Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A496:A470
Extra
PDB:
ATOM 1 O3' A A 495 10.676 153.389 58.063 1.00 55.43 O
ATOM 2 P A A 496 11.609 154.476 58.781 1.00 56.84 P
ATOM 3 OP1 A A 496 10.752 155.221 59.737 1.00 55.77 O
ATOM 4 OP2 A A 496 12.415 155.232 57.768 1.00 56.85 O
ATOM 5 O5' A A 496 12.613 153.598 59.634 1.00 55.51 O
ATOM 6 C5' A A 496 12.150 152.673 60.610 1.00 55.32 C
ATOM 7 C4' A A 496 13.257 151.708 60.895 1.00 55.53 C
ATOM 8 O4' A A 496 13.647 151.071 59.649 1.00 54.83 O
ATOM 9 C3' A A 496 14.523 152.397 61.378 1.00 54.90 C
ATOM 10 O3' A A 496 14.492 152.460 62.790 1.00 54.44 O
ATOM 11 C2' A A 496 15.605 151.425 60.955 1.00 55.55 C
ATOM 12 O2' A A 496 15.660 150.377 61.901 1.00 56.71 O
ATOM 13 C1' A A 496 15.048 150.904 59.626 1.00 53.13 C
ATOM 14 N9 A A 496 15.563 151.583 58.442 1.00 50.79 N
ATOM 15 C8 A A 496 15.085 152.710 57.839 1.00 51.11 C
ATOM 16 N7 A A 496 15.731 153.042 56.749 1.00 50.09 N
ATOM 17 C5 A A 496 16.709 152.070 56.634 1.00 49.43 C
ATOM 18 C6 A A 496 17.717 151.847 55.680 1.00 48.41 C
ATOM 19 N6 A A 496 17.895 152.599 54.591 1.00 47.09 N
ATOM 20 N1 A A 496 18.543 150.804 55.881 1.00 48.23 N
ATOM 21 C2 A A 496 18.351 150.034 56.957 1.00 48.79 C
ATOM 22 N3 A A 496 17.433 150.130 57.907 1.00 49.78 N
ATOM 23 C4 A A 496 16.632 151.180 57.685 1.00 49.99 C
ATOM 24 P A A 497 14.635 153.859 63.519 1.00 53.45 P
ATOM 25 OP1 A A 497 13.892 153.786 64.787 1.00 56.10 O
ATOM 26 OP2 A A 497 14.310 154.893 62.529 1.00 55.07 O
ATOM 27 O5' A A 497 16.164 153.953 63.885 1.00 54.54 O
TER
ATOM 1 O3' U B 469 24.754 148.940 56.386 1.00 42.72 O
ATOM 2 P G B 470 24.054 148.014 55.301 1.00 44.33 P
ATOM 3 OP1 G B 470 23.182 147.070 56.027 1.00 42.87 O
ATOM 4 OP2 G B 470 25.105 147.496 54.374 1.00 42.76 O
ATOM 5 O5' G B 470 23.159 149.065 54.513 1.00 45.93 O
ATOM 6 C5' G B 470 22.035 149.673 55.150 1.00 47.90 C
ATOM 7 C4' G B 470 21.432 150.721 54.261 1.00 49.46 C
ATOM 8 O4' G B 470 22.372 151.806 54.098 1.00 49.92 O
ATOM 9 C3' G B 470 21.168 150.293 52.827 1.00 49.72 C
ATOM 10 O3' G B 470 20.019 149.485 52.676 1.00 48.77 O
ATOM 11 C2' G B 470 21.038 151.633 52.133 1.00 50.42 C
ATOM 12 O2' G B 470 19.805 152.296 52.345 1.00 52.80 O
ATOM 13 C1' G B 470 22.143 152.411 52.840 1.00 52.06 C
ATOM 14 N9 G B 470 23.349 152.345 52.029 1.00 54.30 N
ATOM 15 C8 G B 470 24.327 151.379 51.980 1.00 53.17 C
ATOM 16 N7 G B 470 25.241 151.629 51.083 1.00 53.88 N
ATOM 17 C5 G B 470 24.848 152.837 50.526 1.00 55.75 C
ATOM 18 C6 G B 470 25.437 153.621 49.512 1.00 56.71 C
ATOM 19 O6 G B 470 26.460 153.394 48.860 1.00 57.37 O
ATOM 20 N1 G B 470 24.703 154.785 49.276 1.00 58.12 N
ATOM 21 C2 G B 470 23.544 155.138 49.926 1.00 58.81 C
ATOM 22 N2 G B 470 22.988 156.300 49.599 1.00 58.87 N
ATOM 23 N3 G B 470 22.978 154.405 50.846 1.00 58.69 N
ATOM 24 C4 G B 470 23.684 153.283 51.104 1.00 56.47 C
ATOM 25 P C B 471 20.037 148.275 51.613 1.00 50.51 P
ATOM 26 OP1 C B 471 18.952 147.394 52.121 1.00 50.12 O
ATOM 27 OP2 C B 471 21.420 147.724 51.465 1.00 48.35 O
ATOM 28 O5' C B 471 19.605 148.994 50.251 1.00 51.32 O
TER
ATOM 2 P A A 496 11.609 154.476 58.781 1.00 56.84 P
ATOM 3 OP1 A A 496 10.752 155.221 59.737 1.00 55.77 O
ATOM 4 OP2 A A 496 12.415 155.232 57.768 1.00 56.85 O
ATOM 5 O5' A A 496 12.613 153.598 59.634 1.00 55.51 O
ATOM 6 C5' A A 496 12.150 152.673 60.610 1.00 55.32 C
ATOM 7 C4' A A 496 13.257 151.708 60.895 1.00 55.53 C
ATOM 8 O4' A A 496 13.647 151.071 59.649 1.00 54.83 O
ATOM 9 C3' A A 496 14.523 152.397 61.378 1.00 54.90 C
ATOM 10 O3' A A 496 14.492 152.460 62.790 1.00 54.44 O
ATOM 11 C2' A A 496 15.605 151.425 60.955 1.00 55.55 C
ATOM 12 O2' A A 496 15.660 150.377 61.901 1.00 56.71 O
ATOM 13 C1' A A 496 15.048 150.904 59.626 1.00 53.13 C
ATOM 14 N9 A A 496 15.563 151.583 58.442 1.00 50.79 N
ATOM 15 C8 A A 496 15.085 152.710 57.839 1.00 51.11 C
ATOM 16 N7 A A 496 15.731 153.042 56.749 1.00 50.09 N
ATOM 17 C5 A A 496 16.709 152.070 56.634 1.00 49.43 C
ATOM 18 C6 A A 496 17.717 151.847 55.680 1.00 48.41 C
ATOM 19 N6 A A 496 17.895 152.599 54.591 1.00 47.09 N
ATOM 20 N1 A A 496 18.543 150.804 55.881 1.00 48.23 N
ATOM 21 C2 A A 496 18.351 150.034 56.957 1.00 48.79 C
ATOM 22 N3 A A 496 17.433 150.130 57.907 1.00 49.78 N
ATOM 23 C4 A A 496 16.632 151.180 57.685 1.00 49.99 C
ATOM 24 P A A 497 14.635 153.859 63.519 1.00 53.45 P
ATOM 25 OP1 A A 497 13.892 153.786 64.787 1.00 56.10 O
ATOM 26 OP2 A A 497 14.310 154.893 62.529 1.00 55.07 O
ATOM 27 O5' A A 497 16.164 153.953 63.885 1.00 54.54 O
TER
ATOM 1 O3' U B 469 24.754 148.940 56.386 1.00 42.72 O
ATOM 2 P G B 470 24.054 148.014 55.301 1.00 44.33 P
ATOM 3 OP1 G B 470 23.182 147.070 56.027 1.00 42.87 O
ATOM 4 OP2 G B 470 25.105 147.496 54.374 1.00 42.76 O
ATOM 5 O5' G B 470 23.159 149.065 54.513 1.00 45.93 O
ATOM 6 C5' G B 470 22.035 149.673 55.150 1.00 47.90 C
ATOM 7 C4' G B 470 21.432 150.721 54.261 1.00 49.46 C
ATOM 8 O4' G B 470 22.372 151.806 54.098 1.00 49.92 O
ATOM 9 C3' G B 470 21.168 150.293 52.827 1.00 49.72 C
ATOM 10 O3' G B 470 20.019 149.485 52.676 1.00 48.77 O
ATOM 11 C2' G B 470 21.038 151.633 52.133 1.00 50.42 C
ATOM 12 O2' G B 470 19.805 152.296 52.345 1.00 52.80 O
ATOM 13 C1' G B 470 22.143 152.411 52.840 1.00 52.06 C
ATOM 14 N9 G B 470 23.349 152.345 52.029 1.00 54.30 N
ATOM 15 C8 G B 470 24.327 151.379 51.980 1.00 53.17 C
ATOM 16 N7 G B 470 25.241 151.629 51.083 1.00 53.88 N
ATOM 17 C5 G B 470 24.848 152.837 50.526 1.00 55.75 C
ATOM 18 C6 G B 470 25.437 153.621 49.512 1.00 56.71 C
ATOM 19 O6 G B 470 26.460 153.394 48.860 1.00 57.37 O
ATOM 20 N1 G B 470 24.703 154.785 49.276 1.00 58.12 N
ATOM 21 C2 G B 470 23.544 155.138 49.926 1.00 58.81 C
ATOM 22 N2 G B 470 22.988 156.300 49.599 1.00 58.87 N
ATOM 23 N3 G B 470 22.978 154.405 50.846 1.00 58.69 N
ATOM 24 C4 G B 470 23.684 153.283 51.104 1.00 56.47 C
ATOM 25 P C B 471 20.037 148.275 51.613 1.00 50.51 P
ATOM 26 OP1 C B 471 18.952 147.394 52.121 1.00 50.12 O
ATOM 27 OP2 C B 471 21.420 147.724 51.465 1.00 48.35 O
ATOM 28 O5' C B 471 19.605 148.994 50.251 1.00 51.32 O
TER
Atoms:
OP1: (10.752,155.221,59.737)
OP2: (12.415,155.232,57.768)
C3': (14.523,152.397,61.378)
C1': (15.048,150.904,59.626)
C5': (12.150,152.673,60.610)
O4': (13.647,151.071,59.649)
C8: (15.085,152.710,57.839)
O2': (15.660,150.377,61.901)
C6: (17.717,151.847,55.680)
C5: (16.709,152.070,56.634)
C4: (16.632,151.180,57.685)
P: (11.609,154.476,58.781)
C4': (13.257,151.708,60.895)
C2': (15.605,151.425,60.955)
C2: (18.351,150.034,56.957)
N1: (18.543,150.804,55.881)
N3: (17.433,150.130,57.907)
N6: (17.895,152.599,54.591)
N7: (15.731,153.042,56.749)
N9: (15.563,151.583,58.442)
O5': (12.613,153.598,59.634)
O3': (14.492,152.460,62.790)
OP2: (12.415,155.232,57.768)
C3': (14.523,152.397,61.378)
C1': (15.048,150.904,59.626)
C5': (12.150,152.673,60.610)
O4': (13.647,151.071,59.649)
C8: (15.085,152.710,57.839)
O2': (15.660,150.377,61.901)
C6: (17.717,151.847,55.680)
C5: (16.709,152.070,56.634)
C4: (16.632,151.180,57.685)
P: (11.609,154.476,58.781)
C4': (13.257,151.708,60.895)
C2': (15.605,151.425,60.955)
C2: (18.351,150.034,56.957)
N1: (18.543,150.804,55.881)
N3: (17.433,150.130,57.907)
N6: (17.895,152.599,54.591)
N7: (15.731,153.042,56.749)
N9: (15.563,151.583,58.442)
O5': (12.613,153.598,59.634)
O3': (14.492,152.460,62.790)
OP1: (23.182,147.070,56.027)
OP2: (25.105,147.496,54.374)
C3': (21.168,150.293,52.827)
C1': (22.143,152.411,52.840)
C5': (22.035,149.673,55.150)
O6: (26.460,153.394,48.860)
O4': (22.372,151.806,54.098)
C8: (24.327,151.379,51.980)
C2: (23.544,155.138,49.926)
C6: (25.437,153.621,49.512)
C5: (24.848,152.837,50.526)
C4: (23.684,153.283,51.104)
P: (24.054,148.014,55.301)
C4': (21.432,150.721,54.261)
C2': (21.038,151.633,52.133)
O2': (19.805,152.296,52.345)
N1: (24.703,154.785,49.276)
N2: (22.988,156.300,49.599)
N3: (22.978,154.405,50.846)
N7: (25.241,151.629,51.083)
N9: (23.349,152.345,52.029)
O5': (23.159,149.065,54.513)
O3': (20.019,149.485,52.676)
OP2: (25.105,147.496,54.374)
C3': (21.168,150.293,52.827)
C1': (22.143,152.411,52.840)
C5': (22.035,149.673,55.150)
O6: (26.460,153.394,48.860)
O4': (22.372,151.806,54.098)
C8: (24.327,151.379,51.980)
C2: (23.544,155.138,49.926)
C6: (25.437,153.621,49.512)
C5: (24.848,152.837,50.526)
C4: (23.684,153.283,51.104)
P: (24.054,148.014,55.301)
C4': (21.432,150.721,54.261)
C2': (21.038,151.633,52.133)
O2': (19.805,152.296,52.345)
N1: (24.703,154.785,49.276)
N2: (22.988,156.300,49.599)
N3: (22.978,154.405,50.846)
N7: (25.241,151.629,51.083)
N9: (23.349,152.345,52.029)
O5': (23.159,149.065,54.513)
O3': (20.019,149.485,52.676)
Image (generated by PyMOL):