ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A378:A359

Extra

PDB:
ATOM 1 O3' U A 377 125.796 58.358 15.422 1.00 50.75 O
ATOM 2 P G A 378 126.834 58.323 16.644 1.00 45.97 P
ATOM 3 OP1 G A 378 127.273 56.908 16.807 1.00 44.59 O
ATOM 4 OP2 G A 378 126.225 59.025 17.790 1.00 44.59 O
ATOM 5 O5' G A 378 128.060 59.196 16.128 1.00 45.97 O
ATOM 6 C5' G A 378 127.987 60.635 16.104 1.00 45.97 C
ATOM 7 C4' G A 378 129.334 61.204 15.747 1.00 45.97 C
ATOM 8 O4' G A 378 130.317 60.591 16.620 1.00 45.97 O
ATOM 9 C3' G A 378 129.786 60.900 14.327 1.00 45.97 C
ATOM 10 O3' G A 378 130.648 61.949 13.909 1.00 45.97 O
ATOM 11 C2' G A 378 130.614 59.638 14.491 1.00 45.97 C
ATOM 12 O2' G A 378 131.581 59.494 13.478 1.00 45.97 O
ATOM 13 C1' G A 378 131.262 59.875 15.856 1.00 45.97 C
ATOM 14 N9 G A 378 131.564 58.649 16.580 1.00 44.59 N
ATOM 15 C8 G A 378 130.763 57.538 16.690 1.00 44.59 C
ATOM 16 N7 G A 378 131.298 56.595 17.413 1.00 44.59 N
ATOM 17 C5 G A 378 132.522 57.112 17.802 1.00 44.59 C
ATOM 18 C6 G A 378 133.525 56.550 18.602 1.00 44.59 C
ATOM 19 O6 G A 378 133.545 55.446 19.141 1.00 44.59 O
ATOM 20 N1 G A 378 134.592 57.412 18.763 1.00 44.59 N
ATOM 21 C2 G A 378 134.677 58.659 18.224 1.00 44.59 C
ATOM 22 N2 G A 378 135.795 59.342 18.527 1.00 44.59 N
ATOM 23 N3 G A 378 133.746 59.202 17.460 1.00 44.59 N
ATOM 24 C4 G A 378 132.703 58.378 17.295 1.00 44.59 C
ATOM 25 P A A 379 130.482 62.589 12.454 1.00 44.27 P
ATOM 26 OP1 A A 379 130.433 61.482 11.473 1.00 46.89 O
ATOM 27 OP2 A A 379 131.518 63.644 12.314 1.00 46.89 O
ATOM 28 O5' A A 379 129.055 63.301 12.504 1.00 44.27 O
TER

ATOM 1 O3' U B 358 139.103 57.691 21.317 1.00 56.40 O
ATOM 2 P C B 359 137.592 57.483 21.811 1.00 52.92 P
ATOM 3 OP1 C B 359 137.420 56.092 22.290 1.00 71.33 O
ATOM 4 OP2 C B 359 136.684 58.016 20.764 1.00 71.33 O
ATOM 5 O5' C B 359 137.489 58.454 23.061 1.00 52.92 O
ATOM 6 C5' C B 359 138.217 58.193 24.269 1.00 52.92 C
ATOM 7 C4' C B 359 137.781 59.162 25.340 1.00 52.92 C
ATOM 8 O4' C B 359 138.212 60.501 24.978 1.00 52.92 O
ATOM 9 C3' C B 359 136.274 59.259 25.513 1.00 52.92 C
ATOM 10 O3' C B 359 135.806 58.285 26.436 1.00 52.92 O
ATOM 11 C2' C B 359 136.088 60.676 26.028 1.00 52.92 C
ATOM 12 O2' C B 359 136.326 60.739 27.412 1.00 52.92 O
ATOM 13 C1' C B 359 137.200 61.434 25.297 1.00 52.92 C
ATOM 14 N1 C B 359 136.779 62.106 24.043 1.00 71.33 N
ATOM 15 C2 C B 359 135.803 63.120 24.098 1.00 71.33 C
ATOM 16 O2 C B 359 135.307 63.424 25.192 1.00 71.33 O
ATOM 17 N3 C B 359 135.429 63.741 22.956 1.00 71.33 N
ATOM 18 C4 C B 359 135.978 63.391 21.795 1.00 71.33 C
ATOM 19 N4 C B 359 135.569 64.026 20.699 1.00 71.33 N
ATOM 20 C5 C B 359 136.968 62.369 21.706 1.00 71.33 C
ATOM 21 C6 C B 359 137.333 61.757 22.841 1.00 71.33 C
ATOM 22 P C B 360 134.251 57.877 26.449 1.00 59.69 P
ATOM 23 OP1 C B 360 134.038 56.852 27.505 1.00 64.12 O
ATOM 24 OP2 C B 360 133.820 57.596 25.061 1.00 64.12 O
ATOM 25 O5' C B 360 133.519 59.212 26.900 1.00 59.69 O
TER

Atoms:
OP1: (127.273,56.908,16.807)
OP2: (126.225,59.025,17.790)
C3': (129.786,60.900,14.327)
C1': (131.262,59.875,15.856)
C5': (127.987,60.635,16.104)
O6: (133.545,55.446,19.141)
O4': (130.317,60.591,16.620)
C8: (130.763,57.538,16.690)
C2: (134.677,58.659,18.224)
C6: (133.525,56.550,18.602)
C5: (132.522,57.112,17.802)
C4: (132.703,58.378,17.295)
P: (126.834,58.323,16.644)
C4': (129.334,61.204,15.747)
C2': (130.614,59.638,14.491)
O2': (131.581,59.494,13.478)
N1: (134.592,57.412,18.763)
N2: (135.795,59.342,18.527)
N3: (133.746,59.202,17.460)
N7: (131.298,56.595,17.413)
N9: (131.564,58.649,16.580)
O5': (128.060,59.196,16.128)
O3': (130.648,61.949,13.909)
C2: (135.803,63.120,24.098)
OP1: (137.420,56.092,22.290)
OP2: (136.684,58.016,20.764)
C4: (135.978,63.391,21.795)
O5': (137.489,58.454,23.061)
C3': (136.274,59.259,25.513)
C1': (137.200,61.434,25.297)
O4': (138.212,60.501,24.978)
C5': (138.217,58.193,24.269)
P: (137.592,57.483,21.811)
O2: (135.307,63.424,25.192)
C4': (137.781,59.162,25.340)
C2': (136.088,60.676,26.028)
O2': (136.326,60.739,27.412)
N1: (136.779,62.106,24.043)
N3: (135.429,63.741,22.956)
N4: (135.569,64.026,20.699)
C6: (137.333,61.757,22.841)
C5: (136.968,62.369,21.706)
O3': (135.806,58.285,26.436)
Image (generated by PyMOL):
PyMOL image
show in jmol