Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0576:0577
Extra
PDB:
ATOM 1 O3' A A 575 -8.956 86.264 110.305 1.00 63.45 O
ATOM 2 P G A 576 -9.231 84.862 109.574 1.00 65.98 P
ATOM 3 OP1 G A 576 -10.696 84.625 109.617 1.00 68.24 O
ATOM 4 OP2 G A 576 -8.305 83.845 110.135 1.00 64.96 O
ATOM 5 O5' G A 576 -8.845 85.134 108.048 1.00 65.22 O
ATOM 6 C5' G A 576 -7.507 85.519 107.677 1.00 60.86 C
ATOM 7 C4' G A 576 -7.371 87.029 107.683 1.00 58.20 C
ATOM 8 O4' G A 576 -6.111 87.379 108.305 1.00 57.01 O
ATOM 9 C3' G A 576 -7.384 87.758 106.340 1.00 56.55 C
ATOM 10 O3' G A 576 -7.887 89.083 106.586 1.00 56.25 O
ATOM 11 C2' G A 576 -5.895 87.777 105.995 1.00 54.99 C
ATOM 12 O2' G A 576 -5.510 88.758 105.051 1.00 52.81 O
ATOM 13 C1' G A 576 -5.292 88.053 107.373 1.00 53.71 C
ATOM 14 N9 G A 576 -3.927 87.596 107.598 1.00 49.76 N
ATOM 15 C8 G A 576 -3.305 86.485 107.078 1.00 48.39 C
ATOM 16 N7 G A 576 -2.093 86.323 107.529 1.00 47.09 N
ATOM 17 C5 G A 576 -1.901 87.403 108.382 1.00 46.18 C
ATOM 18 C6 G A 576 -0.784 87.765 109.158 1.00 45.09 C
ATOM 19 O6 G A 576 0.303 87.189 109.249 1.00 46.45 O
ATOM 20 N1 G A 576 -1.019 88.929 109.883 1.00 43.42 N
ATOM 21 C2 G A 576 -2.185 89.653 109.860 1.00 43.13 C
ATOM 22 N2 G A 576 -2.231 90.746 110.640 1.00 41.46 N
ATOM 23 N3 G A 576 -3.232 89.328 109.131 1.00 44.23 N
ATOM 24 C4 G A 576 -3.022 88.199 108.424 1.00 46.33 C
ATOM 25 P U A 577 -8.172 90.097 105.364 1.00 56.89 P
ATOM 26 OP1 U A 577 -8.721 89.344 104.210 1.00 55.73 O
ATOM 27 OP2 U A 577 -6.972 90.950 105.174 1.00 58.89 O
ATOM 28 O5' U A 577 -9.309 91.052 105.938 1.00 57.70 O
TER
ATOM 1 O3' G B 576 -7.887 89.083 106.586 1.00 56.25 O
ATOM 2 P U B 577 -8.172 90.097 105.364 1.00 56.89 P
ATOM 3 OP1 U B 577 -8.721 89.344 104.210 1.00 55.73 O
ATOM 4 OP2 U B 577 -6.972 90.950 105.174 1.00 58.89 O
ATOM 5 O5' U B 577 -9.309 91.052 105.938 1.00 57.70 O
ATOM 6 C5' U B 577 -10.611 90.536 106.303 1.00 57.87 C
ATOM 7 C4' U B 577 -11.124 91.240 107.541 1.00 57.09 C
ATOM 8 O4' U B 577 -10.428 90.754 108.718 1.00 57.17 O
ATOM 9 C3' U B 577 -10.891 92.739 107.566 1.00 57.09 C
ATOM 10 O3' U B 577 -11.868 93.441 106.804 1.00 58.70 O
ATOM 11 C2' U B 577 -10.936 93.062 109.055 1.00 57.30 C
ATOM 12 O2' U B 577 -12.245 93.202 109.560 1.00 58.82 O
ATOM 13 C1' U B 577 -10.292 91.810 109.661 1.00 57.47 C
ATOM 14 N1 U B 577 -8.872 91.941 110.041 1.00 56.80 N
ATOM 15 C2 U B 577 -8.532 92.909 110.981 1.00 56.72 C
ATOM 16 O2 U B 577 -9.345 93.662 111.491 1.00 55.98 O
ATOM 17 N3 U B 577 -7.197 92.963 111.301 1.00 57.52 N
ATOM 18 C4 U B 577 -6.184 92.175 110.794 1.00 58.18 C
ATOM 19 O4 U B 577 -5.025 92.368 111.166 1.00 59.05 O
ATOM 20 C5 U B 577 -6.606 91.205 109.830 1.00 57.36 C
ATOM 21 C6 U B 577 -7.900 91.124 109.493 1.00 57.74 C
ATOM 22 P A B 578 -11.447 94.772 106.008 1.00 59.68 P
ATOM 23 OP1 A B 578 -12.606 95.233 105.208 1.00 61.11 O
ATOM 24 OP2 A B 578 -10.151 94.511 105.331 1.00 60.72 O
ATOM 25 O5' A B 578 -11.190 95.835 107.163 1.00 57.01 O
TER
ATOM 2 P G A 576 -9.231 84.862 109.574 1.00 65.98 P
ATOM 3 OP1 G A 576 -10.696 84.625 109.617 1.00 68.24 O
ATOM 4 OP2 G A 576 -8.305 83.845 110.135 1.00 64.96 O
ATOM 5 O5' G A 576 -8.845 85.134 108.048 1.00 65.22 O
ATOM 6 C5' G A 576 -7.507 85.519 107.677 1.00 60.86 C
ATOM 7 C4' G A 576 -7.371 87.029 107.683 1.00 58.20 C
ATOM 8 O4' G A 576 -6.111 87.379 108.305 1.00 57.01 O
ATOM 9 C3' G A 576 -7.384 87.758 106.340 1.00 56.55 C
ATOM 10 O3' G A 576 -7.887 89.083 106.586 1.00 56.25 O
ATOM 11 C2' G A 576 -5.895 87.777 105.995 1.00 54.99 C
ATOM 12 O2' G A 576 -5.510 88.758 105.051 1.00 52.81 O
ATOM 13 C1' G A 576 -5.292 88.053 107.373 1.00 53.71 C
ATOM 14 N9 G A 576 -3.927 87.596 107.598 1.00 49.76 N
ATOM 15 C8 G A 576 -3.305 86.485 107.078 1.00 48.39 C
ATOM 16 N7 G A 576 -2.093 86.323 107.529 1.00 47.09 N
ATOM 17 C5 G A 576 -1.901 87.403 108.382 1.00 46.18 C
ATOM 18 C6 G A 576 -0.784 87.765 109.158 1.00 45.09 C
ATOM 19 O6 G A 576 0.303 87.189 109.249 1.00 46.45 O
ATOM 20 N1 G A 576 -1.019 88.929 109.883 1.00 43.42 N
ATOM 21 C2 G A 576 -2.185 89.653 109.860 1.00 43.13 C
ATOM 22 N2 G A 576 -2.231 90.746 110.640 1.00 41.46 N
ATOM 23 N3 G A 576 -3.232 89.328 109.131 1.00 44.23 N
ATOM 24 C4 G A 576 -3.022 88.199 108.424 1.00 46.33 C
ATOM 25 P U A 577 -8.172 90.097 105.364 1.00 56.89 P
ATOM 26 OP1 U A 577 -8.721 89.344 104.210 1.00 55.73 O
ATOM 27 OP2 U A 577 -6.972 90.950 105.174 1.00 58.89 O
ATOM 28 O5' U A 577 -9.309 91.052 105.938 1.00 57.70 O
TER
ATOM 1 O3' G B 576 -7.887 89.083 106.586 1.00 56.25 O
ATOM 2 P U B 577 -8.172 90.097 105.364 1.00 56.89 P
ATOM 3 OP1 U B 577 -8.721 89.344 104.210 1.00 55.73 O
ATOM 4 OP2 U B 577 -6.972 90.950 105.174 1.00 58.89 O
ATOM 5 O5' U B 577 -9.309 91.052 105.938 1.00 57.70 O
ATOM 6 C5' U B 577 -10.611 90.536 106.303 1.00 57.87 C
ATOM 7 C4' U B 577 -11.124 91.240 107.541 1.00 57.09 C
ATOM 8 O4' U B 577 -10.428 90.754 108.718 1.00 57.17 O
ATOM 9 C3' U B 577 -10.891 92.739 107.566 1.00 57.09 C
ATOM 10 O3' U B 577 -11.868 93.441 106.804 1.00 58.70 O
ATOM 11 C2' U B 577 -10.936 93.062 109.055 1.00 57.30 C
ATOM 12 O2' U B 577 -12.245 93.202 109.560 1.00 58.82 O
ATOM 13 C1' U B 577 -10.292 91.810 109.661 1.00 57.47 C
ATOM 14 N1 U B 577 -8.872 91.941 110.041 1.00 56.80 N
ATOM 15 C2 U B 577 -8.532 92.909 110.981 1.00 56.72 C
ATOM 16 O2 U B 577 -9.345 93.662 111.491 1.00 55.98 O
ATOM 17 N3 U B 577 -7.197 92.963 111.301 1.00 57.52 N
ATOM 18 C4 U B 577 -6.184 92.175 110.794 1.00 58.18 C
ATOM 19 O4 U B 577 -5.025 92.368 111.166 1.00 59.05 O
ATOM 20 C5 U B 577 -6.606 91.205 109.830 1.00 57.36 C
ATOM 21 C6 U B 577 -7.900 91.124 109.493 1.00 57.74 C
ATOM 22 P A B 578 -11.447 94.772 106.008 1.00 59.68 P
ATOM 23 OP1 A B 578 -12.606 95.233 105.208 1.00 61.11 O
ATOM 24 OP2 A B 578 -10.151 94.511 105.331 1.00 60.72 O
ATOM 25 O5' A B 578 -11.190 95.835 107.163 1.00 57.01 O
TER
Atoms:
OP1: (-10.696,84.625,109.617)
OP2: (-8.305,83.845,110.135)
C3': (-7.384,87.758,106.340)
C1': (-5.292,88.053,107.373)
C5': (-7.507,85.519,107.677)
O6: (0.303,87.189,109.249)
O4': (-6.111,87.379,108.305)
C8: (-3.305,86.485,107.078)
C2: (-2.185,89.653,109.860)
C6: (-0.784,87.765,109.158)
C5: (-1.901,87.403,108.382)
C4: (-3.022,88.199,108.424)
P: (-9.231,84.862,109.574)
C4': (-7.371,87.029,107.683)
C2': (-5.895,87.777,105.995)
O2': (-5.510,88.758,105.051)
N1: (-1.019,88.929,109.883)
N2: (-2.231,90.746,110.640)
N3: (-3.232,89.328,109.131)
N7: (-2.093,86.323,107.529)
N9: (-3.927,87.596,107.598)
O5': (-8.845,85.134,108.048)
O3': (-7.887,89.083,106.586)
OP2: (-8.305,83.845,110.135)
C3': (-7.384,87.758,106.340)
C1': (-5.292,88.053,107.373)
C5': (-7.507,85.519,107.677)
O6: (0.303,87.189,109.249)
O4': (-6.111,87.379,108.305)
C8: (-3.305,86.485,107.078)
C2: (-2.185,89.653,109.860)
C6: (-0.784,87.765,109.158)
C5: (-1.901,87.403,108.382)
C4: (-3.022,88.199,108.424)
P: (-9.231,84.862,109.574)
C4': (-7.371,87.029,107.683)
C2': (-5.895,87.777,105.995)
O2': (-5.510,88.758,105.051)
N1: (-1.019,88.929,109.883)
N2: (-2.231,90.746,110.640)
N3: (-3.232,89.328,109.131)
N7: (-2.093,86.323,107.529)
N9: (-3.927,87.596,107.598)
O5': (-8.845,85.134,108.048)
O3': (-7.887,89.083,106.586)
C4: (-6.184,92.175,110.794)
N3: (-7.197,92.963,111.301)
OP1: (-8.721,89.344,104.210)
OP2: (-6.972,90.950,105.174)
C2: (-8.532,92.909,110.981)
C1': (-10.292,91.810,109.661)
C3': (-10.891,92.739,107.566)
O5': (-9.309,91.052,105.938)
O4': (-10.428,90.754,108.718)
C5': (-10.611,90.536,106.303)
P: (-8.172,90.097,105.364)
C4': (-11.124,91.240,107.541)
C2': (-10.936,93.062,109.055)
O2': (-12.245,93.202,109.560)
N1: (-8.872,91.941,110.041)
O4: (-5.025,92.368,111.166)
O2: (-9.345,93.662,111.491)
C6: (-7.900,91.124,109.493)
C5: (-6.606,91.205,109.830)
O3': (-11.868,93.441,106.804)
N3: (-7.197,92.963,111.301)
OP1: (-8.721,89.344,104.210)
OP2: (-6.972,90.950,105.174)
C2: (-8.532,92.909,110.981)
C1': (-10.292,91.810,109.661)
C3': (-10.891,92.739,107.566)
O5': (-9.309,91.052,105.938)
O4': (-10.428,90.754,108.718)
C5': (-10.611,90.536,106.303)
P: (-8.172,90.097,105.364)
C4': (-11.124,91.240,107.541)
C2': (-10.936,93.062,109.055)
O2': (-12.245,93.202,109.560)
N1: (-8.872,91.941,110.041)
O4: (-5.025,92.368,111.166)
O2: (-9.345,93.662,111.491)
C6: (-7.900,91.124,109.493)
C5: (-6.606,91.205,109.830)
O3': (-11.868,93.441,106.804)
Image (generated by PyMOL):