Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0940:0941
Extra
PDB:
ATOM 1 O3' G A 939 54.464 63.711 100.035 1.00 50.31 O
ATOM 2 P G A 940 56.043 63.664 100.261 1.00 50.19 P
ATOM 3 OP1 G A 940 56.678 64.023 98.963 1.00 50.18 O
ATOM 4 OP2 G A 940 56.373 62.371 100.915 1.00 48.36 O
ATOM 5 O5' G A 940 56.292 64.859 101.275 1.00 50.84 O
ATOM 6 C5' G A 940 57.167 64.708 102.386 1.00 53.29 C
ATOM 7 C4' G A 940 56.474 65.152 103.644 1.00 53.52 C
ATOM 8 O4' G A 940 55.218 64.437 103.771 1.00 54.16 O
ATOM 9 C3' G A 940 57.250 64.880 104.922 1.00 53.61 C
ATOM 10 O3' G A 940 56.911 65.875 105.871 1.00 52.70 O
ATOM 11 C2' G A 940 56.688 63.536 105.359 1.00 54.47 C
ATOM 12 O2' G A 940 56.822 63.327 106.745 1.00 57.48 O
ATOM 13 C1' G A 940 55.220 63.689 104.969 1.00 55.71 C
ATOM 14 N9 G A 940 54.546 62.421 104.715 1.00 57.33 N
ATOM 15 C8 G A 940 54.921 61.461 103.809 1.00 58.74 C
ATOM 16 N7 G A 940 54.138 60.419 103.815 1.00 60.37 N
ATOM 17 C5 G A 940 53.185 60.707 104.784 1.00 60.32 C
ATOM 18 C6 G A 940 52.076 59.939 105.246 1.00 60.83 C
ATOM 19 O6 G A 940 51.718 58.803 104.895 1.00 61.96 O
ATOM 20 N1 G A 940 51.361 60.617 106.225 1.00 60.30 N
ATOM 21 C2 G A 940 51.673 61.857 106.710 1.00 58.84 C
ATOM 22 N2 G A 940 50.859 62.331 107.654 1.00 58.58 N
ATOM 23 N3 G A 940 52.706 62.577 106.301 1.00 58.61 N
ATOM 24 C4 G A 940 53.414 61.944 105.341 1.00 58.66 C
ATOM 25 P U A 941 57.718 67.261 105.893 1.00 53.09 P
ATOM 26 OP1 U A 941 57.946 67.682 104.486 1.00 50.92 O
ATOM 27 OP2 U A 941 58.871 67.142 106.820 1.00 52.61 O
ATOM 28 O5' U A 941 56.686 68.273 106.547 1.00 49.34 O
TER
ATOM 1 O3' G B 940 56.911 65.875 105.871 1.00 52.70 O
ATOM 2 P U B 941 57.718 67.261 105.893 1.00 53.09 P
ATOM 3 OP1 U B 941 57.946 67.682 104.486 1.00 50.92 O
ATOM 4 OP2 U B 941 58.871 67.142 106.820 1.00 52.61 O
ATOM 5 O5' U B 941 56.686 68.273 106.547 1.00 49.34 O
ATOM 6 C5' U B 941 56.739 69.653 106.216 1.00 46.16 C
ATOM 7 C4' U B 941 55.458 70.329 106.609 1.00 44.01 C
ATOM 8 O4' U B 941 54.334 69.732 105.909 1.00 44.24 O
ATOM 9 C3' U B 941 55.057 70.216 108.061 1.00 39.87 C
ATOM 10 O3' U B 941 55.800 71.122 108.836 1.00 37.86 O
ATOM 11 C2' U B 941 53.591 70.607 107.980 1.00 41.90 C
ATOM 12 O2' U B 941 53.411 71.999 107.799 1.00 40.55 O
ATOM 13 C1' U B 941 53.164 69.884 106.696 1.00 42.76 C
ATOM 14 N1 U B 941 52.595 68.553 106.969 1.00 42.43 N
ATOM 15 C2 U B 941 51.351 68.501 107.562 1.00 41.23 C
ATOM 16 O2 U B 941 50.696 69.493 107.817 1.00 42.51 O
ATOM 17 N3 U B 941 50.897 67.248 107.844 1.00 40.60 N
ATOM 18 C4 U B 941 51.527 66.066 107.592 1.00 42.43 C
ATOM 19 O4 U B 941 51.010 65.022 107.973 1.00 44.24 O
ATOM 20 C5 U B 941 52.792 66.191 106.949 1.00 42.95 C
ATOM 21 C6 U B 941 53.272 67.401 106.667 1.00 42.50 C
ATOM 22 P A B 942 56.041 70.832 110.394 1.00 37.86 P
ATOM 23 OP1 A B 942 56.938 71.912 110.879 1.00 39.27 O
ATOM 24 OP2 A B 942 56.436 69.424 110.581 1.00 40.66 O
ATOM 25 O5' A B 942 54.605 71.028 111.046 1.00 39.60 O
TER
ATOM 2 P G A 940 56.043 63.664 100.261 1.00 50.19 P
ATOM 3 OP1 G A 940 56.678 64.023 98.963 1.00 50.18 O
ATOM 4 OP2 G A 940 56.373 62.371 100.915 1.00 48.36 O
ATOM 5 O5' G A 940 56.292 64.859 101.275 1.00 50.84 O
ATOM 6 C5' G A 940 57.167 64.708 102.386 1.00 53.29 C
ATOM 7 C4' G A 940 56.474 65.152 103.644 1.00 53.52 C
ATOM 8 O4' G A 940 55.218 64.437 103.771 1.00 54.16 O
ATOM 9 C3' G A 940 57.250 64.880 104.922 1.00 53.61 C
ATOM 10 O3' G A 940 56.911 65.875 105.871 1.00 52.70 O
ATOM 11 C2' G A 940 56.688 63.536 105.359 1.00 54.47 C
ATOM 12 O2' G A 940 56.822 63.327 106.745 1.00 57.48 O
ATOM 13 C1' G A 940 55.220 63.689 104.969 1.00 55.71 C
ATOM 14 N9 G A 940 54.546 62.421 104.715 1.00 57.33 N
ATOM 15 C8 G A 940 54.921 61.461 103.809 1.00 58.74 C
ATOM 16 N7 G A 940 54.138 60.419 103.815 1.00 60.37 N
ATOM 17 C5 G A 940 53.185 60.707 104.784 1.00 60.32 C
ATOM 18 C6 G A 940 52.076 59.939 105.246 1.00 60.83 C
ATOM 19 O6 G A 940 51.718 58.803 104.895 1.00 61.96 O
ATOM 20 N1 G A 940 51.361 60.617 106.225 1.00 60.30 N
ATOM 21 C2 G A 940 51.673 61.857 106.710 1.00 58.84 C
ATOM 22 N2 G A 940 50.859 62.331 107.654 1.00 58.58 N
ATOM 23 N3 G A 940 52.706 62.577 106.301 1.00 58.61 N
ATOM 24 C4 G A 940 53.414 61.944 105.341 1.00 58.66 C
ATOM 25 P U A 941 57.718 67.261 105.893 1.00 53.09 P
ATOM 26 OP1 U A 941 57.946 67.682 104.486 1.00 50.92 O
ATOM 27 OP2 U A 941 58.871 67.142 106.820 1.00 52.61 O
ATOM 28 O5' U A 941 56.686 68.273 106.547 1.00 49.34 O
TER
ATOM 1 O3' G B 940 56.911 65.875 105.871 1.00 52.70 O
ATOM 2 P U B 941 57.718 67.261 105.893 1.00 53.09 P
ATOM 3 OP1 U B 941 57.946 67.682 104.486 1.00 50.92 O
ATOM 4 OP2 U B 941 58.871 67.142 106.820 1.00 52.61 O
ATOM 5 O5' U B 941 56.686 68.273 106.547 1.00 49.34 O
ATOM 6 C5' U B 941 56.739 69.653 106.216 1.00 46.16 C
ATOM 7 C4' U B 941 55.458 70.329 106.609 1.00 44.01 C
ATOM 8 O4' U B 941 54.334 69.732 105.909 1.00 44.24 O
ATOM 9 C3' U B 941 55.057 70.216 108.061 1.00 39.87 C
ATOM 10 O3' U B 941 55.800 71.122 108.836 1.00 37.86 O
ATOM 11 C2' U B 941 53.591 70.607 107.980 1.00 41.90 C
ATOM 12 O2' U B 941 53.411 71.999 107.799 1.00 40.55 O
ATOM 13 C1' U B 941 53.164 69.884 106.696 1.00 42.76 C
ATOM 14 N1 U B 941 52.595 68.553 106.969 1.00 42.43 N
ATOM 15 C2 U B 941 51.351 68.501 107.562 1.00 41.23 C
ATOM 16 O2 U B 941 50.696 69.493 107.817 1.00 42.51 O
ATOM 17 N3 U B 941 50.897 67.248 107.844 1.00 40.60 N
ATOM 18 C4 U B 941 51.527 66.066 107.592 1.00 42.43 C
ATOM 19 O4 U B 941 51.010 65.022 107.973 1.00 44.24 O
ATOM 20 C5 U B 941 52.792 66.191 106.949 1.00 42.95 C
ATOM 21 C6 U B 941 53.272 67.401 106.667 1.00 42.50 C
ATOM 22 P A B 942 56.041 70.832 110.394 1.00 37.86 P
ATOM 23 OP1 A B 942 56.938 71.912 110.879 1.00 39.27 O
ATOM 24 OP2 A B 942 56.436 69.424 110.581 1.00 40.66 O
ATOM 25 O5' A B 942 54.605 71.028 111.046 1.00 39.60 O
TER
Atoms:
OP1: (56.678,64.023,98.963)
OP2: (56.373,62.371,100.915)
C3': (57.250,64.880,104.922)
C1': (55.220,63.689,104.969)
C5': (57.167,64.708,102.386)
O6: (51.718,58.803,104.895)
O4': (55.218,64.437,103.771)
C8: (54.921,61.461,103.809)
C2: (51.673,61.857,106.710)
C6: (52.076,59.939,105.246)
C5: (53.185,60.707,104.784)
C4: (53.414,61.944,105.341)
P: (56.043,63.664,100.261)
C4': (56.474,65.152,103.644)
C2': (56.688,63.536,105.359)
O2': (56.822,63.327,106.745)
N1: (51.361,60.617,106.225)
N2: (50.859,62.331,107.654)
N3: (52.706,62.577,106.301)
N7: (54.138,60.419,103.815)
N9: (54.546,62.421,104.715)
O5': (56.292,64.859,101.275)
O3': (56.911,65.875,105.871)
OP2: (56.373,62.371,100.915)
C3': (57.250,64.880,104.922)
C1': (55.220,63.689,104.969)
C5': (57.167,64.708,102.386)
O6: (51.718,58.803,104.895)
O4': (55.218,64.437,103.771)
C8: (54.921,61.461,103.809)
C2: (51.673,61.857,106.710)
C6: (52.076,59.939,105.246)
C5: (53.185,60.707,104.784)
C4: (53.414,61.944,105.341)
P: (56.043,63.664,100.261)
C4': (56.474,65.152,103.644)
C2': (56.688,63.536,105.359)
O2': (56.822,63.327,106.745)
N1: (51.361,60.617,106.225)
N2: (50.859,62.331,107.654)
N3: (52.706,62.577,106.301)
N7: (54.138,60.419,103.815)
N9: (54.546,62.421,104.715)
O5': (56.292,64.859,101.275)
O3': (56.911,65.875,105.871)
C4: (51.527,66.066,107.592)
N3: (50.897,67.248,107.844)
OP1: (57.946,67.682,104.486)
OP2: (58.871,67.142,106.820)
C2: (51.351,68.501,107.562)
C1': (53.164,69.884,106.696)
C3': (55.057,70.216,108.061)
O5': (56.686,68.273,106.547)
O4': (54.334,69.732,105.909)
C5': (56.739,69.653,106.216)
P: (57.718,67.261,105.893)
C4': (55.458,70.329,106.609)
C2': (53.591,70.607,107.980)
O2': (53.411,71.999,107.799)
N1: (52.595,68.553,106.969)
O4: (51.010,65.022,107.973)
O2: (50.696,69.493,107.817)
C6: (53.272,67.401,106.667)
C5: (52.792,66.191,106.949)
O3': (55.800,71.122,108.836)
N3: (50.897,67.248,107.844)
OP1: (57.946,67.682,104.486)
OP2: (58.871,67.142,106.820)
C2: (51.351,68.501,107.562)
C1': (53.164,69.884,106.696)
C3': (55.057,70.216,108.061)
O5': (56.686,68.273,106.547)
O4': (54.334,69.732,105.909)
C5': (56.739,69.653,106.216)
P: (57.718,67.261,105.893)
C4': (55.458,70.329,106.609)
C2': (53.591,70.607,107.980)
O2': (53.411,71.999,107.799)
N1: (52.595,68.553,106.969)
O4: (51.010,65.022,107.973)
O2: (50.696,69.493,107.817)
C6: (53.272,67.401,106.667)
C5: (52.792,66.191,106.949)
O3': (55.800,71.122,108.836)
Image (generated by PyMOL):