ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01078:01079

Extra

PDB:
ATOM 1 O3' A A1077 40.176 106.359 139.607 1.00 46.00 O
ATOM 2 P G A1078 39.519 107.801 139.383 1.00 47.91 P
ATOM 3 OP1 G A1078 40.622 108.783 139.184 1.00 49.49 O
ATOM 4 OP2 G A1078 38.508 108.047 140.441 1.00 48.88 O
ATOM 5 O5' G A1078 38.768 107.621 137.995 1.00 47.70 O
ATOM 6 C5' G A1078 37.337 107.645 137.902 1.00 45.92 C
ATOM 7 C4' G A1078 36.927 107.154 136.545 1.00 44.06 C
ATOM 8 O4' G A1078 35.483 107.092 136.443 1.00 43.52 O
ATOM 9 C3' G A1078 37.397 108.046 135.401 1.00 44.46 C
ATOM 10 O3' G A1078 37.698 107.220 134.292 1.00 44.54 O
ATOM 11 C2' G A1078 36.171 108.906 135.124 1.00 44.84 C
ATOM 12 O2' G A1078 36.109 109.426 133.813 1.00 45.93 O
ATOM 13 C1' G A1078 35.063 107.886 135.354 1.00 43.70 C
ATOM 14 N9 G A1078 33.732 108.415 135.630 1.00 40.07 N
ATOM 15 C8 G A1078 33.356 109.699 135.939 1.00 37.65 C
ATOM 16 N7 G A1078 32.062 109.839 136.037 1.00 38.84 N
ATOM 17 C5 G A1078 31.566 108.565 135.798 1.00 37.59 C
ATOM 18 C6 G A1078 30.231 108.086 135.740 1.00 37.53 C
ATOM 19 O6 G A1078 29.178 108.719 135.875 1.00 37.04 O
ATOM 20 N1 G A1078 30.194 106.722 135.479 1.00 34.00 N
ATOM 21 C2 G A1078 31.301 105.934 135.280 1.00 37.77 C
ATOM 22 N2 G A1078 31.101 104.645 135.040 1.00 35.05 N
ATOM 23 N3 G A1078 32.532 106.374 135.311 1.00 36.82 N
ATOM 24 C4 G A1078 32.591 107.681 135.572 1.00 37.52 C
ATOM 25 P U A1079 39.209 106.748 134.053 1.00 44.60 P
ATOM 26 OP1 U A1079 40.101 107.639 134.850 1.00 47.56 O
ATOM 27 OP2 U A1079 39.426 106.600 132.589 1.00 47.90 O
ATOM 28 O5' U A1079 39.265 105.301 134.688 1.00 42.74 O
TER

ATOM 1 O3' G B1078 37.698 107.220 134.292 1.00 44.54 O
ATOM 2 P U B1079 39.209 106.748 134.053 1.00 44.60 P
ATOM 3 OP1 U B1079 40.101 107.639 134.850 1.00 47.56 O
ATOM 4 OP2 U B1079 39.426 106.600 132.589 1.00 47.90 O
ATOM 5 O5' U B1079 39.265 105.301 134.688 1.00 42.74 O
ATOM 6 C5' U B1079 38.869 104.206 133.907 1.00 44.04 C
ATOM 7 C4' U B1079 39.395 102.930 134.474 1.00 43.83 C
ATOM 8 O4' U B1079 38.748 102.621 135.737 1.00 44.59 O
ATOM 9 C3' U B1079 39.029 101.816 133.524 1.00 44.58 C
ATOM 10 O3' U B1079 40.126 101.612 132.634 1.00 45.67 O
ATOM 11 C2' U B1079 38.678 100.652 134.440 1.00 42.84 C
ATOM 12 O2' U B1079 39.815 99.937 134.852 1.00 46.08 O
ATOM 13 C1' U B1079 38.062 101.390 135.634 1.00 42.48 C
ATOM 14 N1 U B1079 36.628 101.690 135.507 1.00 42.99 N
ATOM 15 C2 U B1079 35.740 100.631 135.492 1.00 42.85 C
ATOM 16 O2 U B1079 36.095 99.469 135.596 1.00 43.95 O
ATOM 17 N3 U B1079 34.420 100.985 135.350 1.00 41.93 N
ATOM 18 C4 U B1079 33.911 102.262 135.232 1.00 43.03 C
ATOM 19 O4 U B1079 32.699 102.423 135.109 1.00 44.36 O
ATOM 20 C5 U B1079 34.891 103.301 135.268 1.00 42.64 C
ATOM 21 C6 U B1079 36.178 102.990 135.401 1.00 41.48 C
ATOM 22 P G B1080 40.029 102.126 131.111 1.00 45.01 P
ATOM 23 OP1 G B1080 40.997 101.312 130.336 1.00 45.83 O
ATOM 24 OP2 G B1080 40.095 103.615 131.062 1.00 40.69 O
ATOM 25 O5' G B1080 38.581 101.667 130.650 1.00 42.98 O
TER

Atoms:
OP1: (40.622,108.783,139.184)
OP2: (38.508,108.047,140.441)
C3': (37.397,108.046,135.401)
C1': (35.063,107.886,135.354)
C5': (37.337,107.645,137.902)
O6: (29.178,108.719,135.875)
O4': (35.483,107.092,136.443)
C8: (33.356,109.699,135.939)
C2: (31.301,105.934,135.280)
C6: (30.231,108.086,135.740)
C5: (31.566,108.565,135.798)
C4: (32.591,107.681,135.572)
P: (39.519,107.801,139.383)
C4': (36.927,107.154,136.545)
C2': (36.171,108.906,135.124)
O2': (36.109,109.426,133.813)
N1: (30.194,106.722,135.479)
N2: (31.101,104.645,135.040)
N3: (32.532,106.374,135.311)
N7: (32.062,109.839,136.037)
N9: (33.732,108.415,135.630)
O5': (38.768,107.621,137.995)
O3': (37.698,107.220,134.292)
C4: (33.911,102.262,135.232)
N3: (34.420,100.985,135.350)
OP1: (40.101,107.639,134.850)
OP2: (39.426,106.600,132.589)
C2: (35.740,100.631,135.492)
C1': (38.062,101.390,135.634)
C3': (39.029,101.816,133.524)
O5': (39.265,105.301,134.688)
O4': (38.748,102.621,135.737)
C5': (38.869,104.206,133.907)
P: (39.209,106.748,134.053)
C4': (39.395,102.930,134.474)
C2': (38.678,100.652,134.440)
O2': (39.815,99.937,134.852)
N1: (36.628,101.690,135.507)
O4: (32.699,102.423,135.109)
O2: (36.095,99.469,135.596)
C6: (36.178,102.990,135.401)
C5: (34.891,103.301,135.268)
O3': (40.126,101.612,132.634)
Image (generated by PyMOL):
PyMOL image
show in jmol