Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A513:A25
Extra
PDB:
ATOM 1 O3' A A 512 -32.262 143.467 207.483 1.00 0.01 O
ATOM 2 P A A 513 -32.237 141.862 207.389 1.00 0.01 P
ATOM 3 OP1 A A 513 -33.337 141.381 208.215 1.00 0.01 O
ATOM 4 OP2 A A 513 -30.861 141.396 207.699 1.00 0.01 O
ATOM 5 O5' A A 513 -32.583 141.604 205.868 1.00 0.01 O
ATOM 6 C5' A A 513 -33.870 141.931 205.377 1.00 0.01 C
ATOM 7 C4' A A 513 -33.962 141.765 203.887 1.00 0.01 C
ATOM 8 O4' A A 513 -33.097 142.703 203.219 1.00 0.01 O
ATOM 9 C3' A A 513 -33.517 140.435 203.325 1.00 0.01 C
ATOM 10 O3' A A 513 -34.465 139.426 203.517 1.00 0.01 O
ATOM 11 C2' A A 513 -33.337 140.789 201.878 1.00 0.01 C
ATOM 12 O2' A A 513 -34.604 140.984 201.271 1.00 0.01 O
ATOM 13 C1' A A 513 -32.661 142.140 202.006 1.00 0.01 C
ATOM 14 N9 A A 513 -31.209 142.014 202.065 1.00 0.01 N
ATOM 15 C8 A A 513 -30.445 142.099 203.188 1.00 0.01 C
ATOM 16 N7 A A 513 -29.169 141.968 202.939 1.00 0.01 N
ATOM 17 C5 A A 513 -29.107 141.796 201.574 1.00 0.01 C
ATOM 18 C6 A A 513 -28.039 141.594 200.728 1.00 0.01 C
ATOM 19 N6 A A 513 -26.786 141.544 201.144 1.00 0.01 N
ATOM 20 N1 A A 513 -28.303 141.429 199.427 1.00 0.01 N
ATOM 21 C2 A A 513 -29.565 141.489 199.016 1.00 0.01 C
ATOM 22 N3 A A 513 -30.661 141.676 199.733 1.00 0.01 N
ATOM 23 C4 A A 513 -30.355 141.818 201.020 1.00 0.01 C
ATOM 24 P A A 514 -34.010 137.995 204.005 1.00 0.01 P
ATOM 25 OP1 A A 514 -35.151 137.401 204.722 1.00 0.01 O
ATOM 26 OP2 A A 514 -32.737 138.179 204.711 1.00 0.01 O
ATOM 27 O5' A A 514 -33.791 137.237 202.642 1.00 0.01 O
TER
ATOM 1 O3' U B 24 -20.085 136.887 201.769 1.00 5.15 O
ATOM 2 P G B 25 -19.209 138.203 201.473 1.00 0.07 P
ATOM 3 OP1 G B 25 -18.206 137.816 200.455 1.00 0.07 O
ATOM 4 OP2 G B 25 -18.734 138.729 202.770 1.00 0.07 O
ATOM 5 O5' G B 25 -20.251 139.224 200.845 1.00 0.07 O
ATOM 6 C5' G B 25 -21.120 138.832 199.809 1.00 0.07 C
ATOM 7 C4' G B 25 -22.388 139.605 199.880 1.00 0.07 C
ATOM 8 O4' G B 25 -23.057 139.321 201.130 1.00 0.07 O
ATOM 9 C3' G B 25 -22.219 141.103 199.893 1.00 0.07 C
ATOM 10 O3' G B 25 -22.035 141.627 198.609 1.00 0.07 O
ATOM 11 C2' G B 25 -23.489 141.584 200.564 1.00 0.07 C
ATOM 12 O2' G B 25 -24.560 141.611 199.642 1.00 0.07 O
ATOM 13 C1' G B 25 -23.737 140.468 201.578 1.00 0.07 C
ATOM 14 N9 G B 25 -23.236 140.809 202.917 1.00 0.09 N
ATOM 15 C8 G B 25 -21.962 140.702 203.417 1.00 0.09 C
ATOM 16 N7 G B 25 -21.842 141.076 204.667 1.00 0.09 N
ATOM 17 C5 G B 25 -23.136 141.453 204.997 1.00 0.09 C
ATOM 18 C6 G B 25 -23.673 141.960 206.201 1.00 0.09 C
ATOM 19 O6 G B 25 -23.141 142.211 207.291 1.00 0.09 O
ATOM 20 N1 G B 25 -25.017 142.196 206.073 1.00 0.09 N
ATOM 21 C2 G B 25 -25.771 141.990 204.963 1.00 0.09 C
ATOM 22 N2 G B 25 -27.068 142.289 205.092 1.00 0.09 N
ATOM 23 N3 G B 25 -25.300 141.531 203.838 1.00 0.09 N
ATOM 24 C4 G B 25 -23.992 141.289 203.933 1.00 0.09 C
ATOM 25 P G B 26 -20.924 142.726 198.369 1.00 0.01 P
ATOM 26 OP1 G B 26 -20.598 142.715 196.946 1.00 0.01 O
ATOM 27 OP2 G B 26 -19.854 142.466 199.332 1.00 0.01 O
ATOM 28 O5' G B 26 -21.698 144.060 198.734 1.00 0.01 O
TER
ATOM 2 P A A 513 -32.237 141.862 207.389 1.00 0.01 P
ATOM 3 OP1 A A 513 -33.337 141.381 208.215 1.00 0.01 O
ATOM 4 OP2 A A 513 -30.861 141.396 207.699 1.00 0.01 O
ATOM 5 O5' A A 513 -32.583 141.604 205.868 1.00 0.01 O
ATOM 6 C5' A A 513 -33.870 141.931 205.377 1.00 0.01 C
ATOM 7 C4' A A 513 -33.962 141.765 203.887 1.00 0.01 C
ATOM 8 O4' A A 513 -33.097 142.703 203.219 1.00 0.01 O
ATOM 9 C3' A A 513 -33.517 140.435 203.325 1.00 0.01 C
ATOM 10 O3' A A 513 -34.465 139.426 203.517 1.00 0.01 O
ATOM 11 C2' A A 513 -33.337 140.789 201.878 1.00 0.01 C
ATOM 12 O2' A A 513 -34.604 140.984 201.271 1.00 0.01 O
ATOM 13 C1' A A 513 -32.661 142.140 202.006 1.00 0.01 C
ATOM 14 N9 A A 513 -31.209 142.014 202.065 1.00 0.01 N
ATOM 15 C8 A A 513 -30.445 142.099 203.188 1.00 0.01 C
ATOM 16 N7 A A 513 -29.169 141.968 202.939 1.00 0.01 N
ATOM 17 C5 A A 513 -29.107 141.796 201.574 1.00 0.01 C
ATOM 18 C6 A A 513 -28.039 141.594 200.728 1.00 0.01 C
ATOM 19 N6 A A 513 -26.786 141.544 201.144 1.00 0.01 N
ATOM 20 N1 A A 513 -28.303 141.429 199.427 1.00 0.01 N
ATOM 21 C2 A A 513 -29.565 141.489 199.016 1.00 0.01 C
ATOM 22 N3 A A 513 -30.661 141.676 199.733 1.00 0.01 N
ATOM 23 C4 A A 513 -30.355 141.818 201.020 1.00 0.01 C
ATOM 24 P A A 514 -34.010 137.995 204.005 1.00 0.01 P
ATOM 25 OP1 A A 514 -35.151 137.401 204.722 1.00 0.01 O
ATOM 26 OP2 A A 514 -32.737 138.179 204.711 1.00 0.01 O
ATOM 27 O5' A A 514 -33.791 137.237 202.642 1.00 0.01 O
TER
ATOM 1 O3' U B 24 -20.085 136.887 201.769 1.00 5.15 O
ATOM 2 P G B 25 -19.209 138.203 201.473 1.00 0.07 P
ATOM 3 OP1 G B 25 -18.206 137.816 200.455 1.00 0.07 O
ATOM 4 OP2 G B 25 -18.734 138.729 202.770 1.00 0.07 O
ATOM 5 O5' G B 25 -20.251 139.224 200.845 1.00 0.07 O
ATOM 6 C5' G B 25 -21.120 138.832 199.809 1.00 0.07 C
ATOM 7 C4' G B 25 -22.388 139.605 199.880 1.00 0.07 C
ATOM 8 O4' G B 25 -23.057 139.321 201.130 1.00 0.07 O
ATOM 9 C3' G B 25 -22.219 141.103 199.893 1.00 0.07 C
ATOM 10 O3' G B 25 -22.035 141.627 198.609 1.00 0.07 O
ATOM 11 C2' G B 25 -23.489 141.584 200.564 1.00 0.07 C
ATOM 12 O2' G B 25 -24.560 141.611 199.642 1.00 0.07 O
ATOM 13 C1' G B 25 -23.737 140.468 201.578 1.00 0.07 C
ATOM 14 N9 G B 25 -23.236 140.809 202.917 1.00 0.09 N
ATOM 15 C8 G B 25 -21.962 140.702 203.417 1.00 0.09 C
ATOM 16 N7 G B 25 -21.842 141.076 204.667 1.00 0.09 N
ATOM 17 C5 G B 25 -23.136 141.453 204.997 1.00 0.09 C
ATOM 18 C6 G B 25 -23.673 141.960 206.201 1.00 0.09 C
ATOM 19 O6 G B 25 -23.141 142.211 207.291 1.00 0.09 O
ATOM 20 N1 G B 25 -25.017 142.196 206.073 1.00 0.09 N
ATOM 21 C2 G B 25 -25.771 141.990 204.963 1.00 0.09 C
ATOM 22 N2 G B 25 -27.068 142.289 205.092 1.00 0.09 N
ATOM 23 N3 G B 25 -25.300 141.531 203.838 1.00 0.09 N
ATOM 24 C4 G B 25 -23.992 141.289 203.933 1.00 0.09 C
ATOM 25 P G B 26 -20.924 142.726 198.369 1.00 0.01 P
ATOM 26 OP1 G B 26 -20.598 142.715 196.946 1.00 0.01 O
ATOM 27 OP2 G B 26 -19.854 142.466 199.332 1.00 0.01 O
ATOM 28 O5' G B 26 -21.698 144.060 198.734 1.00 0.01 O
TER
Atoms:
OP1: (-33.337,141.381,208.215)
OP2: (-30.861,141.396,207.699)
C3': (-33.517,140.435,203.325)
C1': (-32.661,142.140,202.006)
C5': (-33.870,141.931,205.377)
O4': (-33.097,142.703,203.219)
C8: (-30.445,142.099,203.188)
O2': (-34.604,140.984,201.271)
C6: (-28.039,141.594,200.728)
C5: (-29.107,141.796,201.574)
C4: (-30.355,141.818,201.020)
P: (-32.237,141.862,207.389)
C4': (-33.962,141.765,203.887)
C2': (-33.337,140.789,201.878)
C2: (-29.565,141.489,199.016)
N1: (-28.303,141.429,199.427)
N3: (-30.661,141.676,199.733)
N6: (-26.786,141.544,201.144)
N7: (-29.169,141.968,202.939)
N9: (-31.209,142.014,202.065)
O5': (-32.583,141.604,205.868)
O3': (-34.465,139.426,203.517)
OP2: (-30.861,141.396,207.699)
C3': (-33.517,140.435,203.325)
C1': (-32.661,142.140,202.006)
C5': (-33.870,141.931,205.377)
O4': (-33.097,142.703,203.219)
C8: (-30.445,142.099,203.188)
O2': (-34.604,140.984,201.271)
C6: (-28.039,141.594,200.728)
C5: (-29.107,141.796,201.574)
C4: (-30.355,141.818,201.020)
P: (-32.237,141.862,207.389)
C4': (-33.962,141.765,203.887)
C2': (-33.337,140.789,201.878)
C2: (-29.565,141.489,199.016)
N1: (-28.303,141.429,199.427)
N3: (-30.661,141.676,199.733)
N6: (-26.786,141.544,201.144)
N7: (-29.169,141.968,202.939)
N9: (-31.209,142.014,202.065)
O5': (-32.583,141.604,205.868)
O3': (-34.465,139.426,203.517)
OP1: (-18.206,137.816,200.455)
OP2: (-18.734,138.729,202.770)
C3': (-22.219,141.103,199.893)
C1': (-23.737,140.468,201.578)
C5': (-21.120,138.832,199.809)
O6: (-23.141,142.211,207.291)
O4': (-23.057,139.321,201.130)
C8: (-21.962,140.702,203.417)
C2: (-25.771,141.990,204.963)
C6: (-23.673,141.960,206.201)
C5: (-23.136,141.453,204.997)
C4: (-23.992,141.289,203.933)
P: (-19.209,138.203,201.473)
C4': (-22.388,139.605,199.880)
C2': (-23.489,141.584,200.564)
O2': (-24.560,141.611,199.642)
N1: (-25.017,142.196,206.073)
N2: (-27.068,142.289,205.092)
N3: (-25.300,141.531,203.838)
N7: (-21.842,141.076,204.667)
N9: (-23.236,140.809,202.917)
O5': (-20.251,139.224,200.845)
O3': (-22.035,141.627,198.609)
OP2: (-18.734,138.729,202.770)
C3': (-22.219,141.103,199.893)
C1': (-23.737,140.468,201.578)
C5': (-21.120,138.832,199.809)
O6: (-23.141,142.211,207.291)
O4': (-23.057,139.321,201.130)
C8: (-21.962,140.702,203.417)
C2: (-25.771,141.990,204.963)
C6: (-23.673,141.960,206.201)
C5: (-23.136,141.453,204.997)
C4: (-23.992,141.289,203.933)
P: (-19.209,138.203,201.473)
C4': (-22.388,139.605,199.880)
C2': (-23.489,141.584,200.564)
O2': (-24.560,141.611,199.642)
N1: (-25.017,142.196,206.073)
N2: (-27.068,142.289,205.092)
N3: (-25.300,141.531,203.838)
N7: (-21.842,141.076,204.667)
N9: (-23.236,140.809,202.917)
O5': (-20.251,139.224,200.845)
O3': (-22.035,141.627,198.609)
Image (generated by PyMOL):