Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11208:11209
Extra
PDB:
ATOM 1 O3' A A1207 -9.607 -8.364 -22.986 1.00235.30 O
ATOM 2 P G A1208 -9.499 -8.405 -21.379 1.00264.69 P
ATOM 3 OP1 G A1208 -9.506 -9.833 -20.976 1.00264.84 O
ATOM 4 OP2 G A1208 -10.557 -7.510 -20.849 1.00265.44 O
ATOM 5 O5' G A1208 -8.063 -7.771 -21.102 1.00263.50 O
ATOM 6 C5' G A1208 -7.748 -7.204 -19.835 1.00263.21 C
ATOM 7 C4' G A1208 -6.484 -6.379 -19.885 1.00262.13 C
ATOM 8 O4' G A1208 -6.292 -5.881 -21.237 1.00261.92 O
ATOM 9 C3' G A1208 -6.478 -5.155 -18.977 1.00262.02 C
ATOM 10 O3' G A1208 -5.149 -4.902 -18.529 1.00260.96 O
ATOM 11 C2' G A1208 -6.926 -4.040 -19.915 1.00262.26 C
ATOM 12 O2' G A1208 -6.517 -2.746 -19.527 1.00261.82 O
ATOM 13 C1' G A1208 -6.288 -4.465 -21.236 1.00261.79 C
ATOM 14 N9 G A1208 -7.025 -4.012 -22.417 1.00262.31 N
ATOM 15 C8 G A1208 -7.884 -4.771 -23.172 1.00263.05 C
ATOM 16 N7 G A1208 -8.404 -4.115 -24.170 1.00263.39 N
ATOM 17 C5 G A1208 -7.856 -2.847 -24.079 1.00262.84 C
ATOM 18 C6 G A1208 -8.052 -1.702 -24.898 1.00262.88 C
ATOM 19 O6 G A1208 -8.772 -1.573 -25.898 1.00263.43 O
ATOM 20 N1 G A1208 -7.294 -0.627 -24.443 1.00262.19 N
ATOM 21 C2 G A1208 -6.459 -0.648 -23.349 1.00261.55 C
ATOM 22 N2 G A1208 -5.813 0.497 -23.076 1.00260.94 N
ATOM 23 N3 G A1208 -6.271 -1.710 -22.579 1.00261.51 N
ATOM 24 C4 G A1208 -6.992 -2.768 -23.004 1.00262.17 C
ATOM 25 P U A1209 -4.765 -5.128 -16.986 1.00227.05 P
ATOM 26 OP1 U A1209 -3.863 -6.308 -16.930 1.00226.46 O
ATOM 27 OP2 U A1209 -6.036 -5.170 -16.225 1.00228.06 O
ATOM 28 O5' U A1209 -3.954 -3.800 -16.621 1.00226.30 O
TER
ATOM 1 O3' G B1208 -5.149 -4.902 -18.529 1.00260.96 O
ATOM 2 P U B1209 -4.765 -5.128 -16.986 1.00227.05 P
ATOM 3 OP1 U B1209 -3.863 -6.308 -16.930 1.00226.46 O
ATOM 4 OP2 U B1209 -6.036 -5.170 -16.225 1.00228.06 O
ATOM 5 O5' U B1209 -3.954 -3.800 -16.621 1.00226.30 O
ATOM 6 C5' U B1209 -4.289 -3.022 -15.476 1.00226.50 C
ATOM 7 C4' U B1209 -3.227 -1.990 -15.168 1.00225.57 C
ATOM 8 O4' U B1209 -2.411 -1.759 -16.347 1.00224.90 O
ATOM 9 C3' U B1209 -3.730 -0.602 -14.788 1.00225.85 C
ATOM 10 O3' U B1209 -4.105 -0.497 -13.427 1.00226.15 O
ATOM 11 C2' U B1209 -2.560 0.293 -15.164 1.00224.84 C
ATOM 12 O2' U B1209 -1.542 0.228 -14.177 1.00224.06 O
ATOM 13 C1' U B1209 -2.050 -0.396 -16.427 1.00224.49 C
ATOM 14 N1 U B1209 -2.650 0.172 -17.650 1.00224.90 N
ATOM 15 C2 U B1209 -2.214 1.412 -18.078 1.00224.45 C
ATOM 16 O2 U B1209 -1.365 2.067 -17.492 1.00223.73 O
ATOM 17 N3 U B1209 -2.822 1.859 -19.226 1.00224.87 N
ATOM 18 C4 U B1209 -3.789 1.210 -19.969 1.00225.68 C
ATOM 19 O4 U B1209 -4.236 1.747 -20.983 1.00225.97 O
ATOM 20 C5 U B1209 -4.180 -0.067 -19.459 1.00226.11 C
ATOM 21 C6 U B1209 -3.608 -0.528 -18.346 1.00225.71 C
ATOM 22 P G B1210 -5.593 -0.887 -12.967 1.00227.81 P
ATOM 23 OP1 G B1210 -5.502 -2.205 -12.288 1.00227.87 O
ATOM 24 OP2 G B1210 -6.470 -0.755 -14.160 1.00228.48 O
ATOM 25 O5' G B1210 -5.947 0.248 -11.906 1.00228.00 O
TER
ATOM 2 P G A1208 -9.499 -8.405 -21.379 1.00264.69 P
ATOM 3 OP1 G A1208 -9.506 -9.833 -20.976 1.00264.84 O
ATOM 4 OP2 G A1208 -10.557 -7.510 -20.849 1.00265.44 O
ATOM 5 O5' G A1208 -8.063 -7.771 -21.102 1.00263.50 O
ATOM 6 C5' G A1208 -7.748 -7.204 -19.835 1.00263.21 C
ATOM 7 C4' G A1208 -6.484 -6.379 -19.885 1.00262.13 C
ATOM 8 O4' G A1208 -6.292 -5.881 -21.237 1.00261.92 O
ATOM 9 C3' G A1208 -6.478 -5.155 -18.977 1.00262.02 C
ATOM 10 O3' G A1208 -5.149 -4.902 -18.529 1.00260.96 O
ATOM 11 C2' G A1208 -6.926 -4.040 -19.915 1.00262.26 C
ATOM 12 O2' G A1208 -6.517 -2.746 -19.527 1.00261.82 O
ATOM 13 C1' G A1208 -6.288 -4.465 -21.236 1.00261.79 C
ATOM 14 N9 G A1208 -7.025 -4.012 -22.417 1.00262.31 N
ATOM 15 C8 G A1208 -7.884 -4.771 -23.172 1.00263.05 C
ATOM 16 N7 G A1208 -8.404 -4.115 -24.170 1.00263.39 N
ATOM 17 C5 G A1208 -7.856 -2.847 -24.079 1.00262.84 C
ATOM 18 C6 G A1208 -8.052 -1.702 -24.898 1.00262.88 C
ATOM 19 O6 G A1208 -8.772 -1.573 -25.898 1.00263.43 O
ATOM 20 N1 G A1208 -7.294 -0.627 -24.443 1.00262.19 N
ATOM 21 C2 G A1208 -6.459 -0.648 -23.349 1.00261.55 C
ATOM 22 N2 G A1208 -5.813 0.497 -23.076 1.00260.94 N
ATOM 23 N3 G A1208 -6.271 -1.710 -22.579 1.00261.51 N
ATOM 24 C4 G A1208 -6.992 -2.768 -23.004 1.00262.17 C
ATOM 25 P U A1209 -4.765 -5.128 -16.986 1.00227.05 P
ATOM 26 OP1 U A1209 -3.863 -6.308 -16.930 1.00226.46 O
ATOM 27 OP2 U A1209 -6.036 -5.170 -16.225 1.00228.06 O
ATOM 28 O5' U A1209 -3.954 -3.800 -16.621 1.00226.30 O
TER
ATOM 1 O3' G B1208 -5.149 -4.902 -18.529 1.00260.96 O
ATOM 2 P U B1209 -4.765 -5.128 -16.986 1.00227.05 P
ATOM 3 OP1 U B1209 -3.863 -6.308 -16.930 1.00226.46 O
ATOM 4 OP2 U B1209 -6.036 -5.170 -16.225 1.00228.06 O
ATOM 5 O5' U B1209 -3.954 -3.800 -16.621 1.00226.30 O
ATOM 6 C5' U B1209 -4.289 -3.022 -15.476 1.00226.50 C
ATOM 7 C4' U B1209 -3.227 -1.990 -15.168 1.00225.57 C
ATOM 8 O4' U B1209 -2.411 -1.759 -16.347 1.00224.90 O
ATOM 9 C3' U B1209 -3.730 -0.602 -14.788 1.00225.85 C
ATOM 10 O3' U B1209 -4.105 -0.497 -13.427 1.00226.15 O
ATOM 11 C2' U B1209 -2.560 0.293 -15.164 1.00224.84 C
ATOM 12 O2' U B1209 -1.542 0.228 -14.177 1.00224.06 O
ATOM 13 C1' U B1209 -2.050 -0.396 -16.427 1.00224.49 C
ATOM 14 N1 U B1209 -2.650 0.172 -17.650 1.00224.90 N
ATOM 15 C2 U B1209 -2.214 1.412 -18.078 1.00224.45 C
ATOM 16 O2 U B1209 -1.365 2.067 -17.492 1.00223.73 O
ATOM 17 N3 U B1209 -2.822 1.859 -19.226 1.00224.87 N
ATOM 18 C4 U B1209 -3.789 1.210 -19.969 1.00225.68 C
ATOM 19 O4 U B1209 -4.236 1.747 -20.983 1.00225.97 O
ATOM 20 C5 U B1209 -4.180 -0.067 -19.459 1.00226.11 C
ATOM 21 C6 U B1209 -3.608 -0.528 -18.346 1.00225.71 C
ATOM 22 P G B1210 -5.593 -0.887 -12.967 1.00227.81 P
ATOM 23 OP1 G B1210 -5.502 -2.205 -12.288 1.00227.87 O
ATOM 24 OP2 G B1210 -6.470 -0.755 -14.160 1.00228.48 O
ATOM 25 O5' G B1210 -5.947 0.248 -11.906 1.00228.00 O
TER
Atoms:
OP1: (-9.506,-9.833,-20.976)
OP2: (-10.557,-7.510,-20.849)
C3': (-6.478,-5.155,-18.977)
C1': (-6.288,-4.465,-21.236)
C5': (-7.748,-7.204,-19.835)
O6: (-8.772,-1.573,-25.898)
O4': (-6.292,-5.881,-21.237)
C8: (-7.884,-4.771,-23.172)
C2: (-6.459,-0.648,-23.349)
C6: (-8.052,-1.702,-24.898)
C5: (-7.856,-2.847,-24.079)
C4: (-6.992,-2.768,-23.004)
P: (-9.499,-8.405,-21.379)
C4': (-6.484,-6.379,-19.885)
C2': (-6.926,-4.040,-19.915)
O2': (-6.517,-2.746,-19.527)
N1: (-7.294,-0.627,-24.443)
N2: (-5.813,0.497,-23.076)
N3: (-6.271,-1.710,-22.579)
N7: (-8.404,-4.115,-24.170)
N9: (-7.025,-4.012,-22.417)
O5': (-8.063,-7.771,-21.102)
O3': (-5.149,-4.902,-18.529)
OP2: (-10.557,-7.510,-20.849)
C3': (-6.478,-5.155,-18.977)
C1': (-6.288,-4.465,-21.236)
C5': (-7.748,-7.204,-19.835)
O6: (-8.772,-1.573,-25.898)
O4': (-6.292,-5.881,-21.237)
C8: (-7.884,-4.771,-23.172)
C2: (-6.459,-0.648,-23.349)
C6: (-8.052,-1.702,-24.898)
C5: (-7.856,-2.847,-24.079)
C4: (-6.992,-2.768,-23.004)
P: (-9.499,-8.405,-21.379)
C4': (-6.484,-6.379,-19.885)
C2': (-6.926,-4.040,-19.915)
O2': (-6.517,-2.746,-19.527)
N1: (-7.294,-0.627,-24.443)
N2: (-5.813,0.497,-23.076)
N3: (-6.271,-1.710,-22.579)
N7: (-8.404,-4.115,-24.170)
N9: (-7.025,-4.012,-22.417)
O5': (-8.063,-7.771,-21.102)
O3': (-5.149,-4.902,-18.529)
C4: (-3.789,1.210,-19.969)
N3: (-2.822,1.859,-19.226)
OP1: (-3.863,-6.308,-16.930)
OP2: (-6.036,-5.170,-16.225)
C2: (-2.214,1.412,-18.078)
C1': (-2.050,-0.396,-16.427)
C3': (-3.730,-0.602,-14.788)
O5': (-3.954,-3.800,-16.621)
O4': (-2.411,-1.759,-16.347)
C5': (-4.289,-3.022,-15.476)
P: (-4.765,-5.128,-16.986)
C4': (-3.227,-1.990,-15.168)
C2': (-2.560,0.293,-15.164)
O2': (-1.542,0.228,-14.177)
N1: (-2.650,0.172,-17.650)
O4: (-4.236,1.747,-20.983)
O2: (-1.365,2.067,-17.492)
C6: (-3.608,-0.528,-18.346)
C5: (-4.180,-0.067,-19.459)
O3': (-4.105,-0.497,-13.427)
N3: (-2.822,1.859,-19.226)
OP1: (-3.863,-6.308,-16.930)
OP2: (-6.036,-5.170,-16.225)
C2: (-2.214,1.412,-18.078)
C1': (-2.050,-0.396,-16.427)
C3': (-3.730,-0.602,-14.788)
O5': (-3.954,-3.800,-16.621)
O4': (-2.411,-1.759,-16.347)
C5': (-4.289,-3.022,-15.476)
P: (-4.765,-5.128,-16.986)
C4': (-3.227,-1.990,-15.168)
C2': (-2.560,0.293,-15.164)
O2': (-1.542,0.228,-14.177)
N1: (-2.650,0.172,-17.650)
O4: (-4.236,1.747,-20.983)
O2: (-1.365,2.067,-17.492)
C6: (-3.608,-0.528,-18.346)
C5: (-4.180,-0.067,-19.459)
O3': (-4.105,-0.497,-13.427)
Image (generated by PyMOL):