ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61578:61579

Extra

PDB:
ATOM 1 O3' A A1577 263.774 -54.325 248.306 1.00 70.59 O
ATOM 2 P G A1578 265.249 -54.112 248.912 1.00 72.92 P
ATOM 3 OP1 G A1578 265.622 -52.729 248.674 1.00 72.82 O
ATOM 4 OP2 G A1578 266.111 -55.183 248.364 1.00 73.53 O
ATOM 5 O5' G A1578 265.014 -54.328 250.477 1.00 72.65 O
ATOM 6 C5' G A1578 264.711 -55.613 251.019 1.00 72.71 C
ATOM 7 C4' G A1578 263.234 -55.945 250.934 1.00 72.29 C
ATOM 8 O4' G A1578 263.102 -57.276 250.365 1.00 72.59 O
ATOM 9 C3' G A1578 262.491 -56.009 252.270 1.00 71.89 C
ATOM 10 O3' G A1578 261.086 -55.867 252.007 1.00 71.48 O
ATOM 11 C2' G A1578 262.785 -57.437 252.679 1.00 72.20 C
ATOM 12 O2' G A1578 261.954 -57.944 253.693 1.00 71.91 O
ATOM 13 C1' G A1578 262.567 -58.146 251.345 1.00 72.45 C
ATOM 14 N9 G A1578 263.230 -59.446 251.226 1.00 72.94 N
ATOM 15 C8 G A1578 264.355 -59.901 251.851 1.00 73.31 C
ATOM 16 N7 G A1578 264.654 -61.128 251.512 1.00 73.72 N
ATOM 17 C5 G A1578 263.664 -61.489 250.628 1.00 73.61 C
ATOM 18 C6 G A1578 263.460 -62.684 249.943 1.00 73.92 C
ATOM 19 O6 G A1578 264.154 -63.678 250.000 1.00 74.37 O
ATOM 20 N1 G A1578 262.340 -62.665 249.139 1.00 73.70 N
ATOM 21 C2 G A1578 261.494 -61.603 249.005 1.00 73.22 C
ATOM 22 N2 G A1578 260.448 -61.778 248.185 1.00 73.10 N
ATOM 23 N3 G A1578 261.673 -60.453 249.638 1.00 72.92 N
ATOM 24 C4 G A1578 262.775 -60.468 250.427 1.00 73.13 C
ATOM 25 P U A1579 259.984 -55.633 253.186 1.00 59.76 P
ATOM 26 OP1 U A1579 260.653 -55.015 254.361 1.00 59.72 O
ATOM 27 OP2 U A1579 259.260 -56.920 253.368 1.00 59.78 O
ATOM 28 O5' U A1579 259.013 -54.570 252.527 1.00 59.40 O
TER

ATOM 1 O3' G B1578 261.086 -55.867 252.007 1.00 71.48 O
ATOM 2 P U B1579 259.984 -55.633 253.186 1.00 59.76 P
ATOM 3 OP1 U B1579 260.653 -55.015 254.361 1.00 59.72 O
ATOM 4 OP2 U B1579 259.260 -56.920 253.368 1.00 59.78 O
ATOM 5 O5' U B1579 259.013 -54.570 252.527 1.00 59.40 O
ATOM 6 C5' U B1579 259.470 -53.280 252.174 1.00 59.33 C
ATOM 7 C4' U B1579 258.738 -52.801 250.978 1.00 59.19 C
ATOM 8 O4' U B1579 259.300 -53.430 249.814 1.00 59.59 O
ATOM 9 C3' U B1579 257.277 -53.176 250.959 1.00 58.90 C
ATOM 10 O3' U B1579 256.472 -52.218 251.613 1.00 58.49 O
ATOM 11 C2' U B1579 256.952 -53.359 249.480 1.00 59.04 C
ATOM 12 O2' U B1579 256.574 -52.127 248.884 1.00 58.80 O
ATOM 13 C1' U B1579 258.300 -53.783 248.903 1.00 59.51 C
ATOM 14 N1 U B1579 258.395 -55.235 248.658 1.00 59.85 N
ATOM 15 C2 U B1579 257.592 -55.822 247.705 1.00 59.91 C
ATOM 16 O2 U B1579 256.764 -55.227 247.065 1.00 59.69 O
ATOM 17 N3 U B1579 257.750 -57.163 247.535 1.00 60.25 N
ATOM 18 C4 U B1579 258.618 -57.980 248.189 1.00 60.54 C
ATOM 19 O4 U B1579 258.595 -59.150 247.876 1.00 60.83 O
ATOM 20 C5 U B1579 259.458 -57.336 249.151 1.00 60.47 C
ATOM 21 C6 U B1579 259.321 -56.006 249.344 1.00 60.14 C
ATOM 22 P A B1580 255.153 -52.676 252.408 1.00 61.01 P
ATOM 23 OP1 A B1580 254.536 -51.436 252.960 1.00 60.65 O
ATOM 24 OP2 A B1580 255.550 -53.763 253.350 1.00 61.19 O
ATOM 25 O5' A B1580 254.242 -53.279 251.251 1.00 61.05 O
TER

Atoms:
OP1: (265.622,-52.729,248.674)
OP2: (266.111,-55.183,248.364)
C3': (262.491,-56.009,252.270)
C1': (262.567,-58.146,251.345)
C5': (264.711,-55.613,251.019)
O6: (264.154,-63.678,250.000)
O4': (263.102,-57.276,250.365)
C8: (264.355,-59.901,251.851)
C2: (261.494,-61.603,249.005)
C6: (263.460,-62.684,249.943)
C5: (263.664,-61.489,250.628)
C4: (262.775,-60.468,250.427)
P: (265.249,-54.112,248.912)
C4': (263.234,-55.945,250.934)
C2': (262.785,-57.437,252.679)
O2': (261.954,-57.944,253.693)
N1: (262.340,-62.665,249.139)
N2: (260.448,-61.778,248.185)
N3: (261.673,-60.453,249.638)
N7: (264.654,-61.128,251.512)
N9: (263.230,-59.446,251.226)
O5': (265.014,-54.328,250.477)
O3': (261.086,-55.867,252.007)
C4: (258.618,-57.980,248.189)
N3: (257.750,-57.163,247.535)
OP1: (260.653,-55.015,254.361)
OP2: (259.260,-56.920,253.368)
C2: (257.592,-55.822,247.705)
C1': (258.300,-53.783,248.903)
C3': (257.277,-53.176,250.959)
O5': (259.013,-54.570,252.527)
O4': (259.300,-53.430,249.814)
C5': (259.470,-53.280,252.174)
P: (259.984,-55.633,253.186)
C4': (258.738,-52.801,250.978)
C2': (256.952,-53.359,249.480)
O2': (256.574,-52.127,248.884)
N1: (258.395,-55.235,248.658)
O4: (258.595,-59.150,247.876)
O2: (256.764,-55.227,247.065)
C6: (259.321,-56.006,249.344)
C5: (259.458,-57.336,249.151)
O3': (256.472,-52.218,251.613)
Image (generated by PyMOL):
PyMOL image
show in jmol