Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B48:B49
Extra
PDB:
ATOM 1 O3' C A 47 -17.695 -25.807 6.745 1.00 44.87 O
ATOM 2 P G A 48 -17.147 -27.315 6.775 1.00 46.64 P
ATOM 3 OP1 G A 48 -18.189 -28.157 6.136 1.00 45.94 O
ATOM 4 OP2 G A 48 -16.744 -27.601 8.175 1.00 44.24 O
ATOM 5 O5' G A 48 -15.863 -27.218 5.844 1.00 47.12 O
ATOM 6 C5' G A 48 -15.406 -28.351 5.110 1.00 48.30 C
ATOM 7 C4' G A 48 -13.988 -28.133 4.640 1.00 49.12 C
ATOM 8 O4' G A 48 -13.133 -27.955 5.802 1.00 47.49 O
ATOM 9 C3' G A 48 -13.374 -29.271 3.834 1.00 49.54 C
ATOM 10 O3' G A 48 -12.454 -28.669 2.942 1.00 51.23 O
ATOM 11 C2' G A 48 -12.587 -30.047 4.887 1.00 48.52 C
ATOM 12 O2' G A 48 -11.536 -30.825 4.365 1.00 49.20 O
ATOM 13 C1' G A 48 -12.088 -28.909 5.768 1.00 47.37 C
ATOM 14 N9 G A 48 -11.788 -29.273 7.151 1.00 46.01 N
ATOM 15 C8 G A 48 -12.404 -30.240 7.908 1.00 45.37 C
ATOM 16 N7 G A 48 -11.915 -30.330 9.115 1.00 44.07 N
ATOM 17 C5 G A 48 -10.919 -29.364 9.155 1.00 43.75 C
ATOM 18 C6 G A 48 -10.041 -28.995 10.205 1.00 43.51 C
ATOM 19 O6 G A 48 -9.969 -29.464 11.345 1.00 43.52 O
ATOM 20 N1 G A 48 -9.184 -27.967 9.822 1.00 43.21 N
ATOM 21 C2 G A 48 -9.172 -27.368 8.588 1.00 43.65 C
ATOM 22 N2 G A 48 -8.268 -26.393 8.414 1.00 42.99 N
ATOM 23 N3 G A 48 -9.986 -27.704 7.599 1.00 44.68 N
ATOM 24 C4 G A 48 -10.826 -28.703 7.951 1.00 44.61 C
ATOM 25 P U A 49 -12.193 -29.229 1.462 1.00 54.60 P
ATOM 26 OP1 U A 49 -13.385 -30.022 1.061 1.00 52.05 O
ATOM 27 OP2 U A 49 -10.853 -29.871 1.485 1.00 53.46 O
ATOM 28 O5' U A 49 -12.123 -27.856 0.662 1.00 54.63 O
TER
ATOM 1 O3' G B 48 -12.454 -28.669 2.942 1.00 51.23 O
ATOM 2 P U B 49 -12.193 -29.229 1.462 1.00 54.60 P
ATOM 3 OP1 U B 49 -13.385 -30.022 1.061 1.00 52.05 O
ATOM 4 OP2 U B 49 -10.853 -29.871 1.485 1.00 53.46 O
ATOM 5 O5' U B 49 -12.123 -27.856 0.662 1.00 54.63 O
ATOM 6 C5' U B 49 -13.314 -27.147 0.330 1.00 54.15 C
ATOM 7 C4' U B 49 -13.067 -25.655 0.294 1.00 53.73 C
ATOM 8 O4' U B 49 -12.737 -25.157 1.625 1.00 52.53 O
ATOM 9 C3' U B 49 -11.942 -25.192 -0.630 1.00 54.45 C
ATOM 10 O3' U B 49 -12.291 -23.919 -1.134 1.00 55.71 O
ATOM 11 C2' U B 49 -10.775 -24.975 0.327 1.00 53.73 C
ATOM 12 O2' U B 49 -9.813 -24.059 -0.137 1.00 54.54 O
ATOM 13 C1' U B 49 -11.512 -24.442 1.546 1.00 52.21 C
ATOM 14 N1 U B 49 -10.784 -24.531 2.813 1.00 51.06 N
ATOM 15 C2 U B 49 -10.013 -23.438 3.163 1.00 50.71 C
ATOM 16 O2 U B 49 -9.925 -22.439 2.465 1.00 50.85 O
ATOM 17 N3 U B 49 -9.347 -23.558 4.356 1.00 48.73 N
ATOM 18 C4 U B 49 -9.377 -24.637 5.215 1.00 46.82 C
ATOM 19 O4 U B 49 -8.720 -24.594 6.257 1.00 45.76 O
ATOM 20 C5 U B 49 -10.201 -25.726 4.783 1.00 47.05 C
ATOM 21 C6 U B 49 -10.861 -25.639 3.623 1.00 49.37 C
ATOM 22 P A B 50 -12.198 -23.578 -2.698 1.00 57.84 P
ATOM 23 OP1 A B 50 -12.091 -24.863 -3.440 1.00 56.30 O
ATOM 24 OP2 A B 50 -11.135 -22.551 -2.852 1.00 54.61 O
ATOM 25 O5' A B 50 -13.633 -22.928 -2.890 1.00 56.96 O
TER
ATOM 2 P G A 48 -17.147 -27.315 6.775 1.00 46.64 P
ATOM 3 OP1 G A 48 -18.189 -28.157 6.136 1.00 45.94 O
ATOM 4 OP2 G A 48 -16.744 -27.601 8.175 1.00 44.24 O
ATOM 5 O5' G A 48 -15.863 -27.218 5.844 1.00 47.12 O
ATOM 6 C5' G A 48 -15.406 -28.351 5.110 1.00 48.30 C
ATOM 7 C4' G A 48 -13.988 -28.133 4.640 1.00 49.12 C
ATOM 8 O4' G A 48 -13.133 -27.955 5.802 1.00 47.49 O
ATOM 9 C3' G A 48 -13.374 -29.271 3.834 1.00 49.54 C
ATOM 10 O3' G A 48 -12.454 -28.669 2.942 1.00 51.23 O
ATOM 11 C2' G A 48 -12.587 -30.047 4.887 1.00 48.52 C
ATOM 12 O2' G A 48 -11.536 -30.825 4.365 1.00 49.20 O
ATOM 13 C1' G A 48 -12.088 -28.909 5.768 1.00 47.37 C
ATOM 14 N9 G A 48 -11.788 -29.273 7.151 1.00 46.01 N
ATOM 15 C8 G A 48 -12.404 -30.240 7.908 1.00 45.37 C
ATOM 16 N7 G A 48 -11.915 -30.330 9.115 1.00 44.07 N
ATOM 17 C5 G A 48 -10.919 -29.364 9.155 1.00 43.75 C
ATOM 18 C6 G A 48 -10.041 -28.995 10.205 1.00 43.51 C
ATOM 19 O6 G A 48 -9.969 -29.464 11.345 1.00 43.52 O
ATOM 20 N1 G A 48 -9.184 -27.967 9.822 1.00 43.21 N
ATOM 21 C2 G A 48 -9.172 -27.368 8.588 1.00 43.65 C
ATOM 22 N2 G A 48 -8.268 -26.393 8.414 1.00 42.99 N
ATOM 23 N3 G A 48 -9.986 -27.704 7.599 1.00 44.68 N
ATOM 24 C4 G A 48 -10.826 -28.703 7.951 1.00 44.61 C
ATOM 25 P U A 49 -12.193 -29.229 1.462 1.00 54.60 P
ATOM 26 OP1 U A 49 -13.385 -30.022 1.061 1.00 52.05 O
ATOM 27 OP2 U A 49 -10.853 -29.871 1.485 1.00 53.46 O
ATOM 28 O5' U A 49 -12.123 -27.856 0.662 1.00 54.63 O
TER
ATOM 1 O3' G B 48 -12.454 -28.669 2.942 1.00 51.23 O
ATOM 2 P U B 49 -12.193 -29.229 1.462 1.00 54.60 P
ATOM 3 OP1 U B 49 -13.385 -30.022 1.061 1.00 52.05 O
ATOM 4 OP2 U B 49 -10.853 -29.871 1.485 1.00 53.46 O
ATOM 5 O5' U B 49 -12.123 -27.856 0.662 1.00 54.63 O
ATOM 6 C5' U B 49 -13.314 -27.147 0.330 1.00 54.15 C
ATOM 7 C4' U B 49 -13.067 -25.655 0.294 1.00 53.73 C
ATOM 8 O4' U B 49 -12.737 -25.157 1.625 1.00 52.53 O
ATOM 9 C3' U B 49 -11.942 -25.192 -0.630 1.00 54.45 C
ATOM 10 O3' U B 49 -12.291 -23.919 -1.134 1.00 55.71 O
ATOM 11 C2' U B 49 -10.775 -24.975 0.327 1.00 53.73 C
ATOM 12 O2' U B 49 -9.813 -24.059 -0.137 1.00 54.54 O
ATOM 13 C1' U B 49 -11.512 -24.442 1.546 1.00 52.21 C
ATOM 14 N1 U B 49 -10.784 -24.531 2.813 1.00 51.06 N
ATOM 15 C2 U B 49 -10.013 -23.438 3.163 1.00 50.71 C
ATOM 16 O2 U B 49 -9.925 -22.439 2.465 1.00 50.85 O
ATOM 17 N3 U B 49 -9.347 -23.558 4.356 1.00 48.73 N
ATOM 18 C4 U B 49 -9.377 -24.637 5.215 1.00 46.82 C
ATOM 19 O4 U B 49 -8.720 -24.594 6.257 1.00 45.76 O
ATOM 20 C5 U B 49 -10.201 -25.726 4.783 1.00 47.05 C
ATOM 21 C6 U B 49 -10.861 -25.639 3.623 1.00 49.37 C
ATOM 22 P A B 50 -12.198 -23.578 -2.698 1.00 57.84 P
ATOM 23 OP1 A B 50 -12.091 -24.863 -3.440 1.00 56.30 O
ATOM 24 OP2 A B 50 -11.135 -22.551 -2.852 1.00 54.61 O
ATOM 25 O5' A B 50 -13.633 -22.928 -2.890 1.00 56.96 O
TER
Atoms:
OP1: (-18.189,-28.157,6.136)
OP2: (-16.744,-27.601,8.175)
C3': (-13.374,-29.271,3.834)
C1': (-12.088,-28.909,5.768)
C5': (-15.406,-28.351,5.110)
O6: (-9.969,-29.464,11.345)
O4': (-13.133,-27.955,5.802)
C8: (-12.404,-30.240,7.908)
C2: (-9.172,-27.368,8.588)
C6: (-10.041,-28.995,10.205)
C5: (-10.919,-29.364,9.155)
C4: (-10.826,-28.703,7.951)
P: (-17.147,-27.315,6.775)
C4': (-13.988,-28.133,4.640)
C2': (-12.587,-30.047,4.887)
O2': (-11.536,-30.825,4.365)
N1: (-9.184,-27.967,9.822)
N2: (-8.268,-26.393,8.414)
N3: (-9.986,-27.704,7.599)
N7: (-11.915,-30.330,9.115)
N9: (-11.788,-29.273,7.151)
O5': (-15.863,-27.218,5.844)
O3': (-12.454,-28.669,2.942)
OP2: (-16.744,-27.601,8.175)
C3': (-13.374,-29.271,3.834)
C1': (-12.088,-28.909,5.768)
C5': (-15.406,-28.351,5.110)
O6: (-9.969,-29.464,11.345)
O4': (-13.133,-27.955,5.802)
C8: (-12.404,-30.240,7.908)
C2: (-9.172,-27.368,8.588)
C6: (-10.041,-28.995,10.205)
C5: (-10.919,-29.364,9.155)
C4: (-10.826,-28.703,7.951)
P: (-17.147,-27.315,6.775)
C4': (-13.988,-28.133,4.640)
C2': (-12.587,-30.047,4.887)
O2': (-11.536,-30.825,4.365)
N1: (-9.184,-27.967,9.822)
N2: (-8.268,-26.393,8.414)
N3: (-9.986,-27.704,7.599)
N7: (-11.915,-30.330,9.115)
N9: (-11.788,-29.273,7.151)
O5': (-15.863,-27.218,5.844)
O3': (-12.454,-28.669,2.942)
C4: (-9.377,-24.637,5.215)
N3: (-9.347,-23.558,4.356)
OP1: (-13.385,-30.022,1.061)
OP2: (-10.853,-29.871,1.485)
C2: (-10.013,-23.438,3.163)
C1': (-11.512,-24.442,1.546)
C3': (-11.942,-25.192,-0.630)
O5': (-12.123,-27.856,0.662)
O4': (-12.737,-25.157,1.625)
C5': (-13.314,-27.147,0.330)
P: (-12.193,-29.229,1.462)
C4': (-13.067,-25.655,0.294)
C2': (-10.775,-24.975,0.327)
O2': (-9.813,-24.059,-0.137)
N1: (-10.784,-24.531,2.813)
O4: (-8.720,-24.594,6.257)
O2: (-9.925,-22.439,2.465)
C6: (-10.861,-25.639,3.623)
C5: (-10.201,-25.726,4.783)
O3': (-12.291,-23.919,-1.134)
N3: (-9.347,-23.558,4.356)
OP1: (-13.385,-30.022,1.061)
OP2: (-10.853,-29.871,1.485)
C2: (-10.013,-23.438,3.163)
C1': (-11.512,-24.442,1.546)
C3': (-11.942,-25.192,-0.630)
O5': (-12.123,-27.856,0.662)
O4': (-12.737,-25.157,1.625)
C5': (-13.314,-27.147,0.330)
P: (-12.193,-29.229,1.462)
C4': (-13.067,-25.655,0.294)
C2': (-10.775,-24.975,0.327)
O2': (-9.813,-24.059,-0.137)
N1: (-10.784,-24.531,2.813)
O4: (-8.720,-24.594,6.257)
O2: (-9.925,-22.439,2.465)
C6: (-10.861,-25.639,3.623)
C5: (-10.201,-25.726,4.783)
O3': (-12.291,-23.919,-1.134)
Image (generated by PyMOL):