Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1708:A1709
Extra
PDB:
ATOM 1 O3' U A1707 -0.036 -21.949 -27.185 1.00 51.30 O
ATOM 2 P G A1708 -0.792 -21.705 -25.792 1.00 33.05 P
ATOM 3 OP1 G A1708 0.267 -21.550 -24.752 1.00 33.05 O
ATOM 4 OP2 G A1708 -1.794 -22.791 -25.649 1.00 33.05 O
ATOM 5 O5' G A1708 -1.546 -20.312 -26.001 1.00 33.05 O
ATOM 6 C5' G A1708 -1.056 -19.112 -25.405 1.00 33.05 C
ATOM 7 C4' G A1708 -1.900 -18.650 -24.241 1.00 33.05 C
ATOM 8 O4' G A1708 -2.524 -19.799 -23.589 1.00 33.05 O
ATOM 9 C3' G A1708 -1.114 -17.937 -23.145 1.00 33.05 C
ATOM 10 O3' G A1708 -1.952 -16.968 -22.508 1.00 33.05 O
ATOM 11 C2' G A1708 -0.827 -19.081 -22.185 1.00 33.05 C
ATOM 12 O2' G A1708 -0.449 -18.699 -20.880 1.00 33.05 O
ATOM 13 C1' G A1708 -2.169 -19.787 -22.217 1.00 33.05 C
ATOM 14 N9 G A1708 -2.148 -21.157 -21.697 1.00 33.25 N
ATOM 15 C8 G A1708 -1.109 -22.046 -21.737 1.00 33.25 C
ATOM 16 N7 G A1708 -1.366 -23.181 -21.154 1.00 33.25 N
ATOM 17 C5 G A1708 -2.661 -23.033 -20.687 1.00 33.25 C
ATOM 18 C6 G A1708 -3.491 -23.949 -19.969 1.00 33.25 C
ATOM 19 O6 G A1708 -3.217 -25.101 -19.601 1.00 33.25 O
ATOM 20 N1 G A1708 -4.753 -23.412 -19.674 1.00 33.25 N
ATOM 21 C2 G A1708 -5.167 -22.137 -20.022 1.00 33.25 C
ATOM 22 N2 G A1708 -6.421 -21.800 -19.634 1.00 33.25 N
ATOM 23 N3 G A1708 -4.384 -21.273 -20.689 1.00 33.25 N
ATOM 24 C4 G A1708 -3.155 -21.780 -20.992 1.00 33.25 C
ATOM 25 P U A1709 -1.299 -15.744 -21.683 1.00 27.54 P
ATOM 26 OP1 U A1709 0.048 -15.474 -22.278 1.00 27.54 O
ATOM 27 OP2 U A1709 -1.385 -16.084 -20.233 1.00 27.54 O
ATOM 28 O5' U A1709 -2.280 -14.548 -22.004 1.00 27.54 O
TER
ATOM 1 O3' G B1708 -1.952 -16.968 -22.508 1.00 33.05 O
ATOM 2 P U B1709 -1.299 -15.744 -21.683 1.00 27.54 P
ATOM 3 OP1 U B1709 0.048 -15.474 -22.278 1.00 27.54 O
ATOM 4 OP2 U B1709 -1.385 -16.084 -20.233 1.00 27.54 O
ATOM 5 O5' U B1709 -2.280 -14.548 -22.004 1.00 27.54 O
ATOM 6 C5' U B1709 -2.517 -14.142 -23.329 1.00 27.54 C
ATOM 7 C4' U B1709 -3.830 -13.443 -23.424 1.00 27.54 C
ATOM 8 O4' U B1709 -4.864 -14.392 -23.742 1.00 27.54 O
ATOM 9 C3' U B1709 -4.291 -12.796 -22.142 1.00 27.54 C
ATOM 10 O3' U B1709 -3.720 -11.521 -21.957 1.00 27.54 O
ATOM 11 C2' U B1709 -5.800 -12.777 -22.283 1.00 27.54 C
ATOM 12 O2' U B1709 -6.232 -11.653 -23.025 1.00 27.54 O
ATOM 13 C1' U B1709 -6.057 -14.037 -23.101 1.00 27.54 C
ATOM 14 N1 U B1709 -6.467 -15.151 -22.261 1.00 28.28 N
ATOM 15 C2 U B1709 -7.712 -15.048 -21.670 1.00 28.28 C
ATOM 16 O2 U B1709 -8.465 -14.099 -21.806 1.00 28.28 O
ATOM 17 N3 U B1709 -8.050 -16.103 -20.896 1.00 28.28 N
ATOM 18 C4 U B1709 -7.286 -17.215 -20.666 1.00 28.28 C
ATOM 19 O4 U B1709 -7.756 -18.075 -19.934 1.00 28.28 O
ATOM 20 C5 U B1709 -6.003 -17.260 -21.308 1.00 28.28 C
ATOM 21 C6 U B1709 -5.639 -16.232 -22.078 1.00 28.28 C
ATOM 22 P A B1710 -3.252 -11.056 -20.497 1.00 15.96 P
ATOM 23 OP1 A B1710 -2.317 -9.909 -20.675 1.00 15.96 O
ATOM 24 OP2 A B1710 -2.767 -12.270 -19.781 1.00 15.96 O
ATOM 25 O5' A B1710 -4.611 -10.547 -19.854 1.00 15.96 O
TER
ATOM 2 P G A1708 -0.792 -21.705 -25.792 1.00 33.05 P
ATOM 3 OP1 G A1708 0.267 -21.550 -24.752 1.00 33.05 O
ATOM 4 OP2 G A1708 -1.794 -22.791 -25.649 1.00 33.05 O
ATOM 5 O5' G A1708 -1.546 -20.312 -26.001 1.00 33.05 O
ATOM 6 C5' G A1708 -1.056 -19.112 -25.405 1.00 33.05 C
ATOM 7 C4' G A1708 -1.900 -18.650 -24.241 1.00 33.05 C
ATOM 8 O4' G A1708 -2.524 -19.799 -23.589 1.00 33.05 O
ATOM 9 C3' G A1708 -1.114 -17.937 -23.145 1.00 33.05 C
ATOM 10 O3' G A1708 -1.952 -16.968 -22.508 1.00 33.05 O
ATOM 11 C2' G A1708 -0.827 -19.081 -22.185 1.00 33.05 C
ATOM 12 O2' G A1708 -0.449 -18.699 -20.880 1.00 33.05 O
ATOM 13 C1' G A1708 -2.169 -19.787 -22.217 1.00 33.05 C
ATOM 14 N9 G A1708 -2.148 -21.157 -21.697 1.00 33.25 N
ATOM 15 C8 G A1708 -1.109 -22.046 -21.737 1.00 33.25 C
ATOM 16 N7 G A1708 -1.366 -23.181 -21.154 1.00 33.25 N
ATOM 17 C5 G A1708 -2.661 -23.033 -20.687 1.00 33.25 C
ATOM 18 C6 G A1708 -3.491 -23.949 -19.969 1.00 33.25 C
ATOM 19 O6 G A1708 -3.217 -25.101 -19.601 1.00 33.25 O
ATOM 20 N1 G A1708 -4.753 -23.412 -19.674 1.00 33.25 N
ATOM 21 C2 G A1708 -5.167 -22.137 -20.022 1.00 33.25 C
ATOM 22 N2 G A1708 -6.421 -21.800 -19.634 1.00 33.25 N
ATOM 23 N3 G A1708 -4.384 -21.273 -20.689 1.00 33.25 N
ATOM 24 C4 G A1708 -3.155 -21.780 -20.992 1.00 33.25 C
ATOM 25 P U A1709 -1.299 -15.744 -21.683 1.00 27.54 P
ATOM 26 OP1 U A1709 0.048 -15.474 -22.278 1.00 27.54 O
ATOM 27 OP2 U A1709 -1.385 -16.084 -20.233 1.00 27.54 O
ATOM 28 O5' U A1709 -2.280 -14.548 -22.004 1.00 27.54 O
TER
ATOM 1 O3' G B1708 -1.952 -16.968 -22.508 1.00 33.05 O
ATOM 2 P U B1709 -1.299 -15.744 -21.683 1.00 27.54 P
ATOM 3 OP1 U B1709 0.048 -15.474 -22.278 1.00 27.54 O
ATOM 4 OP2 U B1709 -1.385 -16.084 -20.233 1.00 27.54 O
ATOM 5 O5' U B1709 -2.280 -14.548 -22.004 1.00 27.54 O
ATOM 6 C5' U B1709 -2.517 -14.142 -23.329 1.00 27.54 C
ATOM 7 C4' U B1709 -3.830 -13.443 -23.424 1.00 27.54 C
ATOM 8 O4' U B1709 -4.864 -14.392 -23.742 1.00 27.54 O
ATOM 9 C3' U B1709 -4.291 -12.796 -22.142 1.00 27.54 C
ATOM 10 O3' U B1709 -3.720 -11.521 -21.957 1.00 27.54 O
ATOM 11 C2' U B1709 -5.800 -12.777 -22.283 1.00 27.54 C
ATOM 12 O2' U B1709 -6.232 -11.653 -23.025 1.00 27.54 O
ATOM 13 C1' U B1709 -6.057 -14.037 -23.101 1.00 27.54 C
ATOM 14 N1 U B1709 -6.467 -15.151 -22.261 1.00 28.28 N
ATOM 15 C2 U B1709 -7.712 -15.048 -21.670 1.00 28.28 C
ATOM 16 O2 U B1709 -8.465 -14.099 -21.806 1.00 28.28 O
ATOM 17 N3 U B1709 -8.050 -16.103 -20.896 1.00 28.28 N
ATOM 18 C4 U B1709 -7.286 -17.215 -20.666 1.00 28.28 C
ATOM 19 O4 U B1709 -7.756 -18.075 -19.934 1.00 28.28 O
ATOM 20 C5 U B1709 -6.003 -17.260 -21.308 1.00 28.28 C
ATOM 21 C6 U B1709 -5.639 -16.232 -22.078 1.00 28.28 C
ATOM 22 P A B1710 -3.252 -11.056 -20.497 1.00 15.96 P
ATOM 23 OP1 A B1710 -2.317 -9.909 -20.675 1.00 15.96 O
ATOM 24 OP2 A B1710 -2.767 -12.270 -19.781 1.00 15.96 O
ATOM 25 O5' A B1710 -4.611 -10.547 -19.854 1.00 15.96 O
TER
Atoms:
OP1: (0.267,-21.550,-24.752)
OP2: (-1.794,-22.791,-25.649)
C3': (-1.114,-17.937,-23.145)
C1': (-2.169,-19.787,-22.217)
C5': (-1.056,-19.112,-25.405)
O6: (-3.217,-25.101,-19.601)
O4': (-2.524,-19.799,-23.589)
C8: (-1.109,-22.046,-21.737)
C2: (-5.167,-22.137,-20.022)
C6: (-3.491,-23.949,-19.969)
C5: (-2.661,-23.033,-20.687)
C4: (-3.155,-21.780,-20.992)
P: (-0.792,-21.705,-25.792)
C4': (-1.900,-18.650,-24.241)
C2': (-0.827,-19.081,-22.185)
O2': (-0.449,-18.699,-20.880)
N1: (-4.753,-23.412,-19.674)
N2: (-6.421,-21.800,-19.634)
N3: (-4.384,-21.273,-20.689)
N7: (-1.366,-23.181,-21.154)
N9: (-2.148,-21.157,-21.697)
O5': (-1.546,-20.312,-26.001)
O3': (-1.952,-16.968,-22.508)
OP2: (-1.794,-22.791,-25.649)
C3': (-1.114,-17.937,-23.145)
C1': (-2.169,-19.787,-22.217)
C5': (-1.056,-19.112,-25.405)
O6: (-3.217,-25.101,-19.601)
O4': (-2.524,-19.799,-23.589)
C8: (-1.109,-22.046,-21.737)
C2: (-5.167,-22.137,-20.022)
C6: (-3.491,-23.949,-19.969)
C5: (-2.661,-23.033,-20.687)
C4: (-3.155,-21.780,-20.992)
P: (-0.792,-21.705,-25.792)
C4': (-1.900,-18.650,-24.241)
C2': (-0.827,-19.081,-22.185)
O2': (-0.449,-18.699,-20.880)
N1: (-4.753,-23.412,-19.674)
N2: (-6.421,-21.800,-19.634)
N3: (-4.384,-21.273,-20.689)
N7: (-1.366,-23.181,-21.154)
N9: (-2.148,-21.157,-21.697)
O5': (-1.546,-20.312,-26.001)
O3': (-1.952,-16.968,-22.508)
C4: (-7.286,-17.215,-20.666)
N3: (-8.050,-16.103,-20.896)
OP1: (0.048,-15.474,-22.278)
OP2: (-1.385,-16.084,-20.233)
C2: (-7.712,-15.048,-21.670)
C1': (-6.057,-14.037,-23.101)
C3': (-4.291,-12.796,-22.142)
O5': (-2.280,-14.548,-22.004)
O4': (-4.864,-14.392,-23.742)
C5': (-2.517,-14.142,-23.329)
P: (-1.299,-15.744,-21.683)
C4': (-3.830,-13.443,-23.424)
C2': (-5.800,-12.777,-22.283)
O2': (-6.232,-11.653,-23.025)
N1: (-6.467,-15.151,-22.261)
O4: (-7.756,-18.075,-19.934)
O2: (-8.465,-14.099,-21.806)
C6: (-5.639,-16.232,-22.078)
C5: (-6.003,-17.260,-21.308)
O3': (-3.720,-11.521,-21.957)
N3: (-8.050,-16.103,-20.896)
OP1: (0.048,-15.474,-22.278)
OP2: (-1.385,-16.084,-20.233)
C2: (-7.712,-15.048,-21.670)
C1': (-6.057,-14.037,-23.101)
C3': (-4.291,-12.796,-22.142)
O5': (-2.280,-14.548,-22.004)
O4': (-4.864,-14.392,-23.742)
C5': (-2.517,-14.142,-23.329)
P: (-1.299,-15.744,-21.683)
C4': (-3.830,-13.443,-23.424)
C2': (-5.800,-12.777,-22.283)
O2': (-6.232,-11.653,-23.025)
N1: (-6.467,-15.151,-22.261)
O4: (-7.756,-18.075,-19.934)
O2: (-8.465,-14.099,-21.806)
C6: (-5.639,-16.232,-22.078)
C5: (-6.003,-17.260,-21.308)
O3': (-3.720,-11.521,-21.957)
Image (generated by PyMOL):