Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:977:978
Extra
PDB:
ATOM 1 O3' A A 76 39.387 62.103 125.221 1.00 62.45 O
ATOM 2 P G A 77 37.958 61.746 125.833 1.00 62.56 P
ATOM 3 OP1 G A 77 37.718 62.722 126.924 1.00 60.20 O
ATOM 4 OP2 G A 77 37.934 60.288 126.125 1.00 63.56 O
ATOM 5 O5' G A 77 36.967 62.035 124.621 1.00 62.34 O
ATOM 6 C5' G A 77 36.691 63.385 124.202 1.00 60.13 C
ATOM 7 C4' G A 77 37.806 63.898 123.319 1.00 58.60 C
ATOM 8 O4' G A 77 37.922 63.081 122.114 1.00 56.65 O
ATOM 9 C3' G A 77 37.643 65.333 122.829 1.00 57.51 C
ATOM 10 O3' G A 77 38.946 65.892 122.712 1.00 57.25 O
ATOM 11 C2' G A 77 37.032 65.135 121.450 1.00 56.30 C
ATOM 12 O2' G A 77 37.203 66.239 120.588 1.00 56.57 O
ATOM 13 C1' G A 77 37.822 63.918 120.977 1.00 55.26 C
ATOM 14 N9 G A 77 37.228 63.162 119.880 1.00 52.75 N
ATOM 15 C8 G A 77 35.892 63.003 119.598 1.00 51.23 C
ATOM 16 N7 G A 77 35.677 62.260 118.548 1.00 50.74 N
ATOM 17 C5 G A 77 36.946 61.905 118.112 1.00 50.58 C
ATOM 18 C6 G A 77 37.346 61.093 117.024 1.00 50.44 C
ATOM 19 O6 G A 77 36.633 60.500 116.202 1.00 50.53 O
ATOM 20 N1 G A 77 38.733 60.996 116.940 1.00 50.85 N
ATOM 21 C2 G A 77 39.622 61.598 117.795 1.00 51.01 C
ATOM 22 N2 G A 77 40.924 61.382 117.542 1.00 48.98 N
ATOM 23 N3 G A 77 39.261 62.355 118.820 1.00 50.92 N
ATOM 24 C4 G A 77 37.915 62.461 118.918 1.00 51.73 C
ATOM 25 P U A 78 39.129 67.436 122.328 1.00 57.52 P
ATOM 26 OP1 U A 78 38.112 68.240 123.059 1.00 55.93 O
ATOM 27 OP2 U A 78 39.203 67.525 120.847 1.00 57.84 O
ATOM 28 O5' U A 78 40.577 67.772 122.896 1.00 55.70 O
TER
ATOM 1 O3' G B 77 38.946 65.892 122.712 1.00 57.25 O
ATOM 2 P U B 78 39.129 67.436 122.328 1.00 57.52 P
ATOM 3 OP1 U B 78 38.112 68.240 123.059 1.00 55.93 O
ATOM 4 OP2 U B 78 39.203 67.525 120.847 1.00 57.84 O
ATOM 5 O5' U B 78 40.577 67.772 122.896 1.00 55.70 O
ATOM 6 C5' U B 78 40.820 67.872 124.306 1.00 53.63 C
ATOM 7 C4' U B 78 42.194 67.346 124.629 1.00 52.68 C
ATOM 8 O4' U B 78 42.214 65.915 124.418 1.00 53.33 O
ATOM 9 C3' U B 78 43.309 67.868 123.743 1.00 52.23 C
ATOM 10 O3' U B 78 43.768 69.136 124.194 1.00 53.74 O
ATOM 11 C2' U B 78 44.360 66.773 123.867 1.00 50.98 C
ATOM 12 O2' U B 78 45.108 66.849 125.061 1.00 48.64 O
ATOM 13 C1' U B 78 43.483 65.521 123.926 1.00 50.83 C
ATOM 14 N1 U B 78 43.288 64.831 122.643 1.00 50.56 N
ATOM 15 C2 U B 78 44.411 64.396 121.963 1.00 50.99 C
ATOM 16 O2 U B 78 45.548 64.593 122.360 1.00 52.36 O
ATOM 17 N3 U B 78 44.157 63.721 120.798 1.00 50.48 N
ATOM 18 C4 U B 78 42.927 63.443 120.248 1.00 51.43 C
ATOM 19 O4 U B 78 42.865 62.763 119.222 1.00 51.64 O
ATOM 20 C5 U B 78 41.813 63.943 120.995 1.00 51.63 C
ATOM 21 C6 U B 78 42.026 64.605 122.136 1.00 50.84 C
ATOM 22 P A B 79 43.972 70.332 123.140 1.00 54.55 P
ATOM 23 OP1 A B 79 44.508 71.493 123.895 1.00 54.20 O
ATOM 24 OP2 A B 79 42.717 70.487 122.363 1.00 54.60 O
ATOM 25 O5' A B 79 45.123 69.794 122.175 1.00 52.15 O
TER
ATOM 2 P G A 77 37.958 61.746 125.833 1.00 62.56 P
ATOM 3 OP1 G A 77 37.718 62.722 126.924 1.00 60.20 O
ATOM 4 OP2 G A 77 37.934 60.288 126.125 1.00 63.56 O
ATOM 5 O5' G A 77 36.967 62.035 124.621 1.00 62.34 O
ATOM 6 C5' G A 77 36.691 63.385 124.202 1.00 60.13 C
ATOM 7 C4' G A 77 37.806 63.898 123.319 1.00 58.60 C
ATOM 8 O4' G A 77 37.922 63.081 122.114 1.00 56.65 O
ATOM 9 C3' G A 77 37.643 65.333 122.829 1.00 57.51 C
ATOM 10 O3' G A 77 38.946 65.892 122.712 1.00 57.25 O
ATOM 11 C2' G A 77 37.032 65.135 121.450 1.00 56.30 C
ATOM 12 O2' G A 77 37.203 66.239 120.588 1.00 56.57 O
ATOM 13 C1' G A 77 37.822 63.918 120.977 1.00 55.26 C
ATOM 14 N9 G A 77 37.228 63.162 119.880 1.00 52.75 N
ATOM 15 C8 G A 77 35.892 63.003 119.598 1.00 51.23 C
ATOM 16 N7 G A 77 35.677 62.260 118.548 1.00 50.74 N
ATOM 17 C5 G A 77 36.946 61.905 118.112 1.00 50.58 C
ATOM 18 C6 G A 77 37.346 61.093 117.024 1.00 50.44 C
ATOM 19 O6 G A 77 36.633 60.500 116.202 1.00 50.53 O
ATOM 20 N1 G A 77 38.733 60.996 116.940 1.00 50.85 N
ATOM 21 C2 G A 77 39.622 61.598 117.795 1.00 51.01 C
ATOM 22 N2 G A 77 40.924 61.382 117.542 1.00 48.98 N
ATOM 23 N3 G A 77 39.261 62.355 118.820 1.00 50.92 N
ATOM 24 C4 G A 77 37.915 62.461 118.918 1.00 51.73 C
ATOM 25 P U A 78 39.129 67.436 122.328 1.00 57.52 P
ATOM 26 OP1 U A 78 38.112 68.240 123.059 1.00 55.93 O
ATOM 27 OP2 U A 78 39.203 67.525 120.847 1.00 57.84 O
ATOM 28 O5' U A 78 40.577 67.772 122.896 1.00 55.70 O
TER
ATOM 1 O3' G B 77 38.946 65.892 122.712 1.00 57.25 O
ATOM 2 P U B 78 39.129 67.436 122.328 1.00 57.52 P
ATOM 3 OP1 U B 78 38.112 68.240 123.059 1.00 55.93 O
ATOM 4 OP2 U B 78 39.203 67.525 120.847 1.00 57.84 O
ATOM 5 O5' U B 78 40.577 67.772 122.896 1.00 55.70 O
ATOM 6 C5' U B 78 40.820 67.872 124.306 1.00 53.63 C
ATOM 7 C4' U B 78 42.194 67.346 124.629 1.00 52.68 C
ATOM 8 O4' U B 78 42.214 65.915 124.418 1.00 53.33 O
ATOM 9 C3' U B 78 43.309 67.868 123.743 1.00 52.23 C
ATOM 10 O3' U B 78 43.768 69.136 124.194 1.00 53.74 O
ATOM 11 C2' U B 78 44.360 66.773 123.867 1.00 50.98 C
ATOM 12 O2' U B 78 45.108 66.849 125.061 1.00 48.64 O
ATOM 13 C1' U B 78 43.483 65.521 123.926 1.00 50.83 C
ATOM 14 N1 U B 78 43.288 64.831 122.643 1.00 50.56 N
ATOM 15 C2 U B 78 44.411 64.396 121.963 1.00 50.99 C
ATOM 16 O2 U B 78 45.548 64.593 122.360 1.00 52.36 O
ATOM 17 N3 U B 78 44.157 63.721 120.798 1.00 50.48 N
ATOM 18 C4 U B 78 42.927 63.443 120.248 1.00 51.43 C
ATOM 19 O4 U B 78 42.865 62.763 119.222 1.00 51.64 O
ATOM 20 C5 U B 78 41.813 63.943 120.995 1.00 51.63 C
ATOM 21 C6 U B 78 42.026 64.605 122.136 1.00 50.84 C
ATOM 22 P A B 79 43.972 70.332 123.140 1.00 54.55 P
ATOM 23 OP1 A B 79 44.508 71.493 123.895 1.00 54.20 O
ATOM 24 OP2 A B 79 42.717 70.487 122.363 1.00 54.60 O
ATOM 25 O5' A B 79 45.123 69.794 122.175 1.00 52.15 O
TER
Atoms:
OP1: (37.718,62.722,126.924)
OP2: (37.934,60.288,126.125)
C3': (37.643,65.333,122.829)
C1': (37.822,63.918,120.977)
C5': (36.691,63.385,124.202)
O6: (36.633,60.500,116.202)
O4': (37.922,63.081,122.114)
C8: (35.892,63.003,119.598)
C2: (39.622,61.598,117.795)
C6: (37.346,61.093,117.024)
C5: (36.946,61.905,118.112)
C4: (37.915,62.461,118.918)
P: (37.958,61.746,125.833)
C4': (37.806,63.898,123.319)
C2': (37.032,65.135,121.450)
O2': (37.203,66.239,120.588)
N1: (38.733,60.996,116.940)
N2: (40.924,61.382,117.542)
N3: (39.261,62.355,118.820)
N7: (35.677,62.260,118.548)
N9: (37.228,63.162,119.880)
O5': (36.967,62.035,124.621)
O3': (38.946,65.892,122.712)
OP2: (37.934,60.288,126.125)
C3': (37.643,65.333,122.829)
C1': (37.822,63.918,120.977)
C5': (36.691,63.385,124.202)
O6: (36.633,60.500,116.202)
O4': (37.922,63.081,122.114)
C8: (35.892,63.003,119.598)
C2: (39.622,61.598,117.795)
C6: (37.346,61.093,117.024)
C5: (36.946,61.905,118.112)
C4: (37.915,62.461,118.918)
P: (37.958,61.746,125.833)
C4': (37.806,63.898,123.319)
C2': (37.032,65.135,121.450)
O2': (37.203,66.239,120.588)
N1: (38.733,60.996,116.940)
N2: (40.924,61.382,117.542)
N3: (39.261,62.355,118.820)
N7: (35.677,62.260,118.548)
N9: (37.228,63.162,119.880)
O5': (36.967,62.035,124.621)
O3': (38.946,65.892,122.712)
C4: (42.927,63.443,120.248)
N3: (44.157,63.721,120.798)
OP1: (38.112,68.240,123.059)
OP2: (39.203,67.525,120.847)
C2: (44.411,64.396,121.963)
C1': (43.483,65.521,123.926)
C3': (43.309,67.868,123.743)
O5': (40.577,67.772,122.896)
O4': (42.214,65.915,124.418)
C5': (40.820,67.872,124.306)
P: (39.129,67.436,122.328)
C4': (42.194,67.346,124.629)
C2': (44.360,66.773,123.867)
O2': (45.108,66.849,125.061)
N1: (43.288,64.831,122.643)
O4: (42.865,62.763,119.222)
O2: (45.548,64.593,122.360)
C6: (42.026,64.605,122.136)
C5: (41.813,63.943,120.995)
O3': (43.768,69.136,124.194)
N3: (44.157,63.721,120.798)
OP1: (38.112,68.240,123.059)
OP2: (39.203,67.525,120.847)
C2: (44.411,64.396,121.963)
C1': (43.483,65.521,123.926)
C3': (43.309,67.868,123.743)
O5': (40.577,67.772,122.896)
O4': (42.214,65.915,124.418)
C5': (40.820,67.872,124.306)
P: (39.129,67.436,122.328)
C4': (42.194,67.346,124.629)
C2': (44.360,66.773,123.867)
O2': (45.108,66.849,125.061)
N1: (43.288,64.831,122.643)
O4: (42.865,62.763,119.222)
O2: (45.548,64.593,122.360)
C6: (42.026,64.605,122.136)
C5: (41.813,63.943,120.995)
O3': (43.768,69.136,124.194)
Image (generated by PyMOL):