Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:I24:I25
Extra
PDB:
ATOM 1 O3' A A 23 -10.732 3.000 63.811 1.00 49.77 O
ATOM 2 P G A 24 -10.268 4.507 64.066 1.00 45.27 P
ATOM 3 OP1 G A 24 -11.071 4.964 65.229 1.00 45.11 O
ATOM 4 OP2 G A 24 -10.350 5.272 62.795 1.00 44.58 O
ATOM 5 O5' G A 24 -8.753 4.312 64.470 1.00 43.57 O
ATOM 6 C5' G A 24 -7.898 3.523 63.672 1.00 44.78 C
ATOM 7 C4' G A 24 -6.501 3.610 64.196 1.00 43.16 C
ATOM 8 O4' G A 24 -5.653 2.795 63.352 1.00 45.27 O
ATOM 9 C3' G A 24 -5.930 5.015 64.150 1.00 39.46 C
ATOM 10 O3' G A 24 -4.871 5.109 65.106 1.00 37.66 O
ATOM 11 C2' G A 24 -5.365 5.002 62.744 1.00 40.30 C
ATOM 12 O2' G A 24 -4.461 6.041 62.458 1.00 38.17 O
ATOM 13 C1' G A 24 -4.711 3.628 62.731 1.00 43.60 C
ATOM 14 N9 G A 24 -4.437 3.097 61.399 1.00 46.31 N
ATOM 15 C8 G A 24 -5.065 3.451 60.233 1.00 47.51 C
ATOM 16 N7 G A 24 -4.609 2.815 59.183 1.00 50.21 N
ATOM 17 C5 G A 24 -3.611 1.992 59.684 1.00 49.17 C
ATOM 18 C6 G A 24 -2.771 1.073 59.012 1.00 49.41 C
ATOM 19 O6 G A 24 -2.738 0.800 57.802 1.00 50.20 O
ATOM 20 N1 G A 24 -1.911 0.446 59.901 1.00 48.88 N
ATOM 21 C2 G A 24 -1.868 0.674 61.249 1.00 48.08 C
ATOM 22 N2 G A 24 -0.965 -0.026 61.941 1.00 48.29 N
ATOM 23 N3 G A 24 -2.642 1.529 61.887 1.00 47.47 N
ATOM 24 C4 G A 24 -3.490 2.156 61.049 1.00 48.11 C
ATOM 25 P U A 25 -3.988 6.434 65.414 1.00 35.98 P
ATOM 26 OP1 U A 25 -5.046 7.464 65.456 1.00 33.10 O
ATOM 27 OP2 U A 25 -2.820 6.615 64.522 1.00 37.39 O
ATOM 28 O5' U A 25 -3.402 6.187 66.867 1.00 37.47 O
TER
ATOM 1 O3' G B 24 -4.871 5.109 65.106 1.00 37.66 O
ATOM 2 P U B 25 -3.988 6.434 65.414 1.00 35.98 P
ATOM 3 OP1 U B 25 -5.046 7.464 65.456 1.00 33.10 O
ATOM 4 OP2 U B 25 -2.820 6.615 64.522 1.00 37.39 O
ATOM 5 O5' U B 25 -3.402 6.187 66.867 1.00 37.47 O
ATOM 6 C5' U B 25 -4.163 6.440 68.036 1.00 38.20 C
ATOM 7 C4' U B 25 -4.238 5.233 68.930 1.00 41.14 C
ATOM 8 O4' U B 25 -4.697 4.100 68.146 1.00 42.45 O
ATOM 9 C3' U B 25 -2.929 4.745 69.543 1.00 40.90 C
ATOM 10 O3' U B 25 -2.496 5.494 70.668 1.00 39.64 O
ATOM 11 C2' U B 25 -3.245 3.282 69.840 1.00 41.84 C
ATOM 12 O2' U B 25 -4.093 3.151 70.969 1.00 40.60 O
ATOM 13 C1' U B 25 -4.084 2.913 68.616 1.00 42.54 C
ATOM 14 N1 U B 25 -3.251 2.226 67.604 1.00 43.73 N
ATOM 15 C2 U B 25 -2.943 0.968 67.943 1.00 44.52 C
ATOM 16 O2 U B 25 -3.360 0.531 68.979 1.00 44.17 O
ATOM 17 N3 U B 25 -2.167 0.275 67.074 1.00 45.80 N
ATOM 18 C4 U B 25 -1.677 0.723 65.885 1.00 46.24 C
ATOM 19 O4 U B 25 -0.995 -0.026 65.195 1.00 47.42 O
ATOM 20 C5 U B 25 -2.030 2.064 65.581 1.00 45.19 C
ATOM 21 C6 U B 25 -2.788 2.753 66.436 1.00 44.07 C
ATOM 22 P G B 26 -1.000 6.065 70.708 1.00 39.82 P
ATOM 23 OP1 G B 26 -0.983 7.208 71.630 1.00 38.43 O
ATOM 24 OP2 G B 26 -0.542 6.291 69.330 1.00 40.64 O
ATOM 25 O5' G B 26 -0.192 4.832 71.278 1.00 41.44 O
TER
ATOM 2 P G A 24 -10.268 4.507 64.066 1.00 45.27 P
ATOM 3 OP1 G A 24 -11.071 4.964 65.229 1.00 45.11 O
ATOM 4 OP2 G A 24 -10.350 5.272 62.795 1.00 44.58 O
ATOM 5 O5' G A 24 -8.753 4.312 64.470 1.00 43.57 O
ATOM 6 C5' G A 24 -7.898 3.523 63.672 1.00 44.78 C
ATOM 7 C4' G A 24 -6.501 3.610 64.196 1.00 43.16 C
ATOM 8 O4' G A 24 -5.653 2.795 63.352 1.00 45.27 O
ATOM 9 C3' G A 24 -5.930 5.015 64.150 1.00 39.46 C
ATOM 10 O3' G A 24 -4.871 5.109 65.106 1.00 37.66 O
ATOM 11 C2' G A 24 -5.365 5.002 62.744 1.00 40.30 C
ATOM 12 O2' G A 24 -4.461 6.041 62.458 1.00 38.17 O
ATOM 13 C1' G A 24 -4.711 3.628 62.731 1.00 43.60 C
ATOM 14 N9 G A 24 -4.437 3.097 61.399 1.00 46.31 N
ATOM 15 C8 G A 24 -5.065 3.451 60.233 1.00 47.51 C
ATOM 16 N7 G A 24 -4.609 2.815 59.183 1.00 50.21 N
ATOM 17 C5 G A 24 -3.611 1.992 59.684 1.00 49.17 C
ATOM 18 C6 G A 24 -2.771 1.073 59.012 1.00 49.41 C
ATOM 19 O6 G A 24 -2.738 0.800 57.802 1.00 50.20 O
ATOM 20 N1 G A 24 -1.911 0.446 59.901 1.00 48.88 N
ATOM 21 C2 G A 24 -1.868 0.674 61.249 1.00 48.08 C
ATOM 22 N2 G A 24 -0.965 -0.026 61.941 1.00 48.29 N
ATOM 23 N3 G A 24 -2.642 1.529 61.887 1.00 47.47 N
ATOM 24 C4 G A 24 -3.490 2.156 61.049 1.00 48.11 C
ATOM 25 P U A 25 -3.988 6.434 65.414 1.00 35.98 P
ATOM 26 OP1 U A 25 -5.046 7.464 65.456 1.00 33.10 O
ATOM 27 OP2 U A 25 -2.820 6.615 64.522 1.00 37.39 O
ATOM 28 O5' U A 25 -3.402 6.187 66.867 1.00 37.47 O
TER
ATOM 1 O3' G B 24 -4.871 5.109 65.106 1.00 37.66 O
ATOM 2 P U B 25 -3.988 6.434 65.414 1.00 35.98 P
ATOM 3 OP1 U B 25 -5.046 7.464 65.456 1.00 33.10 O
ATOM 4 OP2 U B 25 -2.820 6.615 64.522 1.00 37.39 O
ATOM 5 O5' U B 25 -3.402 6.187 66.867 1.00 37.47 O
ATOM 6 C5' U B 25 -4.163 6.440 68.036 1.00 38.20 C
ATOM 7 C4' U B 25 -4.238 5.233 68.930 1.00 41.14 C
ATOM 8 O4' U B 25 -4.697 4.100 68.146 1.00 42.45 O
ATOM 9 C3' U B 25 -2.929 4.745 69.543 1.00 40.90 C
ATOM 10 O3' U B 25 -2.496 5.494 70.668 1.00 39.64 O
ATOM 11 C2' U B 25 -3.245 3.282 69.840 1.00 41.84 C
ATOM 12 O2' U B 25 -4.093 3.151 70.969 1.00 40.60 O
ATOM 13 C1' U B 25 -4.084 2.913 68.616 1.00 42.54 C
ATOM 14 N1 U B 25 -3.251 2.226 67.604 1.00 43.73 N
ATOM 15 C2 U B 25 -2.943 0.968 67.943 1.00 44.52 C
ATOM 16 O2 U B 25 -3.360 0.531 68.979 1.00 44.17 O
ATOM 17 N3 U B 25 -2.167 0.275 67.074 1.00 45.80 N
ATOM 18 C4 U B 25 -1.677 0.723 65.885 1.00 46.24 C
ATOM 19 O4 U B 25 -0.995 -0.026 65.195 1.00 47.42 O
ATOM 20 C5 U B 25 -2.030 2.064 65.581 1.00 45.19 C
ATOM 21 C6 U B 25 -2.788 2.753 66.436 1.00 44.07 C
ATOM 22 P G B 26 -1.000 6.065 70.708 1.00 39.82 P
ATOM 23 OP1 G B 26 -0.983 7.208 71.630 1.00 38.43 O
ATOM 24 OP2 G B 26 -0.542 6.291 69.330 1.00 40.64 O
ATOM 25 O5' G B 26 -0.192 4.832 71.278 1.00 41.44 O
TER
Atoms:
OP1: (-11.071,4.964,65.229)
OP2: (-10.350,5.272,62.795)
C3': (-5.930,5.015,64.150)
C1': (-4.711,3.628,62.731)
C5': (-7.898,3.523,63.672)
O6: (-2.738,0.800,57.802)
O4': (-5.653,2.795,63.352)
C8: (-5.065,3.451,60.233)
C2: (-1.868,0.674,61.249)
C6: (-2.771,1.073,59.012)
C5: (-3.611,1.992,59.684)
C4: (-3.490,2.156,61.049)
P: (-10.268,4.507,64.066)
C4': (-6.501,3.610,64.196)
C2': (-5.365,5.002,62.744)
O2': (-4.461,6.041,62.458)
N1: (-1.911,0.446,59.901)
N2: (-0.965,-0.026,61.941)
N3: (-2.642,1.529,61.887)
N7: (-4.609,2.815,59.183)
N9: (-4.437,3.097,61.399)
O5': (-8.753,4.312,64.470)
O3': (-4.871,5.109,65.106)
OP2: (-10.350,5.272,62.795)
C3': (-5.930,5.015,64.150)
C1': (-4.711,3.628,62.731)
C5': (-7.898,3.523,63.672)
O6: (-2.738,0.800,57.802)
O4': (-5.653,2.795,63.352)
C8: (-5.065,3.451,60.233)
C2: (-1.868,0.674,61.249)
C6: (-2.771,1.073,59.012)
C5: (-3.611,1.992,59.684)
C4: (-3.490,2.156,61.049)
P: (-10.268,4.507,64.066)
C4': (-6.501,3.610,64.196)
C2': (-5.365,5.002,62.744)
O2': (-4.461,6.041,62.458)
N1: (-1.911,0.446,59.901)
N2: (-0.965,-0.026,61.941)
N3: (-2.642,1.529,61.887)
N7: (-4.609,2.815,59.183)
N9: (-4.437,3.097,61.399)
O5': (-8.753,4.312,64.470)
O3': (-4.871,5.109,65.106)
C4: (-1.677,0.723,65.885)
N3: (-2.167,0.275,67.074)
OP1: (-5.046,7.464,65.456)
OP2: (-2.820,6.615,64.522)
C2: (-2.943,0.968,67.943)
C1': (-4.084,2.913,68.616)
C3': (-2.929,4.745,69.543)
O5': (-3.402,6.187,66.867)
O4': (-4.697,4.100,68.146)
C5': (-4.163,6.440,68.036)
P: (-3.988,6.434,65.414)
C4': (-4.238,5.233,68.930)
C2': (-3.245,3.282,69.840)
O2': (-4.093,3.151,70.969)
N1: (-3.251,2.226,67.604)
O4: (-0.995,-0.026,65.195)
O2: (-3.360,0.531,68.979)
C6: (-2.788,2.753,66.436)
C5: (-2.030,2.064,65.581)
O3': (-2.496,5.494,70.668)
N3: (-2.167,0.275,67.074)
OP1: (-5.046,7.464,65.456)
OP2: (-2.820,6.615,64.522)
C2: (-2.943,0.968,67.943)
C1': (-4.084,2.913,68.616)
C3': (-2.929,4.745,69.543)
O5': (-3.402,6.187,66.867)
O4': (-4.697,4.100,68.146)
C5': (-4.163,6.440,68.036)
P: (-3.988,6.434,65.414)
C4': (-4.238,5.233,68.930)
C2': (-3.245,3.282,69.840)
O2': (-4.093,3.151,70.969)
N1: (-3.251,2.226,67.604)
O4: (-0.995,-0.026,65.195)
O2: (-3.360,0.531,68.979)
C6: (-2.788,2.753,66.436)
C5: (-2.030,2.064,65.581)
O3': (-2.496,5.494,70.668)
Image (generated by PyMOL):