Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A47:A48
Extra
PDB:
ATOM 1 O3' C A 46 -47.138 -11.893 5.939 1.00 33.62 O
ATOM 2 P G A 47 -48.709 -11.550 5.881 1.00 36.53 P
ATOM 3 OP1 G A 47 -49.285 -12.145 4.641 1.00 37.88 O
ATOM 4 OP2 G A 47 -48.941 -10.128 6.167 1.00 34.75 O
ATOM 5 O5' G A 47 -49.305 -12.391 7.083 1.00 34.89 O
ATOM 6 C5' G A 47 -50.705 -12.450 7.261 1.00 39.39 C
ATOM 7 C4' G A 47 -51.034 -13.105 8.575 1.00 41.27 C
ATOM 8 O4' G A 47 -50.826 -12.146 9.645 1.00 41.62 O
ATOM 9 C3' G A 47 -52.479 -13.540 8.715 1.00 43.72 C
ATOM 10 O3' G A 47 -52.528 -14.656 9.595 1.00 46.37 O
ATOM 11 C2' G A 47 -53.138 -12.303 9.305 1.00 43.13 C
ATOM 12 O2' G A 47 -54.347 -12.606 9.952 1.00 43.99 O
ATOM 13 C1' G A 47 -52.055 -11.850 10.281 1.00 41.44 C
ATOM 14 N9 G A 47 -52.030 -10.433 10.634 1.00 40.81 N
ATOM 15 C8 G A 47 -52.397 -9.349 9.862 1.00 40.47 C
ATOM 16 N7 G A 47 -52.230 -8.203 10.479 1.00 40.07 N
ATOM 17 C5 G A 47 -51.737 -8.556 11.734 1.00 39.34 C
ATOM 18 C6 G A 47 -51.371 -7.745 12.845 1.00 39.72 C
ATOM 19 O6 G A 47 -51.425 -6.500 12.948 1.00 38.62 O
ATOM 20 N1 G A 47 -50.906 -8.524 13.919 1.00 38.21 N
ATOM 21 C2 G A 47 -50.819 -9.892 13.928 1.00 37.28 C
ATOM 22 N2 G A 47 -50.381 -10.465 15.075 1.00 33.57 N
ATOM 23 N3 G A 47 -51.150 -10.654 12.895 1.00 38.03 N
ATOM 24 C4 G A 47 -51.601 -9.924 11.843 1.00 39.77 C
ATOM 25 P U A 48 -53.084 -16.046 9.052 1.00 48.65 P
ATOM 26 OP1 U A 48 -52.978 -15.982 7.561 1.00 50.10 O
ATOM 27 OP2 U A 48 -54.393 -16.262 9.691 1.00 50.07 O
ATOM 28 O5' U A 48 -52.098 -17.155 9.617 1.00 48.27 O
TER
ATOM 1 O3' G B 47 -52.528 -14.656 9.595 1.00 46.37 O
ATOM 2 P U B 48 -53.084 -16.046 9.052 1.00 48.65 P
ATOM 3 OP1 U B 48 -52.978 -15.982 7.561 1.00 50.10 O
ATOM 4 OP2 U B 48 -54.393 -16.262 9.691 1.00 50.07 O
ATOM 5 O5' U B 48 -52.098 -17.155 9.617 1.00 48.27 O
ATOM 6 C5' U B 48 -50.876 -17.488 8.954 1.00 46.06 C
ATOM 7 C4' U B 48 -50.032 -18.308 9.891 1.00 45.54 C
ATOM 8 O4' U B 48 -49.228 -17.380 10.672 1.00 43.44 O
ATOM 9 C3' U B 48 -50.937 -19.027 10.880 1.00 45.89 C
ATOM 10 O3' U B 48 -51.257 -20.423 10.694 1.00 49.42 O
ATOM 11 C2' U B 48 -50.673 -18.403 12.258 1.00 44.77 C
ATOM 12 O2' U B 48 -50.616 -19.334 13.311 1.00 43.25 O
ATOM 13 C1' U B 48 -49.336 -17.677 12.060 1.00 43.11 C
ATOM 14 N1 U B 48 -49.230 -16.414 12.825 1.00 39.99 N
ATOM 15 C2 U B 48 -48.693 -16.448 14.116 1.00 37.93 C
ATOM 16 O2 U B 48 -48.211 -17.434 14.598 1.00 36.22 O
ATOM 17 N3 U B 48 -48.725 -15.256 14.801 1.00 36.95 N
ATOM 18 C4 U B 48 -49.188 -14.044 14.326 1.00 37.88 C
ATOM 19 O4 U B 48 -49.215 -13.058 15.072 1.00 36.00 O
ATOM 20 C5 U B 48 -49.663 -14.082 12.970 1.00 38.40 C
ATOM 21 C6 U B 48 -49.669 -15.236 12.290 1.00 39.26 C
ATOM 22 P A B 49 -50.108 -21.526 10.491 1.00 51.34 P
ATOM 23 OP1 A B 49 -50.664 -22.875 10.659 1.00 51.13 O
ATOM 24 OP2 A B 49 -48.914 -21.136 11.297 1.00 52.09 O
ATOM 25 O5' A B 49 -49.712 -21.418 8.953 1.00 49.92 O
TER
ATOM 2 P G A 47 -48.709 -11.550 5.881 1.00 36.53 P
ATOM 3 OP1 G A 47 -49.285 -12.145 4.641 1.00 37.88 O
ATOM 4 OP2 G A 47 -48.941 -10.128 6.167 1.00 34.75 O
ATOM 5 O5' G A 47 -49.305 -12.391 7.083 1.00 34.89 O
ATOM 6 C5' G A 47 -50.705 -12.450 7.261 1.00 39.39 C
ATOM 7 C4' G A 47 -51.034 -13.105 8.575 1.00 41.27 C
ATOM 8 O4' G A 47 -50.826 -12.146 9.645 1.00 41.62 O
ATOM 9 C3' G A 47 -52.479 -13.540 8.715 1.00 43.72 C
ATOM 10 O3' G A 47 -52.528 -14.656 9.595 1.00 46.37 O
ATOM 11 C2' G A 47 -53.138 -12.303 9.305 1.00 43.13 C
ATOM 12 O2' G A 47 -54.347 -12.606 9.952 1.00 43.99 O
ATOM 13 C1' G A 47 -52.055 -11.850 10.281 1.00 41.44 C
ATOM 14 N9 G A 47 -52.030 -10.433 10.634 1.00 40.81 N
ATOM 15 C8 G A 47 -52.397 -9.349 9.862 1.00 40.47 C
ATOM 16 N7 G A 47 -52.230 -8.203 10.479 1.00 40.07 N
ATOM 17 C5 G A 47 -51.737 -8.556 11.734 1.00 39.34 C
ATOM 18 C6 G A 47 -51.371 -7.745 12.845 1.00 39.72 C
ATOM 19 O6 G A 47 -51.425 -6.500 12.948 1.00 38.62 O
ATOM 20 N1 G A 47 -50.906 -8.524 13.919 1.00 38.21 N
ATOM 21 C2 G A 47 -50.819 -9.892 13.928 1.00 37.28 C
ATOM 22 N2 G A 47 -50.381 -10.465 15.075 1.00 33.57 N
ATOM 23 N3 G A 47 -51.150 -10.654 12.895 1.00 38.03 N
ATOM 24 C4 G A 47 -51.601 -9.924 11.843 1.00 39.77 C
ATOM 25 P U A 48 -53.084 -16.046 9.052 1.00 48.65 P
ATOM 26 OP1 U A 48 -52.978 -15.982 7.561 1.00 50.10 O
ATOM 27 OP2 U A 48 -54.393 -16.262 9.691 1.00 50.07 O
ATOM 28 O5' U A 48 -52.098 -17.155 9.617 1.00 48.27 O
TER
ATOM 1 O3' G B 47 -52.528 -14.656 9.595 1.00 46.37 O
ATOM 2 P U B 48 -53.084 -16.046 9.052 1.00 48.65 P
ATOM 3 OP1 U B 48 -52.978 -15.982 7.561 1.00 50.10 O
ATOM 4 OP2 U B 48 -54.393 -16.262 9.691 1.00 50.07 O
ATOM 5 O5' U B 48 -52.098 -17.155 9.617 1.00 48.27 O
ATOM 6 C5' U B 48 -50.876 -17.488 8.954 1.00 46.06 C
ATOM 7 C4' U B 48 -50.032 -18.308 9.891 1.00 45.54 C
ATOM 8 O4' U B 48 -49.228 -17.380 10.672 1.00 43.44 O
ATOM 9 C3' U B 48 -50.937 -19.027 10.880 1.00 45.89 C
ATOM 10 O3' U B 48 -51.257 -20.423 10.694 1.00 49.42 O
ATOM 11 C2' U B 48 -50.673 -18.403 12.258 1.00 44.77 C
ATOM 12 O2' U B 48 -50.616 -19.334 13.311 1.00 43.25 O
ATOM 13 C1' U B 48 -49.336 -17.677 12.060 1.00 43.11 C
ATOM 14 N1 U B 48 -49.230 -16.414 12.825 1.00 39.99 N
ATOM 15 C2 U B 48 -48.693 -16.448 14.116 1.00 37.93 C
ATOM 16 O2 U B 48 -48.211 -17.434 14.598 1.00 36.22 O
ATOM 17 N3 U B 48 -48.725 -15.256 14.801 1.00 36.95 N
ATOM 18 C4 U B 48 -49.188 -14.044 14.326 1.00 37.88 C
ATOM 19 O4 U B 48 -49.215 -13.058 15.072 1.00 36.00 O
ATOM 20 C5 U B 48 -49.663 -14.082 12.970 1.00 38.40 C
ATOM 21 C6 U B 48 -49.669 -15.236 12.290 1.00 39.26 C
ATOM 22 P A B 49 -50.108 -21.526 10.491 1.00 51.34 P
ATOM 23 OP1 A B 49 -50.664 -22.875 10.659 1.00 51.13 O
ATOM 24 OP2 A B 49 -48.914 -21.136 11.297 1.00 52.09 O
ATOM 25 O5' A B 49 -49.712 -21.418 8.953 1.00 49.92 O
TER
Atoms:
OP1: (-49.285,-12.145,4.641)
OP2: (-48.941,-10.128,6.167)
C3': (-52.479,-13.540,8.715)
C1': (-52.055,-11.850,10.281)
C5': (-50.705,-12.450,7.261)
O6: (-51.425,-6.500,12.948)
O4': (-50.826,-12.146,9.645)
C8: (-52.397,-9.349,9.862)
C2: (-50.819,-9.892,13.928)
C6: (-51.371,-7.745,12.845)
C5: (-51.737,-8.556,11.734)
C4: (-51.601,-9.924,11.843)
P: (-48.709,-11.550,5.881)
C4': (-51.034,-13.105,8.575)
C2': (-53.138,-12.303,9.305)
O2': (-54.347,-12.606,9.952)
N1: (-50.906,-8.524,13.919)
N2: (-50.381,-10.465,15.075)
N3: (-51.150,-10.654,12.895)
N7: (-52.230,-8.203,10.479)
N9: (-52.030,-10.433,10.634)
O5': (-49.305,-12.391,7.083)
O3': (-52.528,-14.656,9.595)
OP2: (-48.941,-10.128,6.167)
C3': (-52.479,-13.540,8.715)
C1': (-52.055,-11.850,10.281)
C5': (-50.705,-12.450,7.261)
O6: (-51.425,-6.500,12.948)
O4': (-50.826,-12.146,9.645)
C8: (-52.397,-9.349,9.862)
C2: (-50.819,-9.892,13.928)
C6: (-51.371,-7.745,12.845)
C5: (-51.737,-8.556,11.734)
C4: (-51.601,-9.924,11.843)
P: (-48.709,-11.550,5.881)
C4': (-51.034,-13.105,8.575)
C2': (-53.138,-12.303,9.305)
O2': (-54.347,-12.606,9.952)
N1: (-50.906,-8.524,13.919)
N2: (-50.381,-10.465,15.075)
N3: (-51.150,-10.654,12.895)
N7: (-52.230,-8.203,10.479)
N9: (-52.030,-10.433,10.634)
O5': (-49.305,-12.391,7.083)
O3': (-52.528,-14.656,9.595)
C4: (-49.188,-14.044,14.326)
N3: (-48.725,-15.256,14.801)
OP1: (-52.978,-15.982,7.561)
OP2: (-54.393,-16.262,9.691)
C2: (-48.693,-16.448,14.116)
C1': (-49.336,-17.677,12.060)
C3': (-50.937,-19.027,10.880)
O5': (-52.098,-17.155,9.617)
O4': (-49.228,-17.380,10.672)
C5': (-50.876,-17.488,8.954)
P: (-53.084,-16.046,9.052)
C4': (-50.032,-18.308,9.891)
C2': (-50.673,-18.403,12.258)
O2': (-50.616,-19.334,13.311)
N1: (-49.230,-16.414,12.825)
O4: (-49.215,-13.058,15.072)
O2: (-48.211,-17.434,14.598)
C6: (-49.669,-15.236,12.290)
C5: (-49.663,-14.082,12.970)
O3': (-51.257,-20.423,10.694)
N3: (-48.725,-15.256,14.801)
OP1: (-52.978,-15.982,7.561)
OP2: (-54.393,-16.262,9.691)
C2: (-48.693,-16.448,14.116)
C1': (-49.336,-17.677,12.060)
C3': (-50.937,-19.027,10.880)
O5': (-52.098,-17.155,9.617)
O4': (-49.228,-17.380,10.672)
C5': (-50.876,-17.488,8.954)
P: (-53.084,-16.046,9.052)
C4': (-50.032,-18.308,9.891)
C2': (-50.673,-18.403,12.258)
O2': (-50.616,-19.334,13.311)
N1: (-49.230,-16.414,12.825)
O4: (-49.215,-13.058,15.072)
O2: (-48.211,-17.434,14.598)
C6: (-49.669,-15.236,12.290)
C5: (-49.663,-14.082,12.970)
O3': (-51.257,-20.423,10.694)
Image (generated by PyMOL):