ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:01078:01079

Extra

PDB:
ATOM 1 O3' A A1077 40.366 106.961 139.853 1.00 40.25 O
ATOM 2 P G A1078 39.706 108.404 139.634 1.00 42.03 P
ATOM 3 OP1 G A1078 40.814 109.376 139.452 1.00 44.51 O
ATOM 4 OP2 G A1078 38.671 108.663 140.674 1.00 42.82 O
ATOM 5 O5' G A1078 38.972 108.253 138.234 1.00 42.78 O
ATOM 6 C5' G A1078 37.542 108.233 138.127 1.00 38.76 C
ATOM 7 C4' G A1078 37.163 107.753 136.757 1.00 39.25 C
ATOM 8 O4' G A1078 35.720 107.676 136.626 1.00 38.96 O
ATOM 9 C3' G A1078 37.643 108.669 135.634 1.00 39.51 C
ATOM 10 O3' G A1078 37.911 107.867 134.488 1.00 41.35 O
ATOM 11 C2' G A1078 36.421 109.542 135.392 1.00 37.87 C
ATOM 12 O2' G A1078 36.377 110.123 134.107 1.00 40.14 O
ATOM 13 C1' G A1078 35.313 108.506 135.559 1.00 38.22 C
ATOM 14 N9 G A1078 33.970 109.006 135.826 1.00 34.90 N
ATOM 15 C8 G A1078 33.576 110.284 136.127 1.00 33.20 C
ATOM 16 N7 G A1078 32.282 110.409 136.219 1.00 33.78 N
ATOM 17 C5 G A1078 31.800 109.131 135.985 1.00 32.62 C
ATOM 18 C6 G A1078 30.471 108.648 135.928 1.00 33.50 C
ATOM 19 O6 G A1078 29.416 109.281 136.070 1.00 32.93 O
ATOM 20 N1 G A1078 30.437 107.285 135.665 1.00 30.53 N
ATOM 21 C2 G A1078 31.549 106.495 135.475 1.00 33.82 C
ATOM 22 N2 G A1078 31.349 105.206 135.243 1.00 29.36 N
ATOM 23 N3 G A1078 32.782 106.939 135.512 1.00 34.14 N
ATOM 24 C4 G A1078 32.833 108.255 135.768 1.00 34.50 C
ATOM 25 P U A1079 39.400 107.341 134.214 1.00 42.60 P
ATOM 26 OP1 U A1079 40.369 108.221 134.925 1.00 44.70 O
ATOM 27 OP2 U A1079 39.533 107.120 132.750 1.00 44.95 O
ATOM 28 O5' U A1079 39.455 105.923 134.908 1.00 40.87 O
TER

ATOM 1 O3' G B1078 37.911 107.867 134.488 1.00 41.35 O
ATOM 2 P U B1079 39.400 107.341 134.214 1.00 42.60 P
ATOM 3 OP1 U B1079 40.369 108.221 134.925 1.00 44.70 O
ATOM 4 OP2 U B1079 39.533 107.120 132.750 1.00 44.95 O
ATOM 5 O5' U B1079 39.455 105.923 134.908 1.00 40.87 O
ATOM 6 C5' U B1079 39.009 104.813 134.190 1.00 42.02 C
ATOM 7 C4' U B1079 39.584 103.556 134.743 1.00 41.06 C
ATOM 8 O4' U B1079 38.937 103.220 136.003 1.00 40.61 O
ATOM 9 C3' U B1079 39.245 102.447 133.776 1.00 39.62 C
ATOM 10 O3' U B1079 40.346 102.280 132.879 1.00 40.57 O
ATOM 11 C2' U B1079 38.901 101.269 134.677 1.00 39.79 C
ATOM 12 O2' U B1079 40.036 100.545 135.096 1.00 44.03 O
ATOM 13 C1' U B1079 38.262 101.986 135.876 1.00 38.00 C
ATOM 14 N1 U B1079 36.825 102.274 135.734 1.00 36.35 N
ATOM 15 C2 U B1079 35.959 101.202 135.696 1.00 34.40 C
ATOM 16 O2 U B1079 36.334 100.048 135.800 1.00 35.48 O
ATOM 17 N3 U B1079 34.636 101.530 135.531 1.00 35.45 N
ATOM 18 C4 U B1079 34.099 102.800 135.407 1.00 37.05 C
ATOM 19 O4 U B1079 32.885 102.928 135.243 1.00 36.07 O
ATOM 20 C5 U B1079 35.058 103.867 135.484 1.00 36.59 C
ATOM 21 C6 U B1079 36.353 103.576 135.637 1.00 35.30 C
ATOM 22 P G B1080 40.233 102.815 131.358 1.00 39.50 P
ATOM 23 OP1 G B1080 41.202 102.031 130.568 1.00 39.98 O
ATOM 24 OP2 G B1080 40.276 104.298 131.319 1.00 37.13 O
ATOM 25 O5' G B1080 38.788 102.346 130.890 1.00 36.20 O
TER

Atoms:
OP1: (40.814,109.376,139.452)
OP2: (38.671,108.663,140.674)
C3': (37.643,108.669,135.634)
C1': (35.313,108.506,135.559)
C5': (37.542,108.233,138.127)
O6: (29.416,109.281,136.070)
O4': (35.720,107.676,136.626)
C8: (33.576,110.284,136.127)
C2: (31.549,106.495,135.475)
C6: (30.471,108.648,135.928)
C5: (31.800,109.131,135.985)
C4: (32.833,108.255,135.768)
P: (39.706,108.404,139.634)
C4': (37.163,107.753,136.757)
C2': (36.421,109.542,135.392)
O2': (36.377,110.123,134.107)
N1: (30.437,107.285,135.665)
N2: (31.349,105.206,135.243)
N3: (32.782,106.939,135.512)
N7: (32.282,110.409,136.219)
N9: (33.970,109.006,135.826)
O5': (38.972,108.253,138.234)
O3': (37.911,107.867,134.488)
C4: (34.099,102.800,135.407)
N3: (34.636,101.530,135.531)
OP1: (40.369,108.221,134.925)
OP2: (39.533,107.120,132.750)
C2: (35.959,101.202,135.696)
C1': (38.262,101.986,135.876)
C3': (39.245,102.447,133.776)
O5': (39.455,105.923,134.908)
O4': (38.937,103.220,136.003)
C5': (39.009,104.813,134.190)
P: (39.400,107.341,134.214)
C4': (39.584,103.556,134.743)
C2': (38.901,101.269,134.677)
O2': (40.036,100.545,135.096)
N1: (36.825,102.274,135.734)
O4: (32.885,102.928,135.243)
O2: (36.334,100.048,135.800)
C6: (36.353,103.576,135.637)
C5: (35.058,103.867,135.484)
O3': (40.346,102.280,132.879)
Image (generated by PyMOL):
PyMOL image
show in jmol