Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01392:01354
Extra
PDB:
ATOM 1 O3' U A1391 48.228 165.149 83.820 1.00 33.83 O
ATOM 2 P G A1392 47.863 165.641 82.334 1.00 36.23 P
ATOM 3 OP1 G A1392 46.471 165.181 82.052 1.00 31.63 O
ATOM 4 OP2 G A1392 48.966 165.262 81.419 1.00 34.04 O
ATOM 5 O5' G A1392 47.852 167.226 82.445 1.00 33.24 O
ATOM 6 C5' G A1392 46.857 167.900 83.221 1.00 33.78 C
ATOM 7 C4' G A1392 47.092 169.384 83.170 1.00 35.89 C
ATOM 8 O4' G A1392 48.307 169.707 83.893 1.00 35.76 O
ATOM 9 C3' G A1392 47.340 169.956 81.784 1.00 35.88 C
ATOM 10 O3' G A1392 46.127 170.177 81.085 1.00 38.72 O
ATOM 11 C2' G A1392 48.061 171.252 82.104 1.00 34.65 C
ATOM 12 O2' G A1392 47.173 172.234 82.583 1.00 35.07 O
ATOM 13 C1' G A1392 48.935 170.820 83.278 1.00 35.80 C
ATOM 14 N9 G A1392 50.308 170.472 82.915 1.00 36.69 N
ATOM 15 C8 G A1392 50.875 169.221 82.820 1.00 36.05 C
ATOM 16 N7 G A1392 52.146 169.258 82.523 1.00 37.25 N
ATOM 17 C5 G A1392 52.431 170.615 82.411 1.00 40.06 C
ATOM 18 C6 G A1392 53.656 171.287 82.121 1.00 42.19 C
ATOM 19 O6 G A1392 54.782 170.806 81.945 1.00 46.15 O
ATOM 20 N1 G A1392 53.480 172.664 82.060 1.00 41.62 N
ATOM 21 C2 G A1392 52.294 173.317 82.272 1.00 41.01 C
ATOM 22 N2 G A1392 52.319 174.654 82.134 1.00 42.10 N
ATOM 23 N3 G A1392 51.164 172.711 82.585 1.00 37.85 N
ATOM 24 C4 G A1392 51.303 171.371 82.629 1.00 37.22 C
ATOM 25 P A A1393 46.127 170.185 79.477 1.00 40.46 P
ATOM 26 OP1 A A1393 44.730 170.443 79.058 1.00 42.38 O
ATOM 27 OP2 A A1393 46.849 169.004 78.943 1.00 41.21 O
ATOM 28 O5' A A1393 47.012 171.448 79.109 1.00 40.07 O
TER
ATOM 1 O3' C B1353 55.892 176.581 82.859 1.00 37.38 O
ATOM 2 P C B1354 56.008 175.817 81.457 1.00 37.85 P
ATOM 3 OP1 C B1354 54.780 175.014 81.258 1.00 40.61 O
ATOM 4 OP2 C B1354 57.325 175.148 81.430 1.00 37.81 O
ATOM 5 O5' C B1354 56.012 177.005 80.399 1.00 36.50 O
ATOM 6 C5' C B1354 56.207 176.746 79.010 1.00 36.12 C
ATOM 7 C4' C B1354 55.779 177.937 78.199 1.00 36.88 C
ATOM 8 O4' C B1354 54.358 178.151 78.373 1.00 36.85 O
ATOM 9 C3' C B1354 56.393 179.268 78.590 1.00 37.55 C
ATOM 10 O3' C B1354 57.688 179.425 78.032 1.00 37.31 O
ATOM 11 C2' C B1354 55.396 180.251 78.000 1.00 38.55 C
ATOM 12 O2' C B1354 55.535 180.384 76.598 1.00 42.16 O
ATOM 13 C1' C B1354 54.078 179.536 78.290 1.00 37.45 C
ATOM 14 N1 C B1354 53.447 179.968 79.547 1.00 37.89 N
ATOM 15 C2 C B1354 52.848 181.231 79.593 1.00 38.85 C
ATOM 16 O2 C B1354 52.898 181.957 78.586 1.00 41.96 O
ATOM 17 N3 C B1354 52.235 181.628 80.728 1.00 37.30 N
ATOM 18 C4 C B1354 52.210 180.823 81.791 1.00 35.81 C
ATOM 19 N4 C B1354 51.576 181.251 82.883 1.00 34.27 N
ATOM 20 C5 C B1354 52.828 179.542 81.779 1.00 35.33 C
ATOM 21 C6 C B1354 53.430 179.158 80.648 1.00 36.53 C
ATOM 22 P C B1355 58.829 180.172 78.877 1.00 39.16 P
ATOM 23 OP1 C B1355 60.119 179.909 78.198 1.00 40.79 O
ATOM 24 OP2 C B1355 58.663 179.814 80.305 1.00 39.96 O
ATOM 25 O5' C B1355 58.493 181.717 78.689 1.00 39.92 O
TER
ATOM 2 P G A1392 47.863 165.641 82.334 1.00 36.23 P
ATOM 3 OP1 G A1392 46.471 165.181 82.052 1.00 31.63 O
ATOM 4 OP2 G A1392 48.966 165.262 81.419 1.00 34.04 O
ATOM 5 O5' G A1392 47.852 167.226 82.445 1.00 33.24 O
ATOM 6 C5' G A1392 46.857 167.900 83.221 1.00 33.78 C
ATOM 7 C4' G A1392 47.092 169.384 83.170 1.00 35.89 C
ATOM 8 O4' G A1392 48.307 169.707 83.893 1.00 35.76 O
ATOM 9 C3' G A1392 47.340 169.956 81.784 1.00 35.88 C
ATOM 10 O3' G A1392 46.127 170.177 81.085 1.00 38.72 O
ATOM 11 C2' G A1392 48.061 171.252 82.104 1.00 34.65 C
ATOM 12 O2' G A1392 47.173 172.234 82.583 1.00 35.07 O
ATOM 13 C1' G A1392 48.935 170.820 83.278 1.00 35.80 C
ATOM 14 N9 G A1392 50.308 170.472 82.915 1.00 36.69 N
ATOM 15 C8 G A1392 50.875 169.221 82.820 1.00 36.05 C
ATOM 16 N7 G A1392 52.146 169.258 82.523 1.00 37.25 N
ATOM 17 C5 G A1392 52.431 170.615 82.411 1.00 40.06 C
ATOM 18 C6 G A1392 53.656 171.287 82.121 1.00 42.19 C
ATOM 19 O6 G A1392 54.782 170.806 81.945 1.00 46.15 O
ATOM 20 N1 G A1392 53.480 172.664 82.060 1.00 41.62 N
ATOM 21 C2 G A1392 52.294 173.317 82.272 1.00 41.01 C
ATOM 22 N2 G A1392 52.319 174.654 82.134 1.00 42.10 N
ATOM 23 N3 G A1392 51.164 172.711 82.585 1.00 37.85 N
ATOM 24 C4 G A1392 51.303 171.371 82.629 1.00 37.22 C
ATOM 25 P A A1393 46.127 170.185 79.477 1.00 40.46 P
ATOM 26 OP1 A A1393 44.730 170.443 79.058 1.00 42.38 O
ATOM 27 OP2 A A1393 46.849 169.004 78.943 1.00 41.21 O
ATOM 28 O5' A A1393 47.012 171.448 79.109 1.00 40.07 O
TER
ATOM 1 O3' C B1353 55.892 176.581 82.859 1.00 37.38 O
ATOM 2 P C B1354 56.008 175.817 81.457 1.00 37.85 P
ATOM 3 OP1 C B1354 54.780 175.014 81.258 1.00 40.61 O
ATOM 4 OP2 C B1354 57.325 175.148 81.430 1.00 37.81 O
ATOM 5 O5' C B1354 56.012 177.005 80.399 1.00 36.50 O
ATOM 6 C5' C B1354 56.207 176.746 79.010 1.00 36.12 C
ATOM 7 C4' C B1354 55.779 177.937 78.199 1.00 36.88 C
ATOM 8 O4' C B1354 54.358 178.151 78.373 1.00 36.85 O
ATOM 9 C3' C B1354 56.393 179.268 78.590 1.00 37.55 C
ATOM 10 O3' C B1354 57.688 179.425 78.032 1.00 37.31 O
ATOM 11 C2' C B1354 55.396 180.251 78.000 1.00 38.55 C
ATOM 12 O2' C B1354 55.535 180.384 76.598 1.00 42.16 O
ATOM 13 C1' C B1354 54.078 179.536 78.290 1.00 37.45 C
ATOM 14 N1 C B1354 53.447 179.968 79.547 1.00 37.89 N
ATOM 15 C2 C B1354 52.848 181.231 79.593 1.00 38.85 C
ATOM 16 O2 C B1354 52.898 181.957 78.586 1.00 41.96 O
ATOM 17 N3 C B1354 52.235 181.628 80.728 1.00 37.30 N
ATOM 18 C4 C B1354 52.210 180.823 81.791 1.00 35.81 C
ATOM 19 N4 C B1354 51.576 181.251 82.883 1.00 34.27 N
ATOM 20 C5 C B1354 52.828 179.542 81.779 1.00 35.33 C
ATOM 21 C6 C B1354 53.430 179.158 80.648 1.00 36.53 C
ATOM 22 P C B1355 58.829 180.172 78.877 1.00 39.16 P
ATOM 23 OP1 C B1355 60.119 179.909 78.198 1.00 40.79 O
ATOM 24 OP2 C B1355 58.663 179.814 80.305 1.00 39.96 O
ATOM 25 O5' C B1355 58.493 181.717 78.689 1.00 39.92 O
TER
Atoms:
OP1: (46.471,165.181,82.052)
OP2: (48.966,165.262,81.419)
C3': (47.340,169.956,81.784)
C1': (48.935,170.820,83.278)
C5': (46.857,167.900,83.221)
O6: (54.782,170.806,81.945)
O4': (48.307,169.707,83.893)
C8: (50.875,169.221,82.820)
C2: (52.294,173.317,82.272)
C6: (53.656,171.287,82.121)
C5: (52.431,170.615,82.411)
C4: (51.303,171.371,82.629)
P: (47.863,165.641,82.334)
C4': (47.092,169.384,83.170)
C2': (48.061,171.252,82.104)
O2': (47.173,172.234,82.583)
N1: (53.480,172.664,82.060)
N2: (52.319,174.654,82.134)
N3: (51.164,172.711,82.585)
N7: (52.146,169.258,82.523)
N9: (50.308,170.472,82.915)
O5': (47.852,167.226,82.445)
O3': (46.127,170.177,81.085)
OP2: (48.966,165.262,81.419)
C3': (47.340,169.956,81.784)
C1': (48.935,170.820,83.278)
C5': (46.857,167.900,83.221)
O6: (54.782,170.806,81.945)
O4': (48.307,169.707,83.893)
C8: (50.875,169.221,82.820)
C2: (52.294,173.317,82.272)
C6: (53.656,171.287,82.121)
C5: (52.431,170.615,82.411)
C4: (51.303,171.371,82.629)
P: (47.863,165.641,82.334)
C4': (47.092,169.384,83.170)
C2': (48.061,171.252,82.104)
O2': (47.173,172.234,82.583)
N1: (53.480,172.664,82.060)
N2: (52.319,174.654,82.134)
N3: (51.164,172.711,82.585)
N7: (52.146,169.258,82.523)
N9: (50.308,170.472,82.915)
O5': (47.852,167.226,82.445)
O3': (46.127,170.177,81.085)
C2: (52.848,181.231,79.593)
OP1: (54.780,175.014,81.258)
OP2: (57.325,175.148,81.430)
C4: (52.210,180.823,81.791)
O5': (56.012,177.005,80.399)
C3': (56.393,179.268,78.590)
C1': (54.078,179.536,78.290)
O4': (54.358,178.151,78.373)
C5': (56.207,176.746,79.010)
P: (56.008,175.817,81.457)
O2: (52.898,181.957,78.586)
C4': (55.779,177.937,78.199)
C2': (55.396,180.251,78.000)
O2': (55.535,180.384,76.598)
N1: (53.447,179.968,79.547)
N3: (52.235,181.628,80.728)
N4: (51.576,181.251,82.883)
C6: (53.430,179.158,80.648)
C5: (52.828,179.542,81.779)
O3': (57.688,179.425,78.032)
OP1: (54.780,175.014,81.258)
OP2: (57.325,175.148,81.430)
C4: (52.210,180.823,81.791)
O5': (56.012,177.005,80.399)
C3': (56.393,179.268,78.590)
C1': (54.078,179.536,78.290)
O4': (54.358,178.151,78.373)
C5': (56.207,176.746,79.010)
P: (56.008,175.817,81.457)
O2: (52.898,181.957,78.586)
C4': (55.779,177.937,78.199)
C2': (55.396,180.251,78.000)
O2': (55.535,180.384,76.598)
N1: (53.447,179.968,79.547)
N3: (52.235,181.628,80.728)
N4: (51.576,181.251,82.883)
C6: (53.430,179.158,80.648)
C5: (52.828,179.542,81.779)
O3': (57.688,179.425,78.032)
Image (generated by PyMOL):