Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02366:02368
Extra
PDB:
ATOM 1 O3' G A2365 57.470 110.979 124.027 1.00 42.47 O
ATOM 2 P G A2366 56.775 111.207 122.605 1.00 43.53 P
ATOM 3 OP1 G A2366 56.006 112.479 122.662 1.00 42.38 O
ATOM 4 OP2 G A2366 56.095 109.946 122.216 1.00 41.82 O
ATOM 5 O5' G A2366 58.005 111.411 121.625 1.00 43.71 O
ATOM 6 C5' G A2366 58.995 112.403 121.899 1.00 43.26 C
ATOM 7 C4' G A2366 60.165 112.207 120.987 1.00 43.94 C
ATOM 8 O4' G A2366 60.690 110.874 121.221 1.00 44.65 O
ATOM 9 C3' G A2366 59.853 112.295 119.498 1.00 45.37 C
ATOM 10 O3' G A2366 60.963 112.883 118.830 1.00 49.64 O
ATOM 11 C2' G A2366 59.662 110.829 119.106 1.00 44.19 C
ATOM 12 O2' G A2366 59.964 110.550 117.752 1.00 43.80 O
ATOM 13 C1' G A2366 60.655 110.122 120.027 1.00 43.97 C
ATOM 14 N9 G A2366 60.248 108.760 120.365 1.00 43.73 N
ATOM 15 C8 G A2366 58.991 108.350 120.729 1.00 44.45 C
ATOM 16 N7 G A2366 58.910 107.066 120.935 1.00 45.03 N
ATOM 17 C5 G A2366 60.192 106.597 120.706 1.00 45.13 C
ATOM 18 C6 G A2366 60.710 105.277 120.773 1.00 46.63 C
ATOM 19 O6 G A2366 60.111 104.224 121.064 1.00 45.60 O
ATOM 20 N1 G A2366 62.070 105.247 120.462 1.00 46.65 N
ATOM 21 C2 G A2366 62.830 106.344 120.139 1.00 44.70 C
ATOM 22 N2 G A2366 64.119 106.112 119.878 1.00 42.37 N
ATOM 23 N3 G A2366 62.356 107.579 120.077 1.00 45.59 N
ATOM 24 C4 G A2366 61.037 107.631 120.366 1.00 44.65 C
ATOM 25 P C A2367 61.068 114.484 118.715 1.00 50.23 P
ATOM 26 OP1 C A2367 60.327 115.093 119.843 1.00 49.61 O
ATOM 27 OP2 C A2367 60.715 114.858 117.330 1.00 51.63 O
ATOM 28 O5' C A2367 62.624 114.764 118.906 1.00 54.72 O
TER
ATOM 1 O3' C B2367 66.009 114.848 118.177 1.00 69.85 O
ATOM 2 P U B2368 66.559 113.956 116.957 1.00 70.78 P
ATOM 3 OP1 U B2368 66.994 114.903 115.896 1.00 70.96 O
ATOM 4 OP2 U B2368 65.528 112.928 116.638 1.00 71.10 O
ATOM 5 O5' U B2368 67.864 113.244 117.544 1.00 68.01 O
ATOM 6 C5' U B2368 69.055 114.003 117.850 1.00 63.69 C
ATOM 7 C4' U B2368 70.260 113.089 117.990 1.00 61.55 C
ATOM 8 O4' U B2368 70.084 112.196 119.119 1.00 60.05 O
ATOM 9 C3' U B2368 70.550 112.162 116.823 1.00 60.30 C
ATOM 10 O3' U B2368 71.275 112.823 115.797 1.00 60.65 O
ATOM 11 C2' U B2368 71.377 111.066 117.474 1.00 59.75 C
ATOM 12 O2' U B2368 72.719 111.435 117.666 1.00 59.39 O
ATOM 13 C1' U B2368 70.699 110.947 118.839 1.00 60.55 C
ATOM 14 N1 U B2368 69.669 109.896 118.871 1.00 62.06 N
ATOM 15 C2 U B2368 70.088 108.573 118.919 1.00 61.91 C
ATOM 16 O2 U B2368 71.262 108.245 118.947 1.00 61.48 O
ATOM 17 N3 U B2368 69.074 107.649 118.932 1.00 62.18 N
ATOM 18 C4 U B2368 67.716 107.901 118.913 1.00 62.47 C
ATOM 19 O4 U B2368 66.924 106.961 118.969 1.00 63.27 O
ATOM 20 C5 U B2368 67.367 109.283 118.866 1.00 62.10 C
ATOM 21 C6 U B2368 68.326 110.209 118.847 1.00 62.33 C
ATOM 22 P U B2369 71.013 112.430 114.260 1.00 62.54 P
ATOM 23 OP1 U B2369 71.904 113.266 113.407 1.00 62.83 O
ATOM 24 OP2 U B2369 69.547 112.454 114.022 1.00 63.07 O
ATOM 25 O5' U B2369 71.499 110.913 114.171 1.00 59.19 O
TER
ATOM 2 P G A2366 56.775 111.207 122.605 1.00 43.53 P
ATOM 3 OP1 G A2366 56.006 112.479 122.662 1.00 42.38 O
ATOM 4 OP2 G A2366 56.095 109.946 122.216 1.00 41.82 O
ATOM 5 O5' G A2366 58.005 111.411 121.625 1.00 43.71 O
ATOM 6 C5' G A2366 58.995 112.403 121.899 1.00 43.26 C
ATOM 7 C4' G A2366 60.165 112.207 120.987 1.00 43.94 C
ATOM 8 O4' G A2366 60.690 110.874 121.221 1.00 44.65 O
ATOM 9 C3' G A2366 59.853 112.295 119.498 1.00 45.37 C
ATOM 10 O3' G A2366 60.963 112.883 118.830 1.00 49.64 O
ATOM 11 C2' G A2366 59.662 110.829 119.106 1.00 44.19 C
ATOM 12 O2' G A2366 59.964 110.550 117.752 1.00 43.80 O
ATOM 13 C1' G A2366 60.655 110.122 120.027 1.00 43.97 C
ATOM 14 N9 G A2366 60.248 108.760 120.365 1.00 43.73 N
ATOM 15 C8 G A2366 58.991 108.350 120.729 1.00 44.45 C
ATOM 16 N7 G A2366 58.910 107.066 120.935 1.00 45.03 N
ATOM 17 C5 G A2366 60.192 106.597 120.706 1.00 45.13 C
ATOM 18 C6 G A2366 60.710 105.277 120.773 1.00 46.63 C
ATOM 19 O6 G A2366 60.111 104.224 121.064 1.00 45.60 O
ATOM 20 N1 G A2366 62.070 105.247 120.462 1.00 46.65 N
ATOM 21 C2 G A2366 62.830 106.344 120.139 1.00 44.70 C
ATOM 22 N2 G A2366 64.119 106.112 119.878 1.00 42.37 N
ATOM 23 N3 G A2366 62.356 107.579 120.077 1.00 45.59 N
ATOM 24 C4 G A2366 61.037 107.631 120.366 1.00 44.65 C
ATOM 25 P C A2367 61.068 114.484 118.715 1.00 50.23 P
ATOM 26 OP1 C A2367 60.327 115.093 119.843 1.00 49.61 O
ATOM 27 OP2 C A2367 60.715 114.858 117.330 1.00 51.63 O
ATOM 28 O5' C A2367 62.624 114.764 118.906 1.00 54.72 O
TER
ATOM 1 O3' C B2367 66.009 114.848 118.177 1.00 69.85 O
ATOM 2 P U B2368 66.559 113.956 116.957 1.00 70.78 P
ATOM 3 OP1 U B2368 66.994 114.903 115.896 1.00 70.96 O
ATOM 4 OP2 U B2368 65.528 112.928 116.638 1.00 71.10 O
ATOM 5 O5' U B2368 67.864 113.244 117.544 1.00 68.01 O
ATOM 6 C5' U B2368 69.055 114.003 117.850 1.00 63.69 C
ATOM 7 C4' U B2368 70.260 113.089 117.990 1.00 61.55 C
ATOM 8 O4' U B2368 70.084 112.196 119.119 1.00 60.05 O
ATOM 9 C3' U B2368 70.550 112.162 116.823 1.00 60.30 C
ATOM 10 O3' U B2368 71.275 112.823 115.797 1.00 60.65 O
ATOM 11 C2' U B2368 71.377 111.066 117.474 1.00 59.75 C
ATOM 12 O2' U B2368 72.719 111.435 117.666 1.00 59.39 O
ATOM 13 C1' U B2368 70.699 110.947 118.839 1.00 60.55 C
ATOM 14 N1 U B2368 69.669 109.896 118.871 1.00 62.06 N
ATOM 15 C2 U B2368 70.088 108.573 118.919 1.00 61.91 C
ATOM 16 O2 U B2368 71.262 108.245 118.947 1.00 61.48 O
ATOM 17 N3 U B2368 69.074 107.649 118.932 1.00 62.18 N
ATOM 18 C4 U B2368 67.716 107.901 118.913 1.00 62.47 C
ATOM 19 O4 U B2368 66.924 106.961 118.969 1.00 63.27 O
ATOM 20 C5 U B2368 67.367 109.283 118.866 1.00 62.10 C
ATOM 21 C6 U B2368 68.326 110.209 118.847 1.00 62.33 C
ATOM 22 P U B2369 71.013 112.430 114.260 1.00 62.54 P
ATOM 23 OP1 U B2369 71.904 113.266 113.407 1.00 62.83 O
ATOM 24 OP2 U B2369 69.547 112.454 114.022 1.00 63.07 O
ATOM 25 O5' U B2369 71.499 110.913 114.171 1.00 59.19 O
TER
Atoms:
OP1: (56.006,112.479,122.662)
OP2: (56.095,109.946,122.216)
C3': (59.853,112.295,119.498)
C1': (60.655,110.122,120.027)
C5': (58.995,112.403,121.899)
O6: (60.111,104.224,121.064)
O4': (60.690,110.874,121.221)
C8: (58.991,108.350,120.729)
C2: (62.830,106.344,120.139)
C6: (60.710,105.277,120.773)
C5: (60.192,106.597,120.706)
C4: (61.037,107.631,120.366)
P: (56.775,111.207,122.605)
C4': (60.165,112.207,120.987)
C2': (59.662,110.829,119.106)
O2': (59.964,110.550,117.752)
N1: (62.070,105.247,120.462)
N2: (64.119,106.112,119.878)
N3: (62.356,107.579,120.077)
N7: (58.910,107.066,120.935)
N9: (60.248,108.760,120.365)
O5': (58.005,111.411,121.625)
O3': (60.963,112.883,118.830)
OP2: (56.095,109.946,122.216)
C3': (59.853,112.295,119.498)
C1': (60.655,110.122,120.027)
C5': (58.995,112.403,121.899)
O6: (60.111,104.224,121.064)
O4': (60.690,110.874,121.221)
C8: (58.991,108.350,120.729)
C2: (62.830,106.344,120.139)
C6: (60.710,105.277,120.773)
C5: (60.192,106.597,120.706)
C4: (61.037,107.631,120.366)
P: (56.775,111.207,122.605)
C4': (60.165,112.207,120.987)
C2': (59.662,110.829,119.106)
O2': (59.964,110.550,117.752)
N1: (62.070,105.247,120.462)
N2: (64.119,106.112,119.878)
N3: (62.356,107.579,120.077)
N7: (58.910,107.066,120.935)
N9: (60.248,108.760,120.365)
O5': (58.005,111.411,121.625)
O3': (60.963,112.883,118.830)
C4: (67.716,107.901,118.913)
N3: (69.074,107.649,118.932)
OP1: (66.994,114.903,115.896)
OP2: (65.528,112.928,116.638)
C2: (70.088,108.573,118.919)
C1': (70.699,110.947,118.839)
C3': (70.550,112.162,116.823)
O5': (67.864,113.244,117.544)
O4': (70.084,112.196,119.119)
C5': (69.055,114.003,117.850)
P: (66.559,113.956,116.957)
C4': (70.260,113.089,117.990)
C2': (71.377,111.066,117.474)
O2': (72.719,111.435,117.666)
N1: (69.669,109.896,118.871)
O4: (66.924,106.961,118.969)
O2: (71.262,108.245,118.947)
C6: (68.326,110.209,118.847)
C5: (67.367,109.283,118.866)
O3': (71.275,112.823,115.797)
N3: (69.074,107.649,118.932)
OP1: (66.994,114.903,115.896)
OP2: (65.528,112.928,116.638)
C2: (70.088,108.573,118.919)
C1': (70.699,110.947,118.839)
C3': (70.550,112.162,116.823)
O5': (67.864,113.244,117.544)
O4': (70.084,112.196,119.119)
C5': (69.055,114.003,117.850)
P: (66.559,113.956,116.957)
C4': (70.260,113.089,117.990)
C2': (71.377,111.066,117.474)
O2': (72.719,111.435,117.666)
N1: (69.669,109.896,118.871)
O4: (66.924,106.961,118.969)
O2: (71.262,108.245,118.947)
C6: (68.326,110.209,118.847)
C5: (67.367,109.283,118.866)
O3': (71.275,112.823,115.797)
Image (generated by PyMOL):