ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A597:A678

Extra

PDB:
ATOM 1 O3' C A 596 -30.346 160.746 192.574 1.00 22.59 O
ATOM 2 P U A 597 -30.781 162.149 191.885 1.00 38.44 P
ATOM 3 OP1 U A 597 -31.642 162.883 192.854 1.00 50.24 O
ATOM 4 OP2 U A 597 -31.260 161.941 190.507 1.00 50.24 O
ATOM 5 O5' U A 597 -29.419 162.958 191.717 1.00 11.87 O
ATOM 6 C5' U A 597 -28.288 162.716 192.571 1.00 11.87 C
ATOM 7 C4' U A 597 -27.044 163.308 191.949 1.00 11.87 C
ATOM 8 O4' U A 597 -26.711 162.539 190.764 1.00 11.87 O
ATOM 9 C3' U A 597 -27.226 164.737 191.462 1.00 11.87 C
ATOM 10 O3' U A 597 -26.962 165.695 192.492 1.00 11.87 O
ATOM 11 C2' U A 597 -26.268 164.818 190.282 1.00 11.87 C
ATOM 12 O2' U A 597 -24.937 165.072 190.676 1.00 11.87 O
ATOM 13 C1' U A 597 -26.378 163.405 189.695 1.00 11.87 C
ATOM 14 N1 U A 597 -27.437 163.281 188.675 1.00 5.14 N
ATOM 15 C2 U A 597 -27.191 163.765 187.407 1.00 5.14 C
ATOM 16 O2 U A 597 -26.138 164.235 187.083 1.00 5.14 O
ATOM 17 N3 U A 597 -28.231 163.682 186.533 1.00 5.14 N
ATOM 18 C4 U A 597 -29.469 163.171 186.790 1.00 5.14 C
ATOM 19 O4 U A 597 -30.373 163.319 185.956 1.00 5.14 O
ATOM 20 C5 U A 597 -29.631 162.647 188.110 1.00 5.14 C
ATOM 21 C6 U A 597 -28.639 162.723 188.980 1.00 5.14 C
ATOM 22 P C A 598 -27.942 166.969 192.671 1.00 31.70 P
ATOM 23 OP1 C A 598 -27.767 167.426 194.066 1.00 49.13 O
ATOM 24 OP2 C A 598 -29.309 166.663 192.162 1.00 49.13 O
ATOM 25 O5' C A 598 -27.324 168.069 191.710 1.00 10.45 O
TER

ATOM 1 O3' G B 677 -27.395 160.444 178.345 1.00 27.89 O
ATOM 2 P A B 678 -28.881 160.008 177.921 1.00 34.67 P
ATOM 3 OP1 A B 678 -28.767 158.799 177.062 1.00 40.74 O
ATOM 4 OP2 A B 678 -29.609 161.207 177.407 1.00 40.74 O
ATOM 5 O5' A B 678 -29.520 159.563 179.312 1.00 34.70 O
ATOM 6 C5' A B 678 -30.366 160.458 180.069 1.00 34.70 C
ATOM 7 C4' A B 678 -29.780 160.709 181.433 1.00 34.70 C
ATOM 8 O4' A B 678 -28.475 161.276 181.225 1.00 34.70 O
ATOM 9 C3' A B 678 -30.529 161.751 182.257 1.00 34.70 C
ATOM 10 O3' A B 678 -31.524 161.276 183.189 1.00 34.70 O
ATOM 11 C2' A B 678 -29.435 162.352 183.120 1.00 34.70 C
ATOM 12 O2' A B 678 -29.225 161.608 184.294 1.00 34.70 O
ATOM 13 C1' A B 678 -28.195 162.166 182.265 1.00 34.70 C
ATOM 14 N9 A B 678 -27.583 163.376 181.742 1.00 33.91 N
ATOM 15 C8 A B 678 -27.576 163.912 180.488 1.00 33.91 C
ATOM 16 N7 A B 678 -26.784 164.946 180.365 1.00 33.91 N
ATOM 17 C5 A B 678 -26.260 165.111 181.633 1.00 33.91 C
ATOM 18 C6 A B 678 -25.327 166.001 182.157 1.00 33.91 C
ATOM 19 N6 A B 678 -24.670 166.905 181.428 1.00 33.91 N
ATOM 20 N1 A B 678 -25.063 165.922 183.475 1.00 33.91 N
ATOM 21 C2 A B 678 -25.682 164.982 184.197 1.00 33.91 C
ATOM 22 N3 A B 678 -26.547 164.065 183.810 1.00 33.91 N
ATOM 23 C4 A B 678 -26.790 164.186 182.500 1.00 33.91 C
ATOM 24 P C B 679 -31.764 159.692 183.456 1.00 17.96 P
ATOM 25 OP1 C B 679 -31.642 158.885 182.223 1.00 33.20 O
ATOM 26 OP2 C B 679 -33.022 159.625 184.248 1.00 33.20 O
ATOM 27 O5' C B 679 -30.602 159.222 184.443 1.00 0.79 O
TER

Atoms:
C4: (-29.469,163.171,186.790)
N3: (-28.231,163.682,186.533)
OP1: (-31.642,162.883,192.854)
OP2: (-31.260,161.941,190.507)
C2: (-27.191,163.765,187.407)
C1': (-26.378,163.405,189.695)
C3': (-27.226,164.737,191.462)
O5': (-29.419,162.958,191.717)
O4': (-26.711,162.539,190.764)
C5': (-28.288,162.716,192.571)
P: (-30.781,162.149,191.885)
C4': (-27.044,163.308,191.949)
C2': (-26.268,164.818,190.282)
O2': (-24.937,165.072,190.676)
N1: (-27.437,163.281,188.675)
O4: (-30.373,163.319,185.956)
O2: (-26.138,164.235,187.083)
C6: (-28.639,162.723,188.980)
C5: (-29.631,162.647,188.110)
O3': (-26.962,165.695,192.492)
OP1: (-28.767,158.799,177.062)
OP2: (-29.609,161.207,177.407)
C3': (-30.529,161.751,182.257)
C1': (-28.195,162.166,182.265)
C5': (-30.366,160.458,180.069)
O4': (-28.475,161.276,181.225)
C8: (-27.576,163.912,180.488)
O2': (-29.225,161.608,184.294)
C6: (-25.327,166.001,182.157)
C5: (-26.260,165.111,181.633)
C4: (-26.790,164.186,182.500)
P: (-28.881,160.008,177.921)
C4': (-29.780,160.709,181.433)
C2': (-29.435,162.352,183.120)
C2: (-25.682,164.982,184.197)
N1: (-25.063,165.922,183.475)
N3: (-26.547,164.065,183.810)
N6: (-24.670,166.905,181.428)
N7: (-26.784,164.946,180.365)
N9: (-27.583,163.376,181.742)
O5': (-29.520,159.563,179.312)
O3': (-31.524,161.276,183.189)
Image (generated by PyMOL):
PyMOL image
show in jmol