801 -16.927 1.00 11.58 O
ATOM 2 P U B 9 0.728 44.980 -16.101 1.00 12.53 P
ATOM 3 OP1 U B 9 1.907 44.757 -16.969 1.00 14.29 O
ATOM 4 OP2 U B 9 0.051 43.827 -15.466 1.00 13.45 O
ATOM 5 O5' U B 9 1.103 46.005 -14.937 1.00 12.66 O
ATOM 6 C5' U B 9 1.836 47.184 -15.219 1.00 12.04 C
ATOM 7 C4' U B 9 1.485 48.235 -14.188 1.00 12.56 C
ATOM 8 O4' U B 9 0.195 48.795 -14.526 1.00 12.42 O
ATOM 9 C3' U B 9 1.322 47.696 -12.774 1.00 12.08 C
ATOM 10 O3' U B 9 2.569 47.723 -12.100 1.00 12.26 O
ATOM 11 C2' U B 9 0.352 48.697 -12.162 1.00 11.56 C
ATOM 12 O2' U B 9 1.020 49.868 -11.735 1.00 12.35 O
ATOM 13 C1' U B 9 -0.552 49.016 -13.349 1.00 12.50 C
ATOM 14 N1 U B 9 -1.798 48.202 -13.430 1.00 11.24 N
ATOM 15 C2 U B 9 -2.709 48.304 -12.405 1.00 10.03 C
ATOM 16 O2 U B 9 -2.531 49.015 -11.433 1.00 11.01 O
ATOM 17 N3 U B 9 -3.836 47.539 -12.558 1.00 10.48 N
ATOM 18 C4 U B 9 -4.137 46.703 -13.616 1.00 10.77 C
ATOM 19 O4 U B 9 -5.192 46.078 -13.611 1.00 11.61 O
ATOM 20 C5 U B 9 -3.138 46.655 -14.654 1.00 11.99 C
ATOM 21 C6 U B 9 -2.029 47.392 -14.523 1.00 11.21 C
ATOM 22 P A B 10 2.970 46.526 -11.123 1.00 13.02 P
ATOM 23 OP1 A B 10 4.310 46.831 -10.570 1.00 16.02 O
ATOM 24 OP2 A B 10 2.738 45.255 -11.841 1.00 13.51 O
ATOM 25 O5' A B 10 1.888 46.620 -9.952 1.00 11.63 O
TER
Atoms:
OP1: (-0.163,50.173,-19.859)
OP2: (-2.173,50.709,-21.361)
C3': (-0.399,45.748,-18.335)
C1': (-2.529,44.931,-18.332)
C5': (-0.951,47.351,-20.199)
O6: (-7.745,42.055,-19.011)
O4': (-2.651,46.265,-18.793)
C8: (-3.785,43.419,-19.974)
C2: (-6.332,44.129,-16.491)
C6: (-6.902,42.769,-18.451)
C5: (-5.611,43.132,-18.909)
C4: (-4.833,43.943,-18.119)
P: (-1.566,49.936,-20.262)
C4': (-1.321,46.857,-18.815)
C2': (-1.152,44.518,-18.825)
O2': (-0.721,43.320,-18.211)
N1: (-7.187,43.324,-17.204)
N2: (-6.775,44.574,-15.307)
N3: (-5.123,44.477,-16.909)
N7: (-4.936,42.808,-20.081)
N9: (-3.656,44.128,-18.804)
O5': (-1.782,48.402,-20.668)
O3': (-0.365,45.801,-16.927)
OP2: (-2.173,50.709,-21.361)
C3': (-0.399,45.748,-18.335)
C1': (-2.529,44.931,-18.332)
C5': (-0.951,47.351,-20.199)
O6: (-7.745,42.055,-19.011)
O4': (-2.651,46.265,-18.793)
C8: (-3.785,43.419,-19.974)
C2: (-6.332,44.129,-16.491)
C6: (-6.902,42.769,-18.451)
C5: (-5.611,43.132,-18.909)
C4: (-4.833,43.943,-18.119)
P: (-1.566,49.936,-20.262)
C4': (-1.321,46.857,-18.815)
C2': (-1.152,44.518,-18.825)
O2': (-0.721,43.320,-18.211)
N1: (-7.187,43.324,-17.204)
N2: (-6.775,44.574,-15.307)
N3: (-5.123,44.477,-16.909)
N7: (-4.936,42.808,-20.081)
N9: (-3.656,44.128,-18.804)
O5': (-1.782,48.402,-20.668)
O3': (-0.365,45.801,-16.927)
C4: (-4.137,46.703,-13.616)
N3: (-3.836,47.539,-12.558)
OP1: (1.907,44.757,-16.969)
OP2: (0.051,43.827,-15.466)
C2: (-2.709,48.304,-12.405)
C1': (-0.552,49.016,-13.349)
C3': (1.322,47.696,-12.774)
O5': (1.103,46.005,-14.937)
O4': (0.195,48.795,-14.526)
C5': (1.836,47.184,-15.219)
P: (0.728,44.980,-16.101)
C4': (1.485,48.235,-14.188)
C2': (0.352,48.697,-12.162)
O2': (1.020,49.868,-11.735)
N1: (-1.798,48.202,-13.430)
O4: (-5.192,46.078,-13.611)
O2: (-2.531,49.015,-11.433)
C6: (-2.029,47.392,-14.523)
C5: (-3.138,46.655,-14.654)
O3': (2.569,47.723,-12.100)
N3: (-3.836,47.539,-12.558)
OP1: (1.907,44.757,-16.969)
OP2: (0.051,43.827,-15.466)
C2: (-2.709,48.304,-12.405)
C1': (-0.552,49.016,-13.349)
C3': (1.322,47.696,-12.774)
O5': (1.103,46.005,-14.937)
O4': (0.195,48.795,-14.526)
C5': (1.836,47.184,-15.219)
P: (0.728,44.980,-16.101)
C4': (1.485,48.235,-14.188)
C2': (0.352,48.697,-12.162)
O2': (1.020,49.868,-11.735)
N1: (-1.798,48.202,-13.430)
O4: (-5.192,46.078,-13.611)
O2: (-2.531,49.015,-11.433)
C6: (-2.029,47.392,-14.523)
C5: (-3.138,46.655,-14.654)
O3': (2.569,47.723,-12.100)
Image (generated by PyMOL):