Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2366:A2368
Extra
PDB:
ATOM 1 O3' G A2365 57.489 111.034 124.517 1.00 38.48 O
ATOM 2 P G A2366 56.763 111.256 123.104 1.00 39.31 P
ATOM 3 OP1 G A2366 56.119 112.574 123.273 1.00 39.11 O
ATOM 4 OP2 G A2366 55.952 110.092 122.645 1.00 36.54 O
ATOM 5 O5' G A2366 57.972 111.466 122.111 1.00 39.13 O
ATOM 6 C5' G A2366 58.827 112.584 122.280 1.00 40.29 C
ATOM 7 C4' G A2366 60.062 112.390 121.462 1.00 43.61 C
ATOM 8 O4' G A2366 60.595 111.056 121.725 1.00 44.02 O
ATOM 9 C3' G A2366 59.805 112.445 119.968 1.00 43.50 C
ATOM 10 O3' G A2366 60.975 112.972 119.355 1.00 46.36 O
ATOM 11 C2' G A2366 59.557 110.980 119.635 1.00 42.97 C
ATOM 12 O2' G A2366 59.653 110.665 118.261 1.00 41.81 O
ATOM 13 C1' G A2366 60.589 110.296 120.539 1.00 43.94 C
ATOM 14 N9 G A2366 60.279 108.913 120.886 1.00 44.42 N
ATOM 15 C8 G A2366 59.066 108.436 121.303 1.00 44.88 C
ATOM 16 N7 G A2366 59.048 107.145 121.464 1.00 45.10 N
ATOM 17 C5 G A2366 60.332 106.740 121.145 1.00 45.19 C
ATOM 18 C6 G A2366 60.886 105.445 121.104 1.00 45.90 C
ATOM 19 O6 G A2366 60.313 104.363 121.305 1.00 46.87 O
ATOM 20 N1 G A2366 62.244 105.471 120.772 1.00 44.75 N
ATOM 21 C2 G A2366 62.965 106.600 120.505 1.00 43.40 C
ATOM 22 N2 G A2366 64.262 106.416 120.274 1.00 40.83 N
ATOM 23 N3 G A2366 62.442 107.826 120.488 1.00 44.78 N
ATOM 24 C4 G A2366 61.123 107.818 120.821 1.00 44.98 C
ATOM 25 P C A2367 61.091 114.554 119.094 1.00 47.88 P
ATOM 26 OP1 C A2367 60.343 115.273 120.147 1.00 46.01 O
ATOM 27 OP2 C A2367 60.761 114.789 117.679 1.00 48.46 O
ATOM 28 O5' C A2367 62.642 114.853 119.250 1.00 51.91 O
TER
ATOM 1 O3' C B2367 65.954 114.991 118.411 1.00 59.89 O
ATOM 2 P U B2368 66.441 114.078 117.187 1.00 58.49 P
ATOM 3 OP1 U B2368 66.796 115.016 116.101 1.00 59.04 O
ATOM 4 OP2 U B2368 65.397 113.040 116.940 1.00 59.24 O
ATOM 5 O5' U B2368 67.786 113.394 117.720 1.00 56.52 O
ATOM 6 C5' U B2368 68.958 114.186 118.017 1.00 52.11 C
ATOM 7 C4' U B2368 70.193 113.309 118.168 1.00 51.53 C
ATOM 8 O4' U B2368 70.077 112.476 119.347 1.00 49.09 O
ATOM 9 C3' U B2368 70.524 112.360 117.023 1.00 50.90 C
ATOM 10 O3' U B2368 71.289 113.005 116.000 1.00 51.43 O
ATOM 11 C2' U B2368 71.328 111.262 117.712 1.00 49.81 C
ATOM 12 O2' U B2368 72.698 111.538 117.841 1.00 48.93 O
ATOM 13 C1' U B2368 70.689 111.224 119.104 1.00 50.00 C
ATOM 14 N1 U B2368 69.668 110.174 119.222 1.00 51.85 N
ATOM 15 C2 U B2368 70.098 108.865 119.317 1.00 53.43 C
ATOM 16 O2 U B2368 71.278 108.557 119.371 1.00 55.60 O
ATOM 17 N3 U B2368 69.093 107.931 119.354 1.00 52.75 N
ATOM 18 C4 U B2368 67.737 108.168 119.336 1.00 51.98 C
ATOM 19 O4 U B2368 66.956 107.218 119.368 1.00 51.96 O
ATOM 20 C5 U B2368 67.378 109.542 119.274 1.00 50.97 C
ATOM 21 C6 U B2368 68.328 110.474 119.217 1.00 50.95 C
ATOM 22 P U B2369 71.138 112.530 114.471 1.00 53.99 P
ATOM 23 OP1 U B2369 72.093 113.253 113.586 1.00 54.50 O
ATOM 24 OP2 U B2369 69.698 112.560 114.152 1.00 55.14 O
ATOM 25 O5' U B2369 71.597 111.005 114.499 1.00 53.91 O
TER
ATOM 2 P G A2366 56.763 111.256 123.104 1.00 39.31 P
ATOM 3 OP1 G A2366 56.119 112.574 123.273 1.00 39.11 O
ATOM 4 OP2 G A2366 55.952 110.092 122.645 1.00 36.54 O
ATOM 5 O5' G A2366 57.972 111.466 122.111 1.00 39.13 O
ATOM 6 C5' G A2366 58.827 112.584 122.280 1.00 40.29 C
ATOM 7 C4' G A2366 60.062 112.390 121.462 1.00 43.61 C
ATOM 8 O4' G A2366 60.595 111.056 121.725 1.00 44.02 O
ATOM 9 C3' G A2366 59.805 112.445 119.968 1.00 43.50 C
ATOM 10 O3' G A2366 60.975 112.972 119.355 1.00 46.36 O
ATOM 11 C2' G A2366 59.557 110.980 119.635 1.00 42.97 C
ATOM 12 O2' G A2366 59.653 110.665 118.261 1.00 41.81 O
ATOM 13 C1' G A2366 60.589 110.296 120.539 1.00 43.94 C
ATOM 14 N9 G A2366 60.279 108.913 120.886 1.00 44.42 N
ATOM 15 C8 G A2366 59.066 108.436 121.303 1.00 44.88 C
ATOM 16 N7 G A2366 59.048 107.145 121.464 1.00 45.10 N
ATOM 17 C5 G A2366 60.332 106.740 121.145 1.00 45.19 C
ATOM 18 C6 G A2366 60.886 105.445 121.104 1.00 45.90 C
ATOM 19 O6 G A2366 60.313 104.363 121.305 1.00 46.87 O
ATOM 20 N1 G A2366 62.244 105.471 120.772 1.00 44.75 N
ATOM 21 C2 G A2366 62.965 106.600 120.505 1.00 43.40 C
ATOM 22 N2 G A2366 64.262 106.416 120.274 1.00 40.83 N
ATOM 23 N3 G A2366 62.442 107.826 120.488 1.00 44.78 N
ATOM 24 C4 G A2366 61.123 107.818 120.821 1.00 44.98 C
ATOM 25 P C A2367 61.091 114.554 119.094 1.00 47.88 P
ATOM 26 OP1 C A2367 60.343 115.273 120.147 1.00 46.01 O
ATOM 27 OP2 C A2367 60.761 114.789 117.679 1.00 48.46 O
ATOM 28 O5' C A2367 62.642 114.853 119.250 1.00 51.91 O
TER
ATOM 1 O3' C B2367 65.954 114.991 118.411 1.00 59.89 O
ATOM 2 P U B2368 66.441 114.078 117.187 1.00 58.49 P
ATOM 3 OP1 U B2368 66.796 115.016 116.101 1.00 59.04 O
ATOM 4 OP2 U B2368 65.397 113.040 116.940 1.00 59.24 O
ATOM 5 O5' U B2368 67.786 113.394 117.720 1.00 56.52 O
ATOM 6 C5' U B2368 68.958 114.186 118.017 1.00 52.11 C
ATOM 7 C4' U B2368 70.193 113.309 118.168 1.00 51.53 C
ATOM 8 O4' U B2368 70.077 112.476 119.347 1.00 49.09 O
ATOM 9 C3' U B2368 70.524 112.360 117.023 1.00 50.90 C
ATOM 10 O3' U B2368 71.289 113.005 116.000 1.00 51.43 O
ATOM 11 C2' U B2368 71.328 111.262 117.712 1.00 49.81 C
ATOM 12 O2' U B2368 72.698 111.538 117.841 1.00 48.93 O
ATOM 13 C1' U B2368 70.689 111.224 119.104 1.00 50.00 C
ATOM 14 N1 U B2368 69.668 110.174 119.222 1.00 51.85 N
ATOM 15 C2 U B2368 70.098 108.865 119.317 1.00 53.43 C
ATOM 16 O2 U B2368 71.278 108.557 119.371 1.00 55.60 O
ATOM 17 N3 U B2368 69.093 107.931 119.354 1.00 52.75 N
ATOM 18 C4 U B2368 67.737 108.168 119.336 1.00 51.98 C
ATOM 19 O4 U B2368 66.956 107.218 119.368 1.00 51.96 O
ATOM 20 C5 U B2368 67.378 109.542 119.274 1.00 50.97 C
ATOM 21 C6 U B2368 68.328 110.474 119.217 1.00 50.95 C
ATOM 22 P U B2369 71.138 112.530 114.471 1.00 53.99 P
ATOM 23 OP1 U B2369 72.093 113.253 113.586 1.00 54.50 O
ATOM 24 OP2 U B2369 69.698 112.560 114.152 1.00 55.14 O
ATOM 25 O5' U B2369 71.597 111.005 114.499 1.00 53.91 O
TER
Atoms:
OP1: (56.119,112.574,123.273)
OP2: (55.952,110.092,122.645)
C3': (59.805,112.445,119.968)
C1': (60.589,110.296,120.539)
C5': (58.827,112.584,122.280)
O6: (60.313,104.363,121.305)
O4': (60.595,111.056,121.725)
C8: (59.066,108.436,121.303)
C2: (62.965,106.600,120.505)
C6: (60.886,105.445,121.104)
C5: (60.332,106.740,121.145)
C4: (61.123,107.818,120.821)
P: (56.763,111.256,123.104)
C4': (60.062,112.390,121.462)
C2': (59.557,110.980,119.635)
O2': (59.653,110.665,118.261)
N1: (62.244,105.471,120.772)
N2: (64.262,106.416,120.274)
N3: (62.442,107.826,120.488)
N7: (59.048,107.145,121.464)
N9: (60.279,108.913,120.886)
O5': (57.972,111.466,122.111)
O3': (60.975,112.972,119.355)
OP2: (55.952,110.092,122.645)
C3': (59.805,112.445,119.968)
C1': (60.589,110.296,120.539)
C5': (58.827,112.584,122.280)
O6: (60.313,104.363,121.305)
O4': (60.595,111.056,121.725)
C8: (59.066,108.436,121.303)
C2: (62.965,106.600,120.505)
C6: (60.886,105.445,121.104)
C5: (60.332,106.740,121.145)
C4: (61.123,107.818,120.821)
P: (56.763,111.256,123.104)
C4': (60.062,112.390,121.462)
C2': (59.557,110.980,119.635)
O2': (59.653,110.665,118.261)
N1: (62.244,105.471,120.772)
N2: (64.262,106.416,120.274)
N3: (62.442,107.826,120.488)
N7: (59.048,107.145,121.464)
N9: (60.279,108.913,120.886)
O5': (57.972,111.466,122.111)
O3': (60.975,112.972,119.355)
C4: (67.737,108.168,119.336)
N3: (69.093,107.931,119.354)
OP1: (66.796,115.016,116.101)
OP2: (65.397,113.040,116.940)
C2: (70.098,108.865,119.317)
C1': (70.689,111.224,119.104)
C3': (70.524,112.360,117.023)
O5': (67.786,113.394,117.720)
O4': (70.077,112.476,119.347)
C5': (68.958,114.186,118.017)
P: (66.441,114.078,117.187)
C4': (70.193,113.309,118.168)
C2': (71.328,111.262,117.712)
O2': (72.698,111.538,117.841)
N1: (69.668,110.174,119.222)
O4: (66.956,107.218,119.368)
O2: (71.278,108.557,119.371)
C6: (68.328,110.474,119.217)
C5: (67.378,109.542,119.274)
O3': (71.289,113.005,116.000)
N3: (69.093,107.931,119.354)
OP1: (66.796,115.016,116.101)
OP2: (65.397,113.040,116.940)
C2: (70.098,108.865,119.317)
C1': (70.689,111.224,119.104)
C3': (70.524,112.360,117.023)
O5': (67.786,113.394,117.720)
O4': (70.077,112.476,119.347)
C5': (68.958,114.186,118.017)
P: (66.441,114.078,117.187)
C4': (70.193,113.309,118.168)
C2': (71.328,111.262,117.712)
O2': (72.698,111.538,117.841)
N1: (69.668,110.174,119.222)
O4: (66.956,107.218,119.368)
O2: (71.278,108.557,119.371)
C6: (68.328,110.474,119.217)
C5: (67.378,109.542,119.274)
O3': (71.289,113.005,116.000)
Image (generated by PyMOL):