ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCS:0576:0577

Extra

PDB:
ATOM 1 O3' A A 575 -8.934 86.687 110.628 1.00 77.69 O
ATOM 2 P G A 576 -9.122 85.233 109.996 1.00 79.69 P
ATOM 3 OP1 G A 576 -10.564 84.932 110.099 1.00 82.00 O
ATOM 4 OP2 G A 576 -8.132 84.324 110.627 1.00 78.33 O
ATOM 5 O5' G A 576 -8.783 85.436 108.451 1.00 79.79 O
ATOM 6 C5' G A 576 -7.484 85.898 108.033 1.00 78.21 C
ATOM 7 C4' G A 576 -7.446 87.413 108.000 1.00 76.13 C
ATOM 8 O4' G A 576 -6.225 87.874 108.620 1.00 75.40 O
ATOM 9 C3' G A 576 -7.481 88.102 106.642 1.00 74.05 C
ATOM 10 O3' G A 576 -7.957 89.422 106.924 1.00 73.28 O
ATOM 11 C2' G A 576 -6.001 88.127 106.290 1.00 73.33 C
ATOM 12 O2' G A 576 -5.671 89.103 105.326 1.00 74.35 O
ATOM 13 C1' G A 576 -5.407 88.488 107.650 1.00 72.65 C
ATOM 14 N9 G A 576 -4.043 88.061 107.918 1.00 70.10 N
ATOM 15 C8 G A 576 -3.401 86.934 107.467 1.00 68.38 C
ATOM 16 N7 G A 576 -2.189 86.819 107.937 1.00 67.77 N
ATOM 17 C5 G A 576 -2.024 87.946 108.734 1.00 67.82 C
ATOM 18 C6 G A 576 -0.917 88.375 109.502 1.00 68.16 C
ATOM 19 O6 G A 576 0.184 87.833 109.636 1.00 69.51 O
ATOM 20 N1 G A 576 -1.182 89.573 110.155 1.00 67.58 N
ATOM 21 C2 G A 576 -2.353 90.273 110.073 1.00 67.45 C
ATOM 22 N2 G A 576 -2.408 91.417 110.767 1.00 67.38 N
ATOM 23 N3 G A 576 -3.391 89.886 109.361 1.00 67.52 N
ATOM 24 C4 G A 576 -3.156 88.721 108.723 1.00 68.08 C
ATOM 25 P U A 577 -8.270 90.459 105.738 1.00 72.99 P
ATOM 26 OP1 U A 577 -8.865 89.710 104.599 1.00 72.21 O
ATOM 27 OP2 U A 577 -7.066 91.301 105.517 1.00 71.94 O
ATOM 28 O5' U A 577 -9.382 91.405 106.377 1.00 71.48 O
TER

ATOM 1 O3' G B 576 -7.957 89.422 106.924 1.00 73.28 O
ATOM 2 P U B 577 -8.270 90.459 105.738 1.00 72.99 P
ATOM 3 OP1 U B 577 -8.865 89.710 104.599 1.00 72.21 O
ATOM 4 OP2 U B 577 -7.066 91.301 105.517 1.00 71.94 O
ATOM 5 O5' U B 577 -9.382 91.405 106.377 1.00 71.48 O
ATOM 6 C5' U B 577 -10.657 90.875 106.814 1.00 71.38 C
ATOM 7 C4' U B 577 -11.191 91.687 107.972 1.00 70.14 C
ATOM 8 O4' U B 577 -10.583 91.264 109.217 1.00 68.96 O
ATOM 9 C3' U B 577 -10.885 93.166 107.876 1.00 71.15 C
ATOM 10 O3' U B 577 -11.822 93.831 107.038 1.00 72.00 O
ATOM 11 C2' U B 577 -10.926 93.622 109.331 1.00 70.96 C
ATOM 12 O2' U B 577 -12.228 93.911 109.795 1.00 72.56 O
ATOM 13 C1' U B 577 -10.374 92.389 110.057 1.00 69.88 C
ATOM 14 N1 U B 577 -8.941 92.457 110.386 1.00 69.59 N
ATOM 15 C2 U B 577 -8.532 93.347 111.368 1.00 69.78 C
ATOM 16 O2 U B 577 -9.301 94.069 111.975 1.00 69.32 O
ATOM 17 N3 U B 577 -7.182 93.353 111.615 1.00 69.51 N
ATOM 18 C4 U B 577 -6.218 92.576 111.000 1.00 69.94 C
ATOM 19 O4 U B 577 -5.037 92.709 111.321 1.00 70.90 O
ATOM 20 C5 U B 577 -6.719 91.680 110.007 1.00 69.63 C
ATOM 21 C6 U B 577 -8.028 91.654 109.738 1.00 69.89 C
ATOM 22 P A B 578 -11.410 95.210 106.330 1.00 74.17 P
ATOM 23 OP1 A B 578 -12.556 95.713 105.527 1.00 74.11 O
ATOM 24 OP2 A B 578 -10.096 94.984 105.670 1.00 75.40 O
ATOM 25 O5' A B 578 -11.208 96.199 107.558 1.00 69.65 O
TER

Atoms:
OP1: (-10.564,84.932,110.099)
OP2: (-8.132,84.324,110.627)
C3': (-7.481,88.102,106.642)
C1': (-5.407,88.488,107.650)
C5': (-7.484,85.898,108.033)
O6: (0.184,87.833,109.636)
O4': (-6.225,87.874,108.620)
C8: (-3.401,86.934,107.467)
C2: (-2.353,90.273,110.073)
C6: (-0.917,88.375,109.502)
C5: (-2.024,87.946,108.734)
C4: (-3.156,88.721,108.723)
P: (-9.122,85.233,109.996)
C4': (-7.446,87.413,108.000)
C2': (-6.001,88.127,106.290)
O2': (-5.671,89.103,105.326)
N1: (-1.182,89.573,110.155)
N2: (-2.408,91.417,110.767)
N3: (-3.391,89.886,109.361)
N7: (-2.189,86.819,107.937)
N9: (-4.043,88.061,107.918)
O5': (-8.783,85.436,108.451)
O3': (-7.957,89.422,106.924)
C4: (-6.218,92.576,111.000)
N3: (-7.182,93.353,111.615)
OP1: (-8.865,89.710,104.599)
OP2: (-7.066,91.301,105.517)
C2: (-8.532,93.347,111.368)
C1': (-10.374,92.389,110.057)
C3': (-10.885,93.166,107.876)
O5': (-9.382,91.405,106.377)
O4': (-10.583,91.264,109.217)
C5': (-10.657,90.875,106.814)
P: (-8.270,90.459,105.738)
C4': (-11.191,91.687,107.972)
C2': (-10.926,93.622,109.331)
O2': (-12.228,93.911,109.795)
N1: (-8.941,92.457,110.386)
O4: (-5.037,92.709,111.321)
O2: (-9.301,94.069,111.975)
C6: (-8.028,91.654,109.738)
C5: (-6.719,91.680,110.007)
O3': (-11.822,93.831,107.038)
Image (generated by PyMOL):
PyMOL image
show in jmol