Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2560:A2561
Extra
PDB:
ATOM 1 O3' A A2559 93.145 -49.349 66.279 1.00 95.74 O
ATOM 2 P G A2560 93.180 -48.509 67.665 1.00 91.03 P
ATOM 3 OP1 G A2560 94.383 -48.788 68.494 1.00 81.07 O
ATOM 4 OP2 G A2560 91.820 -48.654 68.264 1.00 94.43 O
ATOM 5 O5' G A2560 93.289 -46.997 67.161 1.00 92.99 O
ATOM 6 C5' G A2560 94.381 -46.155 67.552 1.00 93.93 C
ATOM 7 C4' G A2560 95.557 -46.377 66.633 1.00 90.39 C
ATOM 8 O4' G A2560 95.130 -46.196 65.254 1.00 90.59 O
ATOM 9 C3' G A2560 96.802 -45.505 66.829 1.00 89.49 C
ATOM 10 O3' G A2560 97.949 -46.379 66.737 1.00 91.13 O
ATOM 11 C2' G A2560 96.685 -44.498 65.681 1.00 89.29 C
ATOM 12 O2' G A2560 97.890 -43.920 65.219 1.00 93.79 O
ATOM 13 C1' G A2560 96.047 -45.359 64.595 1.00 88.83 C
ATOM 14 N9 G A2560 95.377 -44.634 63.522 1.00 93.50 N
ATOM 15 C8 G A2560 94.875 -43.353 63.550 1.00 97.51 C
ATOM 16 N7 G A2560 94.431 -42.947 62.390 1.00 96.07 N
ATOM 17 C5 G A2560 94.622 -44.033 61.550 1.00 92.08 C
ATOM 18 C6 G A2560 94.352 -44.182 60.164 1.00 92.74 C
ATOM 19 O6 G A2560 93.885 -43.341 59.372 1.00 93.93 O
ATOM 20 N1 G A2560 94.695 -45.455 59.713 1.00 95.45 N
ATOM 21 C2 G A2560 95.242 -46.450 60.487 1.00 91.72 C
ATOM 22 N2 G A2560 95.490 -47.611 59.863 1.00 81.97 N
ATOM 23 N3 G A2560 95.518 -46.316 61.776 1.00 89.20 N
ATOM 24 C4 G A2560 95.182 -45.094 62.239 1.00 91.19 C
ATOM 25 P U A2561 99.405 -45.819 66.297 1.00 94.94 P
ATOM 26 OP1 U A2561 99.812 -44.637 67.105 1.00 88.48 O
ATOM 27 OP2 U A2561 99.360 -45.711 64.816 1.00 92.31 O
ATOM 28 O5' U A2561 100.407 -47.020 66.612 1.00 82.74 O
TER
ATOM 1 O3' G B2560 97.949 -46.379 66.737 1.00 91.13 O
ATOM 2 P U B2561 99.405 -45.819 66.297 1.00 94.94 P
ATOM 3 OP1 U B2561 99.812 -44.637 67.105 1.00 88.48 O
ATOM 4 OP2 U B2561 99.360 -45.711 64.816 1.00 92.31 O
ATOM 5 O5' U B2561 100.407 -47.020 66.612 1.00 82.74 O
ATOM 6 C5' U B2561 100.308 -47.756 67.821 1.00 76.61 C
ATOM 7 C4' U B2561 100.273 -49.234 67.536 1.00 74.73 C
ATOM 8 O4' U B2561 99.074 -49.558 66.793 1.00 77.24 O
ATOM 9 C3' U B2561 101.394 -49.812 66.698 1.00 72.60 C
ATOM 10 O3' U B2561 102.504 -50.090 67.513 1.00 73.22 O
ATOM 11 C2' U B2561 100.782 -51.092 66.168 1.00 76.00 C
ATOM 12 O2' U B2561 100.792 -52.104 67.153 1.00 64.05 O
ATOM 13 C1' U B2561 99.333 -50.656 65.933 1.00 77.28 C
ATOM 14 N1 U B2561 99.007 -50.264 64.546 1.00 78.54 N
ATOM 15 C2 U B2561 99.484 -51.041 63.469 1.00 77.82 C
ATOM 16 O2 U B2561 100.220 -52.018 63.603 1.00 73.89 O
ATOM 17 N3 U B2561 99.073 -50.620 62.230 1.00 78.08 N
ATOM 18 C4 U B2561 98.285 -49.531 61.949 1.00 82.44 C
ATOM 19 O4 U B2561 98.001 -49.277 60.776 1.00 83.65 O
ATOM 20 C5 U B2561 97.868 -48.782 63.092 1.00 84.12 C
ATOM 21 C6 U B2561 98.233 -49.163 64.313 1.00 80.51 C
ATOM 22 P A B2562 103.953 -49.620 67.040 1.00 76.56 P
ATOM 23 OP1 A B2562 104.852 -49.885 68.200 1.00 79.50 O
ATOM 24 OP2 A B2562 103.869 -48.252 66.445 1.00 78.89 O
ATOM 25 O5' A B2562 104.324 -50.635 65.878 1.00 72.13 O
TER
ATOM 2 P G A2560 93.180 -48.509 67.665 1.00 91.03 P
ATOM 3 OP1 G A2560 94.383 -48.788 68.494 1.00 81.07 O
ATOM 4 OP2 G A2560 91.820 -48.654 68.264 1.00 94.43 O
ATOM 5 O5' G A2560 93.289 -46.997 67.161 1.00 92.99 O
ATOM 6 C5' G A2560 94.381 -46.155 67.552 1.00 93.93 C
ATOM 7 C4' G A2560 95.557 -46.377 66.633 1.00 90.39 C
ATOM 8 O4' G A2560 95.130 -46.196 65.254 1.00 90.59 O
ATOM 9 C3' G A2560 96.802 -45.505 66.829 1.00 89.49 C
ATOM 10 O3' G A2560 97.949 -46.379 66.737 1.00 91.13 O
ATOM 11 C2' G A2560 96.685 -44.498 65.681 1.00 89.29 C
ATOM 12 O2' G A2560 97.890 -43.920 65.219 1.00 93.79 O
ATOM 13 C1' G A2560 96.047 -45.359 64.595 1.00 88.83 C
ATOM 14 N9 G A2560 95.377 -44.634 63.522 1.00 93.50 N
ATOM 15 C8 G A2560 94.875 -43.353 63.550 1.00 97.51 C
ATOM 16 N7 G A2560 94.431 -42.947 62.390 1.00 96.07 N
ATOM 17 C5 G A2560 94.622 -44.033 61.550 1.00 92.08 C
ATOM 18 C6 G A2560 94.352 -44.182 60.164 1.00 92.74 C
ATOM 19 O6 G A2560 93.885 -43.341 59.372 1.00 93.93 O
ATOM 20 N1 G A2560 94.695 -45.455 59.713 1.00 95.45 N
ATOM 21 C2 G A2560 95.242 -46.450 60.487 1.00 91.72 C
ATOM 22 N2 G A2560 95.490 -47.611 59.863 1.00 81.97 N
ATOM 23 N3 G A2560 95.518 -46.316 61.776 1.00 89.20 N
ATOM 24 C4 G A2560 95.182 -45.094 62.239 1.00 91.19 C
ATOM 25 P U A2561 99.405 -45.819 66.297 1.00 94.94 P
ATOM 26 OP1 U A2561 99.812 -44.637 67.105 1.00 88.48 O
ATOM 27 OP2 U A2561 99.360 -45.711 64.816 1.00 92.31 O
ATOM 28 O5' U A2561 100.407 -47.020 66.612 1.00 82.74 O
TER
ATOM 1 O3' G B2560 97.949 -46.379 66.737 1.00 91.13 O
ATOM 2 P U B2561 99.405 -45.819 66.297 1.00 94.94 P
ATOM 3 OP1 U B2561 99.812 -44.637 67.105 1.00 88.48 O
ATOM 4 OP2 U B2561 99.360 -45.711 64.816 1.00 92.31 O
ATOM 5 O5' U B2561 100.407 -47.020 66.612 1.00 82.74 O
ATOM 6 C5' U B2561 100.308 -47.756 67.821 1.00 76.61 C
ATOM 7 C4' U B2561 100.273 -49.234 67.536 1.00 74.73 C
ATOM 8 O4' U B2561 99.074 -49.558 66.793 1.00 77.24 O
ATOM 9 C3' U B2561 101.394 -49.812 66.698 1.00 72.60 C
ATOM 10 O3' U B2561 102.504 -50.090 67.513 1.00 73.22 O
ATOM 11 C2' U B2561 100.782 -51.092 66.168 1.00 76.00 C
ATOM 12 O2' U B2561 100.792 -52.104 67.153 1.00 64.05 O
ATOM 13 C1' U B2561 99.333 -50.656 65.933 1.00 77.28 C
ATOM 14 N1 U B2561 99.007 -50.264 64.546 1.00 78.54 N
ATOM 15 C2 U B2561 99.484 -51.041 63.469 1.00 77.82 C
ATOM 16 O2 U B2561 100.220 -52.018 63.603 1.00 73.89 O
ATOM 17 N3 U B2561 99.073 -50.620 62.230 1.00 78.08 N
ATOM 18 C4 U B2561 98.285 -49.531 61.949 1.00 82.44 C
ATOM 19 O4 U B2561 98.001 -49.277 60.776 1.00 83.65 O
ATOM 20 C5 U B2561 97.868 -48.782 63.092 1.00 84.12 C
ATOM 21 C6 U B2561 98.233 -49.163 64.313 1.00 80.51 C
ATOM 22 P A B2562 103.953 -49.620 67.040 1.00 76.56 P
ATOM 23 OP1 A B2562 104.852 -49.885 68.200 1.00 79.50 O
ATOM 24 OP2 A B2562 103.869 -48.252 66.445 1.00 78.89 O
ATOM 25 O5' A B2562 104.324 -50.635 65.878 1.00 72.13 O
TER
Atoms:
OP1: (94.383,-48.788,68.494)
OP2: (91.820,-48.654,68.264)
C3': (96.802,-45.505,66.829)
C1': (96.047,-45.359,64.595)
C5': (94.381,-46.155,67.552)
O6: (93.885,-43.341,59.372)
O4': (95.130,-46.196,65.254)
C8: (94.875,-43.353,63.550)
C2: (95.242,-46.450,60.487)
C6: (94.352,-44.182,60.164)
C5: (94.622,-44.033,61.550)
C4: (95.182,-45.094,62.239)
P: (93.180,-48.509,67.665)
C4': (95.557,-46.377,66.633)
C2': (96.685,-44.498,65.681)
O2': (97.890,-43.920,65.219)
N1: (94.695,-45.455,59.713)
N2: (95.490,-47.611,59.863)
N3: (95.518,-46.316,61.776)
N7: (94.431,-42.947,62.390)
N9: (95.377,-44.634,63.522)
O5': (93.289,-46.997,67.161)
O3': (97.949,-46.379,66.737)
OP2: (91.820,-48.654,68.264)
C3': (96.802,-45.505,66.829)
C1': (96.047,-45.359,64.595)
C5': (94.381,-46.155,67.552)
O6: (93.885,-43.341,59.372)
O4': (95.130,-46.196,65.254)
C8: (94.875,-43.353,63.550)
C2: (95.242,-46.450,60.487)
C6: (94.352,-44.182,60.164)
C5: (94.622,-44.033,61.550)
C4: (95.182,-45.094,62.239)
P: (93.180,-48.509,67.665)
C4': (95.557,-46.377,66.633)
C2': (96.685,-44.498,65.681)
O2': (97.890,-43.920,65.219)
N1: (94.695,-45.455,59.713)
N2: (95.490,-47.611,59.863)
N3: (95.518,-46.316,61.776)
N7: (94.431,-42.947,62.390)
N9: (95.377,-44.634,63.522)
O5': (93.289,-46.997,67.161)
O3': (97.949,-46.379,66.737)
C4: (98.285,-49.531,61.949)
N3: (99.073,-50.620,62.230)
OP1: (99.812,-44.637,67.105)
OP2: (99.360,-45.711,64.816)
C2: (99.484,-51.041,63.469)
C1': (99.333,-50.656,65.933)
C3': (101.394,-49.812,66.698)
O5': (100.407,-47.020,66.612)
O4': (99.074,-49.558,66.793)
C5': (100.308,-47.756,67.821)
P: (99.405,-45.819,66.297)
C4': (100.273,-49.234,67.536)
C2': (100.782,-51.092,66.168)
O2': (100.792,-52.104,67.153)
N1: (99.007,-50.264,64.546)
O4: (98.001,-49.277,60.776)
O2: (100.220,-52.018,63.603)
C6: (98.233,-49.163,64.313)
C5: (97.868,-48.782,63.092)
O3': (102.504,-50.090,67.513)
N3: (99.073,-50.620,62.230)
OP1: (99.812,-44.637,67.105)
OP2: (99.360,-45.711,64.816)
C2: (99.484,-51.041,63.469)
C1': (99.333,-50.656,65.933)
C3': (101.394,-49.812,66.698)
O5': (100.407,-47.020,66.612)
O4': (99.074,-49.558,66.793)
C5': (100.308,-47.756,67.821)
P: (99.405,-45.819,66.297)
C4': (100.273,-49.234,67.536)
C2': (100.782,-51.092,66.168)
O2': (100.792,-52.104,67.153)
N1: (99.007,-50.264,64.546)
O4: (98.001,-49.277,60.776)
O2: (100.220,-52.018,63.603)
C6: (98.233,-49.163,64.313)
C5: (97.868,-48.782,63.092)
O3': (102.504,-50.090,67.513)
Image (generated by PyMOL):