Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A940:A941
Extra
PDB:
ATOM 1 O3' G A 939 54.407 63.637 99.817 1.00 46.78 O
ATOM 2 P G A 940 55.940 63.579 100.280 1.00 46.44 P
ATOM 3 OP1 G A 940 56.703 64.112 99.125 1.00 46.67 O
ATOM 4 OP2 G A 940 56.336 62.268 100.864 1.00 45.08 O
ATOM 5 O5' G A 940 55.905 64.655 101.453 1.00 47.85 O
ATOM 6 C5' G A 940 56.918 64.707 102.450 1.00 49.76 C
ATOM 7 C4' G A 940 56.351 65.216 103.757 1.00 49.70 C
ATOM 8 O4' G A 940 55.099 64.546 104.050 1.00 50.29 O
ATOM 9 C3' G A 940 57.261 64.906 104.933 1.00 51.55 C
ATOM 10 O3' G A 940 56.996 65.854 105.972 1.00 51.44 O
ATOM 11 C2' G A 940 56.791 63.499 105.312 1.00 51.70 C
ATOM 12 O2' G A 940 57.143 63.098 106.622 1.00 54.36 O
ATOM 13 C1' G A 940 55.275 63.638 105.125 1.00 51.33 C
ATOM 14 N9 G A 940 54.546 62.417 104.785 1.00 52.28 N
ATOM 15 C8 G A 940 54.885 61.501 103.822 1.00 53.22 C
ATOM 16 N7 G A 940 54.021 60.533 103.706 1.00 54.21 N
ATOM 17 C5 G A 940 53.054 60.816 104.660 1.00 54.32 C
ATOM 18 C6 G A 940 51.857 60.116 105.003 1.00 55.61 C
ATOM 19 O6 G A 940 51.394 59.075 104.504 1.00 56.42 O
ATOM 20 N1 G A 940 51.174 60.749 106.038 1.00 55.48 N
ATOM 21 C2 G A 940 51.578 61.902 106.662 1.00 54.89 C
ATOM 22 N2 G A 940 50.785 62.336 107.665 1.00 55.07 N
ATOM 23 N3 G A 940 52.677 62.571 106.339 1.00 54.43 N
ATOM 24 C4 G A 940 53.365 61.972 105.342 1.00 53.25 C
ATOM 25 P U A 941 57.743 67.288 105.989 1.00 50.85 P
ATOM 26 OP1 U A 941 58.175 67.687 104.625 1.00 47.24 O
ATOM 27 OP2 U A 941 58.733 67.316 107.108 1.00 49.91 O
ATOM 28 O5' U A 941 56.582 68.286 106.407 1.00 47.22 O
TER
ATOM 1 O3' G B 940 56.996 65.854 105.972 1.00 51.44 O
ATOM 2 P U B 941 57.743 67.288 105.989 1.00 50.85 P
ATOM 3 OP1 U B 941 58.175 67.687 104.625 1.00 47.24 O
ATOM 4 OP2 U B 941 58.733 67.316 107.108 1.00 49.91 O
ATOM 5 O5' U B 941 56.582 68.286 106.407 1.00 47.22 O
ATOM 6 C5' U B 941 56.680 69.661 106.082 1.00 44.10 C
ATOM 7 C4' U B 941 55.459 70.384 106.547 1.00 41.69 C
ATOM 8 O4' U B 941 54.292 69.848 105.872 1.00 40.55 O
ATOM 9 C3' U B 941 55.117 70.252 108.014 1.00 40.08 C
ATOM 10 O3' U B 941 55.892 71.114 108.845 1.00 39.72 O
ATOM 11 C2' U B 941 53.654 70.655 107.997 1.00 40.56 C
ATOM 12 O2' U B 941 53.540 72.057 107.825 1.00 39.80 O
ATOM 13 C1' U B 941 53.168 69.951 106.725 1.00 39.78 C
ATOM 14 N1 U B 941 52.592 68.607 106.945 1.00 38.91 N
ATOM 15 C2 U B 941 51.275 68.532 107.360 1.00 38.81 C
ATOM 16 O2 U B 941 50.558 69.519 107.479 1.00 40.04 O
ATOM 17 N3 U B 941 50.819 67.262 107.623 1.00 38.24 N
ATOM 18 C4 U B 941 51.514 66.079 107.506 1.00 39.04 C
ATOM 19 O4 U B 941 51.043 65.059 108.016 1.00 38.42 O
ATOM 20 C5 U B 941 52.848 66.227 107.011 1.00 39.45 C
ATOM 21 C6 U B 941 53.333 67.454 106.761 1.00 39.50 C
ATOM 22 P A B 942 56.029 70.787 110.408 1.00 37.00 P
ATOM 23 OP1 A B 942 56.916 71.795 111.023 1.00 37.27 O
ATOM 24 OP2 A B 942 56.408 69.374 110.455 1.00 38.25 O
ATOM 25 O5' A B 942 54.543 70.955 110.963 1.00 38.91 O
TER
ATOM 2 P G A 940 55.940 63.579 100.280 1.00 46.44 P
ATOM 3 OP1 G A 940 56.703 64.112 99.125 1.00 46.67 O
ATOM 4 OP2 G A 940 56.336 62.268 100.864 1.00 45.08 O
ATOM 5 O5' G A 940 55.905 64.655 101.453 1.00 47.85 O
ATOM 6 C5' G A 940 56.918 64.707 102.450 1.00 49.76 C
ATOM 7 C4' G A 940 56.351 65.216 103.757 1.00 49.70 C
ATOM 8 O4' G A 940 55.099 64.546 104.050 1.00 50.29 O
ATOM 9 C3' G A 940 57.261 64.906 104.933 1.00 51.55 C
ATOM 10 O3' G A 940 56.996 65.854 105.972 1.00 51.44 O
ATOM 11 C2' G A 940 56.791 63.499 105.312 1.00 51.70 C
ATOM 12 O2' G A 940 57.143 63.098 106.622 1.00 54.36 O
ATOM 13 C1' G A 940 55.275 63.638 105.125 1.00 51.33 C
ATOM 14 N9 G A 940 54.546 62.417 104.785 1.00 52.28 N
ATOM 15 C8 G A 940 54.885 61.501 103.822 1.00 53.22 C
ATOM 16 N7 G A 940 54.021 60.533 103.706 1.00 54.21 N
ATOM 17 C5 G A 940 53.054 60.816 104.660 1.00 54.32 C
ATOM 18 C6 G A 940 51.857 60.116 105.003 1.00 55.61 C
ATOM 19 O6 G A 940 51.394 59.075 104.504 1.00 56.42 O
ATOM 20 N1 G A 940 51.174 60.749 106.038 1.00 55.48 N
ATOM 21 C2 G A 940 51.578 61.902 106.662 1.00 54.89 C
ATOM 22 N2 G A 940 50.785 62.336 107.665 1.00 55.07 N
ATOM 23 N3 G A 940 52.677 62.571 106.339 1.00 54.43 N
ATOM 24 C4 G A 940 53.365 61.972 105.342 1.00 53.25 C
ATOM 25 P U A 941 57.743 67.288 105.989 1.00 50.85 P
ATOM 26 OP1 U A 941 58.175 67.687 104.625 1.00 47.24 O
ATOM 27 OP2 U A 941 58.733 67.316 107.108 1.00 49.91 O
ATOM 28 O5' U A 941 56.582 68.286 106.407 1.00 47.22 O
TER
ATOM 1 O3' G B 940 56.996 65.854 105.972 1.00 51.44 O
ATOM 2 P U B 941 57.743 67.288 105.989 1.00 50.85 P
ATOM 3 OP1 U B 941 58.175 67.687 104.625 1.00 47.24 O
ATOM 4 OP2 U B 941 58.733 67.316 107.108 1.00 49.91 O
ATOM 5 O5' U B 941 56.582 68.286 106.407 1.00 47.22 O
ATOM 6 C5' U B 941 56.680 69.661 106.082 1.00 44.10 C
ATOM 7 C4' U B 941 55.459 70.384 106.547 1.00 41.69 C
ATOM 8 O4' U B 941 54.292 69.848 105.872 1.00 40.55 O
ATOM 9 C3' U B 941 55.117 70.252 108.014 1.00 40.08 C
ATOM 10 O3' U B 941 55.892 71.114 108.845 1.00 39.72 O
ATOM 11 C2' U B 941 53.654 70.655 107.997 1.00 40.56 C
ATOM 12 O2' U B 941 53.540 72.057 107.825 1.00 39.80 O
ATOM 13 C1' U B 941 53.168 69.951 106.725 1.00 39.78 C
ATOM 14 N1 U B 941 52.592 68.607 106.945 1.00 38.91 N
ATOM 15 C2 U B 941 51.275 68.532 107.360 1.00 38.81 C
ATOM 16 O2 U B 941 50.558 69.519 107.479 1.00 40.04 O
ATOM 17 N3 U B 941 50.819 67.262 107.623 1.00 38.24 N
ATOM 18 C4 U B 941 51.514 66.079 107.506 1.00 39.04 C
ATOM 19 O4 U B 941 51.043 65.059 108.016 1.00 38.42 O
ATOM 20 C5 U B 941 52.848 66.227 107.011 1.00 39.45 C
ATOM 21 C6 U B 941 53.333 67.454 106.761 1.00 39.50 C
ATOM 22 P A B 942 56.029 70.787 110.408 1.00 37.00 P
ATOM 23 OP1 A B 942 56.916 71.795 111.023 1.00 37.27 O
ATOM 24 OP2 A B 942 56.408 69.374 110.455 1.00 38.25 O
ATOM 25 O5' A B 942 54.543 70.955 110.963 1.00 38.91 O
TER
Atoms:
OP1: (56.703,64.112,99.125)
OP2: (56.336,62.268,100.864)
C3': (57.261,64.906,104.933)
C1': (55.275,63.638,105.125)
C5': (56.918,64.707,102.450)
O6: (51.394,59.075,104.504)
O4': (55.099,64.546,104.050)
C8: (54.885,61.501,103.822)
C2: (51.578,61.902,106.662)
C6: (51.857,60.116,105.003)
C5: (53.054,60.816,104.660)
C4: (53.365,61.972,105.342)
P: (55.940,63.579,100.280)
C4': (56.351,65.216,103.757)
C2': (56.791,63.499,105.312)
O2': (57.143,63.098,106.622)
N1: (51.174,60.749,106.038)
N2: (50.785,62.336,107.665)
N3: (52.677,62.571,106.339)
N7: (54.021,60.533,103.706)
N9: (54.546,62.417,104.785)
O5': (55.905,64.655,101.453)
O3': (56.996,65.854,105.972)
OP2: (56.336,62.268,100.864)
C3': (57.261,64.906,104.933)
C1': (55.275,63.638,105.125)
C5': (56.918,64.707,102.450)
O6: (51.394,59.075,104.504)
O4': (55.099,64.546,104.050)
C8: (54.885,61.501,103.822)
C2: (51.578,61.902,106.662)
C6: (51.857,60.116,105.003)
C5: (53.054,60.816,104.660)
C4: (53.365,61.972,105.342)
P: (55.940,63.579,100.280)
C4': (56.351,65.216,103.757)
C2': (56.791,63.499,105.312)
O2': (57.143,63.098,106.622)
N1: (51.174,60.749,106.038)
N2: (50.785,62.336,107.665)
N3: (52.677,62.571,106.339)
N7: (54.021,60.533,103.706)
N9: (54.546,62.417,104.785)
O5': (55.905,64.655,101.453)
O3': (56.996,65.854,105.972)
C4: (51.514,66.079,107.506)
N3: (50.819,67.262,107.623)
OP1: (58.175,67.687,104.625)
OP2: (58.733,67.316,107.108)
C2: (51.275,68.532,107.360)
C1': (53.168,69.951,106.725)
C3': (55.117,70.252,108.014)
O5': (56.582,68.286,106.407)
O4': (54.292,69.848,105.872)
C5': (56.680,69.661,106.082)
P: (57.743,67.288,105.989)
C4': (55.459,70.384,106.547)
C2': (53.654,70.655,107.997)
O2': (53.540,72.057,107.825)
N1: (52.592,68.607,106.945)
O4: (51.043,65.059,108.016)
O2: (50.558,69.519,107.479)
C6: (53.333,67.454,106.761)
C5: (52.848,66.227,107.011)
O3': (55.892,71.114,108.845)
N3: (50.819,67.262,107.623)
OP1: (58.175,67.687,104.625)
OP2: (58.733,67.316,107.108)
C2: (51.275,68.532,107.360)
C1': (53.168,69.951,106.725)
C3': (55.117,70.252,108.014)
O5': (56.582,68.286,106.407)
O4': (54.292,69.848,105.872)
C5': (56.680,69.661,106.082)
P: (57.743,67.288,105.989)
C4': (55.459,70.384,106.547)
C2': (53.654,70.655,107.997)
O2': (53.540,72.057,107.825)
N1: (52.592,68.607,106.945)
O4: (51.043,65.059,108.016)
O2: (50.558,69.519,107.479)
C6: (53.333,67.454,106.761)
C5: (52.848,66.227,107.011)
O3': (55.892,71.114,108.845)
Image (generated by PyMOL):