Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A110:A44
Extra
PDB:
ATOM 1 O3' G A 109 -38.020 -52.666 53.849 1.00 0.79 O
ATOM 2 P A A 110 -37.912 -51.106 54.187 1.00 28.27 P
ATOM 3 OP1 A A 110 -38.439 -50.393 53.005 1.00 38.06 O
ATOM 4 OP2 A A 110 -36.541 -50.798 54.682 1.00 38.03 O
ATOM 5 O5' A A 110 -38.953 -50.932 55.371 1.00 17.30 O
ATOM 6 C5' A A 110 -38.945 -51.835 56.478 1.00 17.30 C
ATOM 7 C4' A A 110 -39.626 -51.193 57.657 1.00 17.30 C
ATOM 8 O4' A A 110 -39.678 -52.118 58.767 1.00 17.30 O
ATOM 9 C3' A A 110 -38.942 -49.948 58.194 1.00 17.30 C
ATOM 10 O3' A A 110 -39.437 -48.842 57.461 1.00 17.30 O
ATOM 11 C2' A A 110 -39.393 -49.919 59.644 1.00 17.30 C
ATOM 12 O2' A A 110 -40.682 -49.351 59.756 1.00 17.30 O
ATOM 13 C1' A A 110 -39.485 -51.416 59.974 1.00 17.30 C
ATOM 14 N9 A A 110 -38.313 -52.002 60.629 1.00 3.77 N
ATOM 15 C8 A A 110 -37.002 -51.612 60.544 1.00 3.77 C
ATOM 16 N7 A A 110 -36.191 -52.341 61.269 1.00 3.77 N
ATOM 17 C5 A A 110 -37.023 -53.270 61.866 1.00 3.77 C
ATOM 18 C6 A A 110 -36.772 -54.304 62.738 1.00 3.77 C
ATOM 19 N6 A A 110 -35.558 -54.586 63.191 1.00 3.77 N
ATOM 20 N1 A A 110 -37.811 -55.059 63.142 1.00 3.77 N
ATOM 21 C2 A A 110 -39.017 -54.778 62.682 1.00 3.77 C
ATOM 22 N3 A A 110 -39.389 -53.822 61.855 1.00 3.77 N
ATOM 23 C4 A A 110 -38.327 -53.086 61.477 1.00 3.77 C
ATOM 24 P A A 111 -38.743 -47.416 57.603 1.00 33.14 P
ATOM 25 OP1 A A 111 -39.250 -46.804 58.858 1.00 33.14 O
ATOM 26 OP2 A A 111 -38.889 -46.682 56.324 1.00 33.14 O
ATOM 27 O5' A A 111 -37.211 -47.765 57.827 1.00 2.77 O
TER
ATOM 1 O3' U B 43 -30.071 -58.864 67.858 1.00 36.23 O
ATOM 2 P G B 44 -30.516 -59.635 66.515 1.00 40.70 P
ATOM 3 OP1 G B 44 -31.258 -60.871 66.890 1.00 43.62 O
ATOM 4 OP2 G B 44 -29.319 -59.738 65.646 1.00 43.75 O
ATOM 5 O5' G B 44 -31.541 -58.637 65.814 1.00 16.67 O
ATOM 6 C5' G B 44 -32.965 -58.903 65.832 1.00 16.67 C
ATOM 7 C4' G B 44 -33.616 -58.360 64.579 1.00 16.67 C
ATOM 8 O4' G B 44 -33.515 -56.915 64.609 1.00 16.67 O
ATOM 9 C3' G B 44 -32.975 -58.821 63.274 1.00 16.67 C
ATOM 10 O3' G B 44 -33.964 -59.028 62.286 1.00 16.67 O
ATOM 11 C2' G B 44 -32.059 -57.657 62.908 1.00 16.67 C
ATOM 12 O2' G B 44 -31.815 -57.499 61.528 1.00 16.67 O
ATOM 13 C1' G B 44 -32.811 -56.460 63.479 1.00 16.67 C
ATOM 14 N9 G B 44 -31.902 -55.405 63.917 1.00 24.49 N
ATOM 15 C8 G B 44 -30.761 -55.547 64.669 1.00 24.67 C
ATOM 16 N7 G B 44 -30.124 -54.422 64.846 1.00 24.80 N
ATOM 17 C5 G B 44 -30.900 -53.480 64.188 1.00 24.73 C
ATOM 18 C6 G B 44 -30.707 -52.100 64.026 1.00 24.55 C
ATOM 19 O6 G B 44 -29.772 -51.401 64.433 1.00 24.44 O
ATOM 20 N1 G B 44 -31.740 -51.527 63.301 1.00 24.57 N
ATOM 21 C2 G B 44 -32.817 -52.203 62.798 1.00 24.58 C
ATOM 22 N2 G B 44 -33.722 -51.477 62.154 1.00 24.55 N
ATOM 23 N3 G B 44 -33.000 -53.491 62.925 1.00 24.59 N
ATOM 24 C4 G B 44 -32.010 -54.067 63.627 1.00 24.69 C
ATOM 25 P A B 45 -33.931 -60.362 61.393 1.00 15.64 P
ATOM 26 OP1 A B 45 -32.936 -61.306 61.975 1.00 51.34 O
ATOM 27 OP2 A B 45 -33.835 -59.991 59.957 1.00 51.34 O
ATOM 28 O5' A B 45 -35.377 -60.985 61.630 1.00 8.43 O
TER
ATOM 2 P A A 110 -37.912 -51.106 54.187 1.00 28.27 P
ATOM 3 OP1 A A 110 -38.439 -50.393 53.005 1.00 38.06 O
ATOM 4 OP2 A A 110 -36.541 -50.798 54.682 1.00 38.03 O
ATOM 5 O5' A A 110 -38.953 -50.932 55.371 1.00 17.30 O
ATOM 6 C5' A A 110 -38.945 -51.835 56.478 1.00 17.30 C
ATOM 7 C4' A A 110 -39.626 -51.193 57.657 1.00 17.30 C
ATOM 8 O4' A A 110 -39.678 -52.118 58.767 1.00 17.30 O
ATOM 9 C3' A A 110 -38.942 -49.948 58.194 1.00 17.30 C
ATOM 10 O3' A A 110 -39.437 -48.842 57.461 1.00 17.30 O
ATOM 11 C2' A A 110 -39.393 -49.919 59.644 1.00 17.30 C
ATOM 12 O2' A A 110 -40.682 -49.351 59.756 1.00 17.30 O
ATOM 13 C1' A A 110 -39.485 -51.416 59.974 1.00 17.30 C
ATOM 14 N9 A A 110 -38.313 -52.002 60.629 1.00 3.77 N
ATOM 15 C8 A A 110 -37.002 -51.612 60.544 1.00 3.77 C
ATOM 16 N7 A A 110 -36.191 -52.341 61.269 1.00 3.77 N
ATOM 17 C5 A A 110 -37.023 -53.270 61.866 1.00 3.77 C
ATOM 18 C6 A A 110 -36.772 -54.304 62.738 1.00 3.77 C
ATOM 19 N6 A A 110 -35.558 -54.586 63.191 1.00 3.77 N
ATOM 20 N1 A A 110 -37.811 -55.059 63.142 1.00 3.77 N
ATOM 21 C2 A A 110 -39.017 -54.778 62.682 1.00 3.77 C
ATOM 22 N3 A A 110 -39.389 -53.822 61.855 1.00 3.77 N
ATOM 23 C4 A A 110 -38.327 -53.086 61.477 1.00 3.77 C
ATOM 24 P A A 111 -38.743 -47.416 57.603 1.00 33.14 P
ATOM 25 OP1 A A 111 -39.250 -46.804 58.858 1.00 33.14 O
ATOM 26 OP2 A A 111 -38.889 -46.682 56.324 1.00 33.14 O
ATOM 27 O5' A A 111 -37.211 -47.765 57.827 1.00 2.77 O
TER
ATOM 1 O3' U B 43 -30.071 -58.864 67.858 1.00 36.23 O
ATOM 2 P G B 44 -30.516 -59.635 66.515 1.00 40.70 P
ATOM 3 OP1 G B 44 -31.258 -60.871 66.890 1.00 43.62 O
ATOM 4 OP2 G B 44 -29.319 -59.738 65.646 1.00 43.75 O
ATOM 5 O5' G B 44 -31.541 -58.637 65.814 1.00 16.67 O
ATOM 6 C5' G B 44 -32.965 -58.903 65.832 1.00 16.67 C
ATOM 7 C4' G B 44 -33.616 -58.360 64.579 1.00 16.67 C
ATOM 8 O4' G B 44 -33.515 -56.915 64.609 1.00 16.67 O
ATOM 9 C3' G B 44 -32.975 -58.821 63.274 1.00 16.67 C
ATOM 10 O3' G B 44 -33.964 -59.028 62.286 1.00 16.67 O
ATOM 11 C2' G B 44 -32.059 -57.657 62.908 1.00 16.67 C
ATOM 12 O2' G B 44 -31.815 -57.499 61.528 1.00 16.67 O
ATOM 13 C1' G B 44 -32.811 -56.460 63.479 1.00 16.67 C
ATOM 14 N9 G B 44 -31.902 -55.405 63.917 1.00 24.49 N
ATOM 15 C8 G B 44 -30.761 -55.547 64.669 1.00 24.67 C
ATOM 16 N7 G B 44 -30.124 -54.422 64.846 1.00 24.80 N
ATOM 17 C5 G B 44 -30.900 -53.480 64.188 1.00 24.73 C
ATOM 18 C6 G B 44 -30.707 -52.100 64.026 1.00 24.55 C
ATOM 19 O6 G B 44 -29.772 -51.401 64.433 1.00 24.44 O
ATOM 20 N1 G B 44 -31.740 -51.527 63.301 1.00 24.57 N
ATOM 21 C2 G B 44 -32.817 -52.203 62.798 1.00 24.58 C
ATOM 22 N2 G B 44 -33.722 -51.477 62.154 1.00 24.55 N
ATOM 23 N3 G B 44 -33.000 -53.491 62.925 1.00 24.59 N
ATOM 24 C4 G B 44 -32.010 -54.067 63.627 1.00 24.69 C
ATOM 25 P A B 45 -33.931 -60.362 61.393 1.00 15.64 P
ATOM 26 OP1 A B 45 -32.936 -61.306 61.975 1.00 51.34 O
ATOM 27 OP2 A B 45 -33.835 -59.991 59.957 1.00 51.34 O
ATOM 28 O5' A B 45 -35.377 -60.985 61.630 1.00 8.43 O
TER
Atoms:
OP1: (-38.439,-50.393,53.005)
OP2: (-36.541,-50.798,54.682)
C3': (-38.942,-49.948,58.194)
C1': (-39.485,-51.416,59.974)
C5': (-38.945,-51.835,56.478)
O4': (-39.678,-52.118,58.767)
C8: (-37.002,-51.612,60.544)
O2': (-40.682,-49.351,59.756)
C6: (-36.772,-54.304,62.738)
C5: (-37.023,-53.270,61.866)
C4: (-38.327,-53.086,61.477)
P: (-37.912,-51.106,54.187)
C4': (-39.626,-51.193,57.657)
C2': (-39.393,-49.919,59.644)
C2: (-39.017,-54.778,62.682)
N1: (-37.811,-55.059,63.142)
N3: (-39.389,-53.822,61.855)
N6: (-35.558,-54.586,63.191)
N7: (-36.191,-52.341,61.269)
N9: (-38.313,-52.002,60.629)
O5': (-38.953,-50.932,55.371)
O3': (-39.437,-48.842,57.461)
OP2: (-36.541,-50.798,54.682)
C3': (-38.942,-49.948,58.194)
C1': (-39.485,-51.416,59.974)
C5': (-38.945,-51.835,56.478)
O4': (-39.678,-52.118,58.767)
C8: (-37.002,-51.612,60.544)
O2': (-40.682,-49.351,59.756)
C6: (-36.772,-54.304,62.738)
C5: (-37.023,-53.270,61.866)
C4: (-38.327,-53.086,61.477)
P: (-37.912,-51.106,54.187)
C4': (-39.626,-51.193,57.657)
C2': (-39.393,-49.919,59.644)
C2: (-39.017,-54.778,62.682)
N1: (-37.811,-55.059,63.142)
N3: (-39.389,-53.822,61.855)
N6: (-35.558,-54.586,63.191)
N7: (-36.191,-52.341,61.269)
N9: (-38.313,-52.002,60.629)
O5': (-38.953,-50.932,55.371)
O3': (-39.437,-48.842,57.461)
OP1: (-31.258,-60.871,66.890)
OP2: (-29.319,-59.738,65.646)
C3': (-32.975,-58.821,63.274)
C1': (-32.811,-56.460,63.479)
C5': (-32.965,-58.903,65.832)
O6: (-29.772,-51.401,64.433)
O4': (-33.515,-56.915,64.609)
C8: (-30.761,-55.547,64.669)
C2: (-32.817,-52.203,62.798)
C6: (-30.707,-52.100,64.026)
C5: (-30.900,-53.480,64.188)
C4: (-32.010,-54.067,63.627)
P: (-30.516,-59.635,66.515)
C4': (-33.616,-58.360,64.579)
C2': (-32.059,-57.657,62.908)
O2': (-31.815,-57.499,61.528)
N1: (-31.740,-51.527,63.301)
N2: (-33.722,-51.477,62.154)
N3: (-33.000,-53.491,62.925)
N7: (-30.124,-54.422,64.846)
N9: (-31.902,-55.405,63.917)
O5': (-31.541,-58.637,65.814)
O3': (-33.964,-59.028,62.286)
OP2: (-29.319,-59.738,65.646)
C3': (-32.975,-58.821,63.274)
C1': (-32.811,-56.460,63.479)
C5': (-32.965,-58.903,65.832)
O6: (-29.772,-51.401,64.433)
O4': (-33.515,-56.915,64.609)
C8: (-30.761,-55.547,64.669)
C2: (-32.817,-52.203,62.798)
C6: (-30.707,-52.100,64.026)
C5: (-30.900,-53.480,64.188)
C4: (-32.010,-54.067,63.627)
P: (-30.516,-59.635,66.515)
C4': (-33.616,-58.360,64.579)
C2': (-32.059,-57.657,62.908)
O2': (-31.815,-57.499,61.528)
N1: (-31.740,-51.527,63.301)
N2: (-33.722,-51.477,62.154)
N3: (-33.000,-53.491,62.925)
N7: (-30.124,-54.422,64.846)
N9: (-31.902,-55.405,63.917)
O5': (-31.541,-58.637,65.814)
O3': (-33.964,-59.028,62.286)
Image (generated by PyMOL):